RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
HOXC4-202ENST00000430889 ADAMTSL3P82987 1691 aa17.97■□□□□ 0.47
HOXC4-202ENST00000430889 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
HOXC4-202ENST00000430889 CHD2O14647 1828 aaKnown RBP17.96■□□□□ 0.47
HOXC4-202ENST00000430889 PIK3C2AO00443 1686 aa17.96■□□□□ 0.47
HOXC4-202ENST00000430889 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
HOXC4-202ENST00000430889 ANKARQ7Z5J8 1434 aa17.95■□□□□ 0.46
HOXC4-202ENST00000430889 HMOX1P09601 288 aa17.95■□□□□ 0.46
HOXC4-202ENST00000430889 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
HOXC4-202ENST00000430889 ZNF853P0CG23 659 aa17.94■□□□□ 0.46
HOXC4-202ENST00000430889 MVPQ14764 893 aaKnown RBP17.94■□□□□ 0.46
HOXC4-202ENST00000430889 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
HOXC4-202ENST00000430889 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
HOXC4-202ENST00000430889 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-202ENST00000430889 C8orf34Q49A92 452 aa17.93■□□□□ 0.46
HOXC4-202ENST00000430889 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
HOXC4-202ENST00000430889 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
HOXC4-202ENST00000430889 PAK3O75914 559 aaPredicted RBP17.92■□□□□ 0.46
HOXC4-202ENST00000430889 TRIM27P14373 513 aa17.92■□□□□ 0.46
HOXC4-202ENST00000430889 DZIP1LQ8IYY4 767 aaKnown RBP17.92■□□□□ 0.46
HOXC4-202ENST00000430889 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
HOXC4-202ENST00000430889 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
HOXC4-202ENST00000430889 ZNF428Q96B54 188 aa17.91■□□□□ 0.46
HOXC4-202ENST00000430889 NEFMP07197 916 aa17.9■□□□□ 0.46
HOXC4-202ENST00000430889 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
HOXC4-202ENST00000430889 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
HOXC4-202ENST00000430889 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
HOXC4-202ENST00000430889 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
HOXC4-202ENST00000430889 ATF7IPQ6VMQ6 1270 aa17.9■□□□□ 0.46
HOXC4-202ENST00000430889 NUTM2FA1L443 756 aa17.88■□□□□ 0.45
HOXC4-202ENST00000430889 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
HOXC4-202ENST00000430889 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
HOXC4-202ENST00000430889 KCNA6P17658 529 aa17.87■□□□□ 0.45
HOXC4-202ENST00000430889 LMOD3Q0VAK6 560 aa17.87■□□□□ 0.45
HOXC4-202ENST00000430889 THUMPD2Q9BTF0 503 aaKnown RBP17.87■□□□□ 0.45
HOXC4-202ENST00000430889 GNAI1P63096 354 aa17.87■□□□□ 0.45
HOXC4-202ENST00000430889 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
HOXC4-202ENST00000430889 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
HOXC4-202ENST00000430889 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
HOXC4-202ENST00000430889 VAMP4O75379 141 aa17.86■□□□□ 0.45
HOXC4-202ENST00000430889 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
HOXC4-202ENST00000430889 RGS3P49796 1198 aa17.85■□□□□ 0.45
HOXC4-202ENST00000430889 AEBP1Q8IUX7 1158 aa17.85■□□□□ 0.45
HOXC4-202ENST00000430889 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
HOXC4-202ENST00000430889 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
HOXC4-202ENST00000430889 SBNO1A3KN83 1393 aa17.84■□□□□ 0.45
HOXC4-202ENST00000430889 CFAP44Q96MT7 982 aa17.84■□□□□ 0.45
HOXC4-202ENST00000430889 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
HOXC4-202ENST00000430889 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.45
HOXC4-202ENST00000430889 FLT4P35916 1363 aa17.83■□□□□ 0.44
HOXC4-202ENST00000430889 KDRP35968 1356 aa17.83■□□□□ 0.44
HOXC4-202ENST00000430889 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
HOXC4-202ENST00000430889 MRPL50Q8N5N7 158 aaKnown RBP17.83■□□□□ 0.44
HOXC4-202ENST00000430889 RWDD1Q9H446 243 aaPredicted RBP17.83■□□□□ 0.44
HOXC4-202ENST00000430889 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
HOXC4-202ENST00000430889 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
HOXC4-202ENST00000430889 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
HOXC4-202ENST00000430889 NPM2Q86SE8 214 aaKnown RBP17.82■□□□□ 0.44
HOXC4-202ENST00000430889 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
HOXC4-202ENST00000430889 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
HOXC4-202ENST00000430889 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
HOXC4-202ENST00000430889 NWD1Q149M9 1564 aa17.81■□□□□ 0.44
HOXC4-202ENST00000430889 ARHGAP45Q92619 1136 aa17.81■□□□□ 0.44
HOXC4-202ENST00000430889 ZBTB40Q9NUA8 1239 aa17.81■□□□□ 0.44
HOXC4-202ENST00000430889 KIF24Q5T7B8 1368 aa17.81■□□□□ 0.44
HOXC4-202ENST00000430889 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
HOXC4-202ENST00000430889 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
HOXC4-202ENST00000430889 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
HOXC4-202ENST00000430889 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
HOXC4-202ENST00000430889 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
HOXC4-202ENST00000430889 IGSF1Q8N6C5 1336 aa17.78■□□□□ 0.44
HOXC4-202ENST00000430889 CRB1P82279 1406 aa17.78■□□□□ 0.44
HOXC4-202ENST00000430889 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
HOXC4-202ENST00000430889 ITPRIPQ8IWB1 547 aa17.78■□□□□ 0.44
HOXC4-202ENST00000430889 ABCC4O15439 1325 aa17.78■□□□□ 0.44
HOXC4-202ENST00000430889 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
HOXC4-202ENST00000430889 ADGRL3Q9HAR2 1447 aa17.77■□□□□ 0.44
HOXC4-202ENST00000430889 CHL1O00533 1208 aa17.77■□□□□ 0.43
HOXC4-202ENST00000430889 DCTN1Q14203 1278 aa17.77■□□□□ 0.43
HOXC4-202ENST00000430889 LTN1O94822 1766 aa17.76■□□□□ 0.43
HOXC4-202ENST00000430889 USP19O94966 1318 aa17.76■□□□□ 0.43
HOXC4-202ENST00000430889 PHRF1Q9P1Y6 1649 aaKnown RBP17.76■□□□□ 0.43
HOXC4-202ENST00000430889 KIAA0232Q92628 1395 aa17.76■□□□□ 0.43
HOXC4-202ENST00000430889 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
HOXC4-202ENST00000430889 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
HOXC4-202ENST00000430889 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
HOXC4-202ENST00000430889 NFAT5O94916 1531 aa17.75■□□□□ 0.43
HOXC4-202ENST00000430889 NPHP4O75161 1426 aaPredicted RBP17.73■□□□□ 0.43
HOXC4-202ENST00000430889 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
HOXC4-202ENST00000430889 RGS12O14924 1447 aa17.72■□□□□ 0.43
HOXC4-202ENST00000430889 ZBTB7BO15156 539 aaPredicted RBP17.72■□□□□ 0.43
HOXC4-202ENST00000430889 EYA1Q99502 592 aa17.72■□□□□ 0.43
HOXC4-202ENST00000430889 NLRP6P59044 892 aa17.71■□□□□ 0.43
HOXC4-202ENST00000430889 SOX12O15370 315 aa17.71■□□□□ 0.42
HOXC4-202ENST00000430889 HOXC9P31274 260 aa17.71■□□□□ 0.42
HOXC4-202ENST00000430889 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.42
HOXC4-202ENST00000430889 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
HOXC4-202ENST00000430889 MCM10Q7L590 875 aa17.7■□□□□ 0.42
HOXC4-202ENST00000430889 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
HOXC4-202ENST00000430889 AMPHP49418 695 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms