RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 MBIPQ9NS73 344 aa21.1■□□□□ 0.97
CHFR-203ENST00000432561 CDK12Q9NYV4 1490 aaPredicted RBP21.1■□□□□ 0.97
CHFR-203ENST00000432561 AEBP1Q8IUX7 1158 aa21.09■□□□□ 0.97
CHFR-203ENST00000432561 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
CHFR-203ENST00000432561 VAMP4O75379 141 aa21.09■□□□□ 0.97
CHFR-203ENST00000432561 C1orf115Q9H7X2 142 aa21.09■□□□□ 0.97
CHFR-203ENST00000432561 IPO8O15397 1037 aaKnown RBP21.08■□□□□ 0.97
CHFR-203ENST00000432561 ITSN1Q15811 1721 aa21.08■□□□□ 0.97
CHFR-203ENST00000432561 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
CHFR-203ENST00000432561 KNDC1Q76NI1 1749 aa21.08■□□□□ 0.96
CHFR-203ENST00000432561 ALDH1L2Q3SY69 923 aa21.08■□□□□ 0.96
CHFR-203ENST00000432561 AKAP12Q02952 1782 aa21.07■□□□□ 0.96
CHFR-203ENST00000432561 C3P01024 1663 aa21.07■□□□□ 0.96
CHFR-203ENST00000432561 FRAT2O75474 233 aaPredicted RBP21.07■□□□□ 0.96
CHFR-203ENST00000432561 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
CHFR-203ENST00000432561 TECPR2O15040 1411 aa21.06■□□□□ 0.96
CHFR-203ENST00000432561 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
CHFR-203ENST00000432561 C8orf58Q8NAV2 365 aa21.06■□□□□ 0.96
CHFR-203ENST00000432561 SLKQ9H2G2 1235 aaPredicted RBP21.06■□□□□ 0.96
CHFR-203ENST00000432561 AATKQ6ZMQ8 1374 aa21.06■□□□□ 0.96
CHFR-203ENST00000432561 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.06■□□□□ 0.96
CHFR-203ENST00000432561 ACEP12821 1306 aa21.05■□□□□ 0.96
CHFR-203ENST00000432561 MRPL50Q8N5N7 158 aaKnown RBP21.05■□□□□ 0.96
CHFR-203ENST00000432561 GNAI1P63096 354 aa21.04■□□□□ 0.96
CHFR-203ENST00000432561 TBC1D32Q96NH3 1257 aa21.04■□□□□ 0.96
CHFR-203ENST00000432561 LNPKQ9C0E8 428 aa21.04■□□□□ 0.96
CHFR-203ENST00000432561 SMC5Q8IY18 1101 aa21.04■□□□□ 0.96
CHFR-203ENST00000432561 UPF2Q9HAU5 1272 aaKnown RBP21.04■□□□□ 0.96
CHFR-203ENST00000432561 IFT57Q9NWB7 429 aa21.04■□□□□ 0.96
CHFR-203ENST00000432561 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
CHFR-203ENST00000432561 TWISTNBQ3B726 338 aaPredicted RBP21.03■□□□□ 0.96
CHFR-203ENST00000432561 SULT6B1Q6IMI4 303 aa21.03■□□□□ 0.96
CHFR-203ENST00000432561 ZNF853P0CG23 659 aa21.03■□□□□ 0.96
CHFR-203ENST00000432561 EIF4A2Q14240 407 aaKnown RBP21.03■□□□□ 0.96
CHFR-203ENST00000432561 TTC21BQ7Z4L5 1316 aa21.02■□□□□ 0.96
CHFR-203ENST00000432561 KRT24Q2M2I5 525 aa21.02■□□□□ 0.96
CHFR-203ENST00000432561 ZNF692Q9BU19 519 aaPredicted RBP21.02■□□□□ 0.96
CHFR-203ENST00000432561 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
CHFR-203ENST00000432561 SIRT1Q96EB6 747 aa21.01■□□□□ 0.95
CHFR-203ENST00000432561 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
CHFR-203ENST00000432561 CALD1Q05682 793 aaKnown RBP21■□□□□ 0.95
CHFR-203ENST00000432561 SPRYD3Q8NCJ5 442 aa21■□□□□ 0.95
CHFR-203ENST00000432561 CFAP44Q96MT7 982 aa21■□□□□ 0.95
CHFR-203ENST00000432561 PTPRUQ92729 1446 aa20.99■□□□□ 0.95
CHFR-203ENST00000432561 MCM10Q7L590 875 aa20.98■□□□□ 0.95
CHFR-203ENST00000432561 BECN1Q14457 450 aa20.98■□□□□ 0.95
CHFR-203ENST00000432561 TBC1D2Q9BYX2 928 aa20.98■□□□□ 0.95
CHFR-203ENST00000432561 NUCB1Q02818 461 aa20.97■□□□□ 0.95
CHFR-203ENST00000432561 BRPF1P55201 1214 aaPredicted RBP20.96■□□□□ 0.95
CHFR-203ENST00000432561 ZNF428Q96B54 188 aa20.96■□□□□ 0.95
CHFR-203ENST00000432561 LMOD3Q0VAK6 560 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 ANKRD45Q5TZF3 282 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 CHD1LQ86WJ1 897 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 SIRT2Q8IXJ6 389 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 AMOTL2Q9Y2J4 779 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 PLEKHG1Q9ULL1 1385 aa20.95■□□□□ 0.94
CHFR-203ENST00000432561 C22orf23Q9BZE7 217 aa20.94■□□□□ 0.94
CHFR-203ENST00000432561 USP6P35125 1406 aa20.94■□□□□ 0.94
CHFR-203ENST00000432561 GSE1Q14687 1217 aa20.94■□□□□ 0.94
CHFR-203ENST00000432561 OVOS2A0A0J9YW53 1432 aa20.94■□□□□ 0.94
CHFR-203ENST00000432561 OVOS2Q6IE36 1432 aa20.94■□□□□ 0.94
CHFR-203ENST00000432561 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
CHFR-203ENST00000432561 TOPAZ1Q8N9V7 1692 aa20.93■□□□□ 0.94
CHFR-203ENST00000432561 ABCC4O15439 1325 aa20.93■□□□□ 0.94
CHFR-203ENST00000432561 MIS18AQ9NYP9 233 aa20.92■□□□□ 0.94
CHFR-203ENST00000432561 PLEKHG3A1L390 1219 aa20.92■□□□□ 0.94
CHFR-203ENST00000432561 FOXO3O43524 673 aa20.92■□□□□ 0.94
CHFR-203ENST00000432561 ARHGAP45Q92619 1136 aa20.92■□□□□ 0.94
CHFR-203ENST00000432561 EID1Q9Y6B2 187 aa20.91■□□□□ 0.94
CHFR-203ENST00000432561 RIMS1Q86UR5 1692 aaKnown RBP20.9■□□□□ 0.94
CHFR-203ENST00000432561 PIK3R4Q99570 1358 aa20.9■□□□□ 0.94
CHFR-203ENST00000432561 ANTXR1Q9H6X2 564 aa20.9■□□□□ 0.94
CHFR-203ENST00000432561 MAP3K19Q56UN5 1328 aa20.89■□□□□ 0.94
CHFR-203ENST00000432561 NUTM2GQ5VZR2 741 aa20.89■□□□□ 0.93
CHFR-203ENST00000432561 IL27Q8NEV9 243 aa20.88■□□□□ 0.93
CHFR-203ENST00000432561 NGDNQ8NEJ9 315 aaKnown RBP20.88■□□□□ 0.93
CHFR-203ENST00000432561 API5Q9BZZ5 524 aaKnown RBP20.86■□□□□ 0.93
CHFR-203ENST00000432561 NALCNQ8IZF0 1738 aa20.86■□□□□ 0.93
CHFR-203ENST00000432561 CHL1O00533 1208 aa20.85■□□□□ 0.93
CHFR-203ENST00000432561 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
CHFR-203ENST00000432561 SSH2Q76I76 1423 aa20.84■□□□□ 0.93
CHFR-203ENST00000432561 MTHFSDQ2M296 383 aaKnown RBP20.84■□□□□ 0.93
CHFR-203ENST00000432561 USP31Q70CQ4 1352 aa20.83■□□□□ 0.93
CHFR-203ENST00000432561 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.93
CHFR-203ENST00000432561 AMPHP49418 695 aa20.81■□□□□ 0.92
CHFR-203ENST00000432561 APBB1O00213 710 aa20.81■□□□□ 0.92
CHFR-203ENST00000432561 RGS12O14924 1447 aa20.81■□□□□ 0.92
CHFR-203ENST00000432561 DIP2AQ14689 1571 aa20.81■□□□□ 0.92
CHFR-203ENST00000432561 BMP2KLQ5H9B9 411 aa20.81■□□□□ 0.92
CHFR-203ENST00000432561 RBM33Q96EV2 1170 aaKnown RBP20.81■□□□□ 0.92
CHFR-203ENST00000432561 CHMP4BQ9H444 224 aaKnown RBP20.81■□□□□ 0.92
CHFR-203ENST00000432561 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
CHFR-203ENST00000432561 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
CHFR-203ENST00000432561 EYA1Q99502 592 aa20.8■□□□□ 0.92
CHFR-203ENST00000432561 BRPF3Q9ULD4 1205 aa20.8■□□□□ 0.92
CHFR-203ENST00000432561 TBX22Q9Y458 520 aa20.8■□□□□ 0.92
CHFR-203ENST00000432561 MSH6P52701 1360 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms