RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 PKDCCQ504Y2 493 aa7.17□□□□□ -1.26
LINC01239-201ENST00000433645 ERICH6Q7L0X2 663 aa7.17□□□□□ -1.26
LINC01239-201ENST00000433645 VASH1Q7L8A9 365 aaPredicted RBP7.17□□□□□ -1.26
LINC01239-201ENST00000433645 FAM187AA6NFU0 413 aa7.16□□□□□ -1.26
LINC01239-201ENST00000433645 ESPNB1AK53 854 aa7.16□□□□□ -1.26
LINC01239-201ENST00000433645 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
LINC01239-201ENST00000433645 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
LINC01239-201ENST00000433645 KCTD15Q96SI1 283 aaPredicted RBP7.16□□□□□ -1.26
LINC01239-201ENST00000433645 ARID5BQ14865 1188 aa7.15□□□□□ -1.26
LINC01239-201ENST00000433645 FNBP4Q8N3X1 1017 aaPredicted RBP7.15□□□□□ -1.26
LINC01239-201ENST00000433645 NNTQ13423 1086 aa7.14□□□□□ -1.27
LINC01239-201ENST00000433645 RNF20Q5VTR2 975 aa7.14□□□□□ -1.27
LINC01239-201ENST00000433645 PROSER2Q86WR7 435 aaPredicted RBP7.14□□□□□ -1.27
LINC01239-201ENST00000433645 PCDHB9Q9Y5E1 797 aa7.14□□□□□ -1.27
LINC01239-201ENST00000433645 CCDC116Q8IYX3 515 aa7.13□□□□□ -1.27
LINC01239-201ENST00000433645 KLF16Q9BXK1 252 aaPredicted RBP7.13□□□□□ -1.27
LINC01239-201ENST00000433645 EMILIN1Q9Y6C2 1016 aa7.13□□□□□ -1.27
LINC01239-201ENST00000433645 FSHRP23945 695 aa7.12□□□□□ -1.27
LINC01239-201ENST00000433645 MYT1Q01538 1121 aa7.12□□□□□ -1.27
LINC01239-201ENST00000433645 VAC14Q08AM6 782 aa7.12□□□□□ -1.27
LINC01239-201ENST00000433645 Q6ZNB5 142 aa7.12□□□□□ -1.27
LINC01239-201ENST00000433645 HPS1Q92902 700 aa7.12□□□□□ -1.27
LINC01239-201ENST00000433645 CLUAP1Q96AJ1 413 aa7.12□□□□□ -1.27
LINC01239-201ENST00000433645 NR3C2P08235 984 aa7.11□□□□□ -1.27
LINC01239-201ENST00000433645 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
LINC01239-201ENST00000433645 INTS6LQ5JSJ4 861 aaKnown RBP7.11□□□□□ -1.27
LINC01239-201ENST00000433645 TRAF7Q6Q0C0 670 aa7.11□□□□□ -1.27
LINC01239-201ENST00000433645 ALG2Q9H553 416 aa7.11□□□□□ -1.27
LINC01239-201ENST00000433645 CEP126Q9P2H0 1117 aa7.11□□□□□ -1.27
LINC01239-201ENST00000433645 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
LINC01239-201ENST00000433645 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
LINC01239-201ENST00000433645 AXIN1O15169 862 aa7.09□□□□□ -1.27
LINC01239-201ENST00000433645 GIGYF1O75420 1035 aaPredicted RBP7.09□□□□□ -1.27
LINC01239-201ENST00000433645 TIMP2P16035 220 aa7.09□□□□□ -1.27
LINC01239-201ENST00000433645 PPP1R26Q5T8A7 1209 aaPredicted RBP7.09□□□□□ -1.27
LINC01239-201ENST00000433645 PHTF2Q8N3S3 785 aa7.09□□□□□ -1.27
LINC01239-201ENST00000433645 AAASQ9NRG9 546 aa7.09□□□□□ -1.27
LINC01239-201ENST00000433645 CHIC2Q9UKJ5 165 aa7.09□□□□□ -1.27
LINC01239-201ENST00000433645 CAPN5O15484 640 aaPredicted RBP7.08□□□□□ -1.28
LINC01239-201ENST00000433645 TRAK2O60296 914 aa7.08□□□□□ -1.28
LINC01239-201ENST00000433645 WDR4P57081 412 aaKnown RBP7.08□□□□□ -1.28
LINC01239-201ENST00000433645 NFATC2IPQ8NCF5 419 aa7.08□□□□□ -1.28
LINC01239-201ENST00000433645 ERVH48-1M5A8F1 160 aa7.07□□□□□ -1.28
LINC01239-201ENST00000433645 ZIC2O95409 532 aaPredicted RBP7.06□□□□□ -1.28
LINC01239-201ENST00000433645 MAP7D1Q3KQU3 841 aa7.06□□□□□ -1.28
LINC01239-201ENST00000433645 SLFNL1Q499Z3 407 aa7.06□□□□□ -1.28
LINC01239-201ENST00000433645 Q6ZVU0 165 aa7.06□□□□□ -1.28
LINC01239-201ENST00000433645 ITPKCQ96DU7 683 aa7.06□□□□□ -1.28
LINC01239-201ENST00000433645 LZTS3O60299 673 aaPredicted RBP7.05□□□□□ -1.28
LINC01239-201ENST00000433645 POM121CA8CG34 1229 aa7.04□□□□□ -1.28
LINC01239-201ENST00000433645 LCE2BO14633 110 aa7.04□□□□□ -1.28
LINC01239-201ENST00000433645 ERVK-9P63128 1117 aa7.04□□□□□ -1.28
LINC01239-201ENST00000433645 RNF135Q8IUD6 432 aa7.04□□□□□ -1.28
LINC01239-201ENST00000433645 MEIOBQ8N635 442 aa7.04□□□□□ -1.28
LINC01239-201ENST00000433645 ADAMTS19Q8TE59 1207 aa7.04□□□□□ -1.28
LINC01239-201ENST00000433645 LILRA1O75019 489 aa7.03□□□□□ -1.28
LINC01239-201ENST00000433645 HDGFL1Q5TGJ6 251 aa7.03□□□□□ -1.28
LINC01239-201ENST00000433645 ZNF784Q8NCA9 323 aaPredicted RBP7.03□□□□□ -1.28
LINC01239-201ENST00000433645 SIRT1Q96EB6 747 aa7.03□□□□□ -1.28
LINC01239-201ENST00000433645 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
LINC01239-201ENST00000433645 ST8SIA5O15466 376 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 CC2D2BQ6DHV5 1058 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 C14orf37Q86TY3 774 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 GLMNQ92990 594 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 TSEN34Q9BSV6 310 aaKnown RBP7.02□□□□□ -1.29
LINC01239-201ENST00000433645 SENP2Q9HC62 589 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 ATP13A2Q9NQ11 1180 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 PCDHB11Q9Y5F2 797 aa7.02□□□□□ -1.29
LINC01239-201ENST00000433645 USP4Q13107 963 aa7.01□□□□□ -1.29
LINC01239-201ENST00000433645 MRPL14Q6P1L8 145 aaKnown RBP7.01□□□□□ -1.29
LINC01239-201ENST00000433645 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
LINC01239-201ENST00000433645 CCDC85AQ96PX6 553 aaPredicted RBP7.01□□□□□ -1.29
LINC01239-201ENST00000433645 TMPRSS4Q9NRS4 437 aa7.01□□□□□ -1.29
LINC01239-201ENST00000433645 DOLKQ9UPQ8 538 aa7.01□□□□□ -1.29
LINC01239-201ENST00000433645 UPP2O95045 317 aa7□□□□□ -1.29
LINC01239-201ENST00000433645 RAB15P59190 212 aa7□□□□□ -1.29
LINC01239-201ENST00000433645 PLPP7Q8NBV4 271 aa7□□□□□ -1.29
LINC01239-201ENST00000433645 MYCP01106 439 aaPredicted RBP6.99□□□□□ -1.29
LINC01239-201ENST00000433645 ADH1AP07327 375 aa6.99□□□□□ -1.29
LINC01239-201ENST00000433645 SCARF1Q14162 830 aa6.99□□□□□ -1.29
LINC01239-201ENST00000433645 CYP2U1Q7Z449 544 aa6.99□□□□□ -1.29
LINC01239-201ENST00000433645 TRIM46Q7Z4K8 759 aa6.99□□□□□ -1.29
LINC01239-201ENST00000433645 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
LINC01239-201ENST00000433645 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
LINC01239-201ENST00000433645 CALR3Q96L12 384 aaKnown RBP6.99□□□□□ -1.29
LINC01239-201ENST00000433645 ATP9BO43861 1147 aa6.98□□□□□ -1.29
LINC01239-201ENST00000433645 ADD1P35611 737 aaKnown RBP6.98□□□□□ -1.29
LINC01239-201ENST00000433645 UCN2Q96RP3 112 aa6.98□□□□□ -1.29
LINC01239-201ENST00000433645 ESF1Q9H501 851 aaKnown RBP6.98□□□□□ -1.29
LINC01239-201ENST00000433645 CYLDQ9NQC7 956 aa6.98□□□□□ -1.29
LINC01239-201ENST00000433645 SPINT1O43278 529 aa6.97□□□□□ -1.29
LINC01239-201ENST00000433645 SKIP12755 728 aa6.97□□□□□ -1.29
LINC01239-201ENST00000433645 CBLBQ13191 982 aa6.97□□□□□ -1.29
LINC01239-201ENST00000433645 TRIM47Q96LD4 638 aa6.97□□□□□ -1.29
LINC01239-201ENST00000433645 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
LINC01239-201ENST00000433645 DACH1Q9UI36 760 aa6.97□□□□□ -1.29
LINC01239-201ENST00000433645 ZNF777Q9ULD5 760 aaPredicted RBP6.97□□□□□ -1.29
LINC01239-201ENST00000433645 ATP5J2-PTCD1G3V325 749 aa6.96□□□□□ -1.3
LINC01239-201ENST00000433645 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
LINC01239-201ENST00000433645 GNRH1P01148 92 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms