RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
HDAC9-212ENST00000432645 NUTM2GQ5VZR2 741 aa10.72□□□□□ -0.69
HDAC9-212ENST00000432645 USP6P35125 1406 aa10.72□□□□□ -0.69
HDAC9-212ENST00000432645 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
HDAC9-212ENST00000432645 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
HDAC9-212ENST00000432645 PTCH1Q13635 1447 aa10.71□□□□□ -0.69
HDAC9-212ENST00000432645 HSP90AB2PQ58FF8 381 aa10.71□□□□□ -0.69
HDAC9-212ENST00000432645 MON2Q7Z3U7 1717 aa10.71□□□□□ -0.7
HDAC9-212ENST00000432645 RLBP1P12271 317 aa10.71□□□□□ -0.7
HDAC9-212ENST00000432645 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.7
HDAC9-212ENST00000432645 ITSN1Q15811 1721 aa10.71□□□□□ -0.7
HDAC9-212ENST00000432645 PDE3AQ14432 1141 aa10.7□□□□□ -0.7
HDAC9-212ENST00000432645 EIF4A2Q14240 407 aaKnown RBP10.7□□□□□ -0.7
HDAC9-212ENST00000432645 AKAP12Q02952 1782 aa10.7□□□□□ -0.7
HDAC9-212ENST00000432645 CDK12Q9NYV4 1490 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-212ENST00000432645 NFE2L2Q16236 605 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 SULT6B1Q6IMI4 303 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 KDM2BQ8NHM5 1336 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 FAM83GA6ND36 823 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 BRD2P25440 801 aaKnown RBP10.69□□□□□ -0.7
HDAC9-212ENST00000432645 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 DIP2AQ14689 1571 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 DCTN1Q14203 1278 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
HDAC9-212ENST00000432645 TCERG1O14776 1098 aaKnown RBP10.68□□□□□ -0.7
HDAC9-212ENST00000432645 NLRP6P59044 892 aa10.68□□□□□ -0.7
HDAC9-212ENST00000432645 CENPQQ7L2Z9 268 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-212ENST00000432645 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
HDAC9-212ENST00000432645 OVOS2A0A0J9YW53 1432 aa10.68□□□□□ -0.7
HDAC9-212ENST00000432645 OVOS2Q6IE36 1432 aa10.68□□□□□ -0.7
HDAC9-212ENST00000432645 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-212ENST00000432645 IGHDP01880 384 aa10.67□□□□□ -0.7
HDAC9-212ENST00000432645 VSIG10Q8N0Z9 540 aa10.67□□□□□ -0.7
HDAC9-212ENST00000432645 CHMP4AQ9BY43 222 aa10.67□□□□□ -0.7
HDAC9-212ENST00000432645 TOPAZ1Q8N9V7 1692 aa10.67□□□□□ -0.7
HDAC9-212ENST00000432645 MAP3K19Q56UN5 1328 aa10.67□□□□□ -0.7
HDAC9-212ENST00000432645 RGPD8O14715 1765 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-212ENST00000432645 IL16Q14005 1332 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 RGS3P49796 1198 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 FTSJ3Q8IY81 847 aaKnown RBP10.66□□□□□ -0.7
HDAC9-212ENST00000432645 SSH2Q76I76 1423 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 TTC21AQ8NDW8 1320 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 PDE4AP27815 886 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 AMPHP49418 695 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 ZKSCAN2Q63HK3 967 aa10.66□□□□□ -0.7
HDAC9-212ENST00000432645 NPM2Q86SE8 214 aaKnown RBP10.66□□□□□ -0.7
HDAC9-212ENST00000432645 XRN1Q8IZH2 1706 aaKnown RBP10.66□□□□□ -0.7
HDAC9-212ENST00000432645 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
HDAC9-212ENST00000432645 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.7
HDAC9-212ENST00000432645 NOB1Q9ULX3 412 aaKnown RBP10.65□□□□□ -0.7
HDAC9-212ENST00000432645 ESCO1Q5FWF5 840 aa10.65□□□□□ -0.7
HDAC9-212ENST00000432645 TRIM27P14373 513 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 CT47B1P0C2W7 299 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-212ENST00000432645 DZIP1LQ8IYY4 767 aaKnown RBP10.64□□□□□ -0.71
HDAC9-212ENST00000432645 MBIPQ9NS73 344 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 NOP58Q9Y2X3 529 aaKnown RBP10.64□□□□□ -0.71
HDAC9-212ENST00000432645 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 ADAMTSL3P82987 1691 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
HDAC9-212ENST00000432645 MCM10Q7L590 875 aa10.63□□□□□ -0.71
HDAC9-212ENST00000432645 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
HDAC9-212ENST00000432645 LTV1Q96GA3 475 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-212ENST00000432645 XPCQ01831 940 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-212ENST00000432645 MS4A1P11836 297 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 GNAI1P63096 354 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
HDAC9-212ENST00000432645 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 ZBTB7CA1YPR0 619 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
HDAC9-212ENST00000432645 PSME1Q06323 249 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 NPHP4O75161 1426 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-212ENST00000432645 PEAK1Q9H792 1746 aa10.62□□□□□ -0.71
HDAC9-212ENST00000432645 FOXO3O43524 673 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 IFT57Q9NWB7 429 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 ANKARQ7Z5J8 1434 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 VAMP4O75379 141 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 C8orf58Q8NAV2 365 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 ORAI2Q96SN7 254 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 EYA1Q99502 592 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 FLT4P35916 1363 aa10.61□□□□□ -0.71
HDAC9-212ENST00000432645 ZNF853P0CG23 659 aa10.6□□□□□ -0.71
HDAC9-212ENST00000432645 ANP32AP39687 249 aaKnown RBP10.6□□□□□ -0.71
HDAC9-212ENST00000432645 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
HDAC9-212ENST00000432645 SBNO1A3KN83 1393 aa10.6□□□□□ -0.71
HDAC9-212ENST00000432645 KRT24Q2M2I5 525 aa10.6□□□□□ -0.71
HDAC9-212ENST00000432645 TWISTNBQ3B726 338 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-212ENST00000432645 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-212ENST00000432645 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
HDAC9-212ENST00000432645 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
HDAC9-212ENST00000432645 PROSER2Q86WR7 435 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-212ENST00000432645 MIS18AQ9NYP9 233 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms