RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 KIAA1210Q9ULL0 1709 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 EVA1CP58658 441 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 ITPRIPQ8IWB1 547 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 NGEFQ8N5V2 710 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 TSPYL6Q8N831 410 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 SIRT1Q96EB6 747 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 SLAIN2Q9P270 581 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 USP6P35125 1406 aa14.52□□□□□ -0.08
SMPD4-205ENST00000431183 SMG6Q86US8 1419 aaKnown RBP14.52□□□□□ -0.08
SMPD4-205ENST00000431183 MSH6P52701 1360 aa14.52□□□□□ -0.09
SMPD4-205ENST00000431183 ZNF330Q9Y3S2 320 aaPredicted RBP14.52□□□□□ -0.09
SMPD4-205ENST00000431183 DEKP35659 375 aaKnown RBP14.52□□□□□ -0.09
SMPD4-205ENST00000431183 SLC4A10Q6U841 1118 aa14.52□□□□□ -0.09
SMPD4-205ENST00000431183 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.09
SMPD4-205ENST00000431183 TRIM35Q9UPQ4 493 aa14.52□□□□□ -0.09
SMPD4-205ENST00000431183 POLR1AO95602 1720 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-205ENST00000431183 HOXC9P31274 260 aa14.51□□□□□ -0.09
SMPD4-205ENST00000431183 MTHFSDQ2M296 383 aaKnown RBP14.51□□□□□ -0.09
SMPD4-205ENST00000431183 NPC1L1Q9UHC9 1359 aa14.51□□□□□ -0.09
SMPD4-205ENST00000431183 MYOM1P52179 1685 aa14.51□□□□□ -0.09
SMPD4-205ENST00000431183 NKTRP30414 1462 aaKnown RBP14.51□□□□□ -0.09
SMPD4-205ENST00000431183 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
SMPD4-205ENST00000431183 NBPF6Q5VWK0 638 aa14.51□□□□□ -0.09
SMPD4-205ENST00000431183 NBPF4Q96M43 638 aa14.51□□□□□ -0.09
SMPD4-205ENST00000431183 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
SMPD4-205ENST00000431183 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
SMPD4-205ENST00000431183 DDX54Q8TDD1 881 aaKnown RBP14.5□□□□□ -0.09
SMPD4-205ENST00000431183 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
SMPD4-205ENST00000431183 NSD2O96028 1365 aa14.5□□□□□ -0.09
SMPD4-205ENST00000431183 NRXN3Q9Y4C0 1643 aa14.5□□□□□ -0.09
SMPD4-205ENST00000431183 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
SMPD4-205ENST00000431183 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
SMPD4-205ENST00000431183 C1orf115Q9H7X2 142 aa14.48□□□□□ -0.09
SMPD4-205ENST00000431183 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
SMPD4-205ENST00000431183 ZNF530Q6P9A1 599 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-205ENST00000431183 SSH1Q8WYL5 1049 aa14.48□□□□□ -0.09
SMPD4-205ENST00000431183 ANXA1P04083 346 aa14.47□□□□□ -0.09
SMPD4-205ENST00000431183 SYTL4Q96C24 671 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-205ENST00000431183 NBR1Q14596 966 aa14.47□□□□□ -0.09
SMPD4-205ENST00000431183 PLEKHF1Q96S99 279 aa14.47□□□□□ -0.09
SMPD4-205ENST00000431183 ARHGAP23Q9P227 1491 aa14.47□□□□□ -0.09
SMPD4-205ENST00000431183 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
SMPD4-205ENST00000431183 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
SMPD4-205ENST00000431183 NOB1Q9ULX3 412 aaKnown RBP14.46□□□□□ -0.09
SMPD4-205ENST00000431183 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-205ENST00000431183 C8orf58Q8NAV2 365 aa14.46□□□□□ -0.09
SMPD4-205ENST00000431183 MBIPQ9NS73 344 aa14.46□□□□□ -0.09
SMPD4-205ENST00000431183 PIP4K2AP48426 406 aaPredicted RBP14.46□□□□□ -0.1
SMPD4-205ENST00000431183 BRINP3Q76B58 766 aa14.46□□□□□ -0.1
SMPD4-205ENST00000431183 TTC21AQ8NDW8 1320 aa14.46□□□□□ -0.1
SMPD4-205ENST00000431183 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
SMPD4-205ENST00000431183 TEFQ10587 303 aa14.45□□□□□ -0.1
SMPD4-205ENST00000431183 RLBP1P12271 317 aa14.45□□□□□ -0.1
SMPD4-205ENST00000431183 SLIT1O75093 1534 aa14.44□□□□□ -0.1
SMPD4-205ENST00000431183 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
SMPD4-205ENST00000431183 TWISTNBQ3B726 338 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-205ENST00000431183 LGR6Q9HBX8 967 aa14.44□□□□□ -0.1
SMPD4-205ENST00000431183 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-205ENST00000431183 UBAP1LF5GYI3 381 aa14.43□□□□□ -0.1
SMPD4-205ENST00000431183 C1orf141Q5JVX7 400 aa14.43□□□□□ -0.1
SMPD4-205ENST00000431183 TECPR2O15040 1411 aa14.43□□□□□ -0.1
SMPD4-205ENST00000431183 NPHP3Q7Z494 1330 aa14.43□□□□□ -0.1
SMPD4-205ENST00000431183 DIP2AQ14689 1571 aa14.43□□□□□ -0.1
SMPD4-205ENST00000431183 SLC39A6Q13433 755 aa14.42□□□□□ -0.1
SMPD4-205ENST00000431183 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
SMPD4-205ENST00000431183 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
SMPD4-205ENST00000431183 FLT4P35916 1363 aa14.42□□□□□ -0.1
SMPD4-205ENST00000431183 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
SMPD4-205ENST00000431183 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
SMPD4-205ENST00000431183 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
SMPD4-205ENST00000431183 F6X3S4 739 aa14.41□□□□□ -0.1
SMPD4-205ENST00000431183 GNAI1P63096 354 aa14.41□□□□□ -0.1
SMPD4-205ENST00000431183 MED14O60244 1454 aa14.4□□□□□ -0.1
SMPD4-205ENST00000431183 DLC1Q96QB1 1528 aa14.4□□□□□ -0.1
SMPD4-205ENST00000431183 KCNQ3O43525 872 aa14.4□□□□□ -0.1
SMPD4-205ENST00000431183 ZNF521Q96K83 1311 aa14.39□□□□□ -0.11
SMPD4-205ENST00000431183 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
SMPD4-205ENST00000431183 IP6K1Q92551 441 aa14.39□□□□□ -0.11
SMPD4-205ENST00000431183 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
SMPD4-205ENST00000431183 PTCH1Q13635 1447 aa14.39□□□□□ -0.11
SMPD4-205ENST00000431183 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
SMPD4-205ENST00000431183 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-205ENST00000431183 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
SMPD4-205ENST00000431183 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
SMPD4-205ENST00000431183 PIK3R4Q99570 1358 aa14.38□□□□□ -0.11
SMPD4-205ENST00000431183 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
SMPD4-205ENST00000431183 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
SMPD4-205ENST00000431183 KIAA0232Q92628 1395 aa14.38□□□□□ -0.11
SMPD4-205ENST00000431183 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
SMPD4-205ENST00000431183 RTL5Q5HYW3 569 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-205ENST00000431183 C1orf167Q5SNV9 1468 aa14.37□□□□□ -0.11
SMPD4-205ENST00000431183 TMEM57Q8N5G2 664 aa14.36□□□□□ -0.11
SMPD4-205ENST00000431183 GAS2L2Q8NHY3 880 aa14.36□□□□□ -0.11
SMPD4-205ENST00000431183 TRIM27P14373 513 aa14.36□□□□□ -0.11
SMPD4-205ENST00000431183 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
SMPD4-205ENST00000431183 BTG4Q9NY30 223 aa14.36□□□□□ -0.11
SMPD4-205ENST00000431183 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
SMPD4-205ENST00000431183 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-205ENST00000431183 CALD1Q05682 793 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms