RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 NOS1P29475 1434 aa17.04■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 MED14O60244 1454 aa17.04■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 SPDYE4A6NLX3 237 aa17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 TRIM27P14373 513 aa17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 SYAP1Q96A49 352 aaPredicted RBP17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 PHF14O94880 888 aa17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 ANKRD36BQ8N2N9 1353 aa17.02■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 USP32Q8NFA0 1604 aa17.02■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 CREBRFQ8IUR6 639 aa17.02■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 VGLL3A8MV65 326 aa17.02■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 TSPY4P0CV99 314 aa17.02■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 TSPY10P0CW01 314 aa17.02■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 SLFN14P0C7P3 912 aa17.01■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ZDHHC9Q9Y397 364 aa17.01■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ABCC11Q96J66 1382 aa17.01■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 CDC45O75419 566 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 TULP2O00295 520 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 PKP1Q13835 747 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 GCC1Q96CN9 775 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 LNPKQ9C0E8 428 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 TSPYL1Q9H0U9 437 aa17■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 TPM3P06753 285 aa16.99■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 TIGD1Q96MW7 591 aa16.99■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 RIOK3O14730 519 aaKnown RBP16.99■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 RNF214Q8ND24 703 aa16.99■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 DDX41Q9UJV9 622 aaKnown RBP16.99■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ZNF518AQ6AHZ1 1483 aa16.98■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 MORC2Q9Y6X9 1032 aaPredicted RBP16.98■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 KIAA1524Q8TCG1 905 aa16.97■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 SMC4Q9NTJ3 1288 aa16.97■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 NSFL1CQ9UNZ2 370 aaKnown RBP16.97■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.97■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 MYOM2P54296 1465 aa16.96■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 ZBTB22O15209 634 aa16.96■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 KCNJ4P48050 445 aa16.96■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 MYO3AQ8NEV4 1616 aa16.96■□□□□ 0.31
CSNK1A1P1-201ENST00000430593 NCBP1Q09161 790 aaKnown RBP16.96■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 TERF2Q15554 542 aa16.96■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 CALCOCO1Q9P1Z2 691 aa16.95■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 ST18O60284 1047 aa16.94■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 FAM177BA6PVY3 158 aa16.94■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 TTC12Q9H892 705 aaPredicted RBP16.94■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 KCNA4P22459 653 aa16.93■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 NEURL4Q96JN8 1562 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 IPO8O15397 1037 aaKnown RBP16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 IGSF3O75054 1194 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 ADCY5O95622 1261 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 CHRM1P11229 460 aaPredicted RBP16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 CARD14Q9BXL6 1004 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 INO80Q9ULG1 1556 aaPredicted RBP16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 IL16Q14005 1332 aa16.92■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 ABCA6Q8N139 1617 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 BRD1O95696 1058 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 USP26Q9BXU7 913 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 PIK3R4Q99570 1358 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 PLCD3Q8N3E9 789 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 FAM53CQ9NYF3 392 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 PREX2Q70Z35 1606 aa16.9■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 ATAD2Q6PL18 1390 aa16.9■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 KRT222Q8N1A0 295 aa16.9■□□□□ 0.3
CSNK1A1P1-201ENST00000430593 TRPM2O94759 1503 aa16.89■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 SMTNL1A8MU46 457 aa16.89■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 IRX3P78415 501 aaPredicted RBP16.89■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 KIF18AQ8NI77 898 aa16.89■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 NOB1Q9ULX3 412 aaKnown RBP16.88■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 KDM4AO75164 1064 aa16.88■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 ALDH1L2Q3SY69 923 aa16.87■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 PAXIP1Q6ZW49 1069 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 CAPN2P17655 700 aa16.87■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 KCNF1Q9H3M0 494 aa16.87■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 CCDC183Q5T5S1 534 aa16.86■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms