RNA–Protein interactions for RNA: ENST00000430533.1

PREB-204, Transcript of prolactin regulatory element binding, human

TSL 2

Gene PREB, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PREB-204	ENST00000430533	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.46	□□□□□ -0.41
PREB-204	ENST00000430533	DCAF8L1	A6NGE4	600 aa		12.45	□□□□□ -0.42
PREB-204	ENST00000430533	PAK3	O75914	559 aa	Predicted RBP	12.45	□□□□□ -0.42
PREB-204	ENST00000430533	DDX10	Q13206	875 aa	Known RBP	12.45	□□□□□ -0.42
PREB-204	ENST00000430533	SSH2	Q76I76	1423 aa		12.45	□□□□□ -0.42
PREB-204	ENST00000430533	TTC21B	Q7Z4L5	1316 aa		12.44	□□□□□ -0.42
PREB-204	ENST00000430533	C1QTNF8	P60827	252 aa		12.44	□□□□□ -0.42
PREB-204	ENST00000430533	FAM196A	Q6ZSG2	479 aa		12.44	□□□□□ -0.42
PREB-204	ENST00000430533	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.44	□□□□□ -0.42
PREB-204	ENST00000430533	NPC1L1	Q9UHC9	1359 aa		12.43	□□□□□ -0.42
PREB-204	ENST00000430533	NBPF14	Q5TI25	921 aa		12.43	□□□□□ -0.42
PREB-204	ENST00000430533	NLRP13	Q86W25	1043 aa		12.42	□□□□□ -0.42
PREB-204	ENST00000430533	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
PREB-204	ENST00000430533	ABTB2	Q8N961	1025 aa		12.42	□□□□□ -0.42
PREB-204	ENST00000430533	CARD14	Q9BXL6	1004 aa		12.42	□□□□□ -0.42
PREB-204	ENST00000430533	COL14A1	Q05707	1796 aa	Known RBP	12.42	□□□□□ -0.42
PREB-204	ENST00000430533	UTRN	P46939	3433 aa		12.42	□□□□□ -0.42
PREB-204	ENST00000430533	PARD3	Q8TEW0	1356 aa		12.42	□□□□□ -0.42
PREB-204	ENST00000430533	COG3	Q96JB2	828 aa		12.41	□□□□□ -0.42
PREB-204	ENST00000430533	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.41	□□□□□ -0.42
PREB-204	ENST00000430533	ALS2	Q96Q42	1657 aa		12.41	□□□□□ -0.42
PREB-204	ENST00000430533	USP31	Q70CQ4	1352 aa		12.41	□□□□□ -0.42
PREB-204	ENST00000430533	SPATA31A1	Q5TZJ5	1347 aa		12.4	□□□□□ -0.42
PREB-204	ENST00000430533	KIF20B	Q96Q89	1820 aa		12.4	□□□□□ -0.42
PREB-204	ENST00000430533	PER1	O15534	1290 aa	Predicted RBP	12.4	□□□□□ -0.42
PREB-204	ENST00000430533	CHD4	Q14839	1912 aa		12.4	□□□□□ -0.42
PREB-204	ENST00000430533	PIK3C2A	O00443	1686 aa		12.39	□□□□□ -0.43
PREB-204	ENST00000430533	USP54	Q70EL1	1684 aa		12.39	□□□□□ -0.43
PREB-204	ENST00000430533	NLRP6	P59044	892 aa		12.39	□□□□□ -0.43
PREB-204	ENST00000430533	OVOS2	A0A0J9YW53	1432 aa		12.38	□□□□□ -0.43
PREB-204	ENST00000430533	OVOS2	Q6IE36	1432 aa		12.38	□□□□□ -0.43
PREB-204	ENST00000430533	FYB1	O15117	783 aa		12.38	□□□□□ -0.43
PREB-204	ENST00000430533	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.38	□□□□□ -0.43
PREB-204	ENST00000430533	KCNH5	Q8NCM2	988 aa		12.38	□□□□□ -0.43
PREB-204	ENST00000430533	USP19	O94966	1318 aa		12.37	□□□□□ -0.43
PREB-204	ENST00000430533	ANKRD26	Q9UPS8	1709 aa		12.37	□□□□□ -0.43
PREB-204	ENST00000430533	NME9	Q86XW9	330 aa		12.37	□□□□□ -0.43
PREB-204	ENST00000430533	CHRNA2	Q15822	529 aa		12.36	□□□□□ -0.43
PREB-204	ENST00000430533	MORC1	Q86VD1	984 aa		12.36	□□□□□ -0.43
PREB-204	ENST00000430533	GGNBP2	Q9H3C7	697 aa		12.36	□□□□□ -0.43
PREB-204	ENST00000430533	CRYBG1	Q9Y4K1	1723 aa		12.36	□□□□□ -0.43
PREB-204	ENST00000430533	ANP32C	O43423	234 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	PTGER2	P43116	358 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	RALBP1	Q15311	655 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.35	□□□□□ -0.43
PREB-204	ENST00000430533	STRN4	Q9NRL3	753 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	USP35	Q9P2H5	1018 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	SLIT3	O75094	1523 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	CASZ1	Q86V15	1759 aa		12.35	□□□□□ -0.43
PREB-204	ENST00000430533	CEP350	Q5VT06	3117 aa		12.34	□□□□□ -0.43
PREB-204	ENST00000430533	ZBTB7A	O95365	584 aa		12.34	□□□□□ -0.43
PREB-204	ENST00000430533	PDE3B	Q13370	1112 aa		12.34	□□□□□ -0.43
PREB-204	ENST00000430533	CC2D1B	Q5T0F9	858 aa	Known RBP	12.34	□□□□□ -0.43
PREB-204	ENST00000430533	SYT17	Q9BSW7	474 aa		12.34	□□□□□ -0.43
PREB-204	ENST00000430533	PRDM11	Q9NQV5	511 aa		12.34	□□□□□ -0.43
PREB-204	ENST00000430533	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.34	□□□□□ -0.43
PREB-204	ENST00000430533	AATK	Q6ZMQ8	1374 aa		12.33	□□□□□ -0.44
PREB-204	ENST00000430533	NUTM2G	Q5VZR2	741 aa		12.33	□□□□□ -0.44
PREB-204	ENST00000430533	PTF1A	Q7RTS3	328 aa		12.33	□□□□□ -0.44
PREB-204	ENST00000430533	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.33	□□□□□ -0.44
PREB-204	ENST00000430533	KIF24	Q5T7B8	1368 aa		12.32	□□□□□ -0.44
PREB-204	ENST00000430533	GC	P02774	474 aa		12.32	□□□□□ -0.44
PREB-204	ENST00000430533	DIEXF	Q68CQ4	756 aa	Known RBP	12.32	□□□□□ -0.44
PREB-204	ENST00000430533	BARGIN	Q6ZT62	677 aa		12.32	□□□□□ -0.44
PREB-204	ENST00000430533	PROM2	Q8N271	834 aa		12.32	□□□□□ -0.44
PREB-204	ENST00000430533	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.32	□□□□□ -0.44
PREB-204	ENST00000430533	ABCC6	O95255	1503 aa		12.32	□□□□□ -0.44
PREB-204	ENST00000430533	CPD	O75976	1380 aa		12.31	□□□□□ -0.44
PREB-204	ENST00000430533	KIAA0232	Q92628	1395 aa		12.31	□□□□□ -0.44
PREB-204	ENST00000430533	RTL1	A6NKG5	1358 aa		12.3	□□□□□ -0.44
PREB-204	ENST00000430533	ZC3H6	P61129	1189 aa	Known RBP	12.3	□□□□□ -0.44
PREB-204	ENST00000430533	LARP1	Q6PKG0	1096 aa	Known RBP	12.3	□□□□□ -0.44
PREB-204	ENST00000430533	NFAT5	O94916	1531 aa		12.3	□□□□□ -0.44
PREB-204	ENST00000430533	SBF2	Q86WG5	1849 aa		12.3	□□□□□ -0.44
PREB-204	ENST00000430533	PLSCR1	O15162	318 aa		12.29	□□□□□ -0.44
PREB-204	ENST00000430533	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.29	□□□□□ -0.44
PREB-204	ENST00000430533	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.29	□□□□□ -0.44
PREB-204	ENST00000430533	SMG6	Q86US8	1419 aa	Known RBP	12.28	□□□□□ -0.44
PREB-204	ENST00000430533	SOX12	O15370	315 aa		12.28	□□□□□ -0.44
PREB-204	ENST00000430533	EVA1C	P58658	441 aa		12.28	□□□□□ -0.44
PREB-204	ENST00000430533	CNGB1	Q14028	1251 aa	Predicted RBP	12.28	□□□□□ -0.44
PREB-204	ENST00000430533	SGIP1	Q9BQI5	828 aa		12.28	□□□□□ -0.44
PREB-204	ENST00000430533	FLT4	P35916	1363 aa		12.28	□□□□□ -0.44
PREB-204	ENST00000430533	TNNT2	P45379	298 aa	Predicted RBP	12.27	□□□□□ -0.45
PREB-204	ENST00000430533	AMPH	P49418	695 aa		12.27	□□□□□ -0.45
PREB-204	ENST00000430533	ARHGEF25	Q86VW2	580 aa		12.27	□□□□□ -0.45
PREB-204	ENST00000430533	TCP11L2	Q8N4U5	519 aa		12.27	□□□□□ -0.45
PREB-204	ENST00000430533	CFAP53	Q96M91	514 aa		12.27	□□□□□ -0.45
PREB-204	ENST00000430533	MAP3K19	Q56UN5	1328 aa		12.26	□□□□□ -0.45
PREB-204	ENST00000430533	PEAK1	Q9H792	1746 aa		12.25	□□□□□ -0.45
PREB-204	ENST00000430533	GIGYF1	O75420	1035 aa	Predicted RBP	12.25	□□□□□ -0.45
PREB-204	ENST00000430533	PPP2R1A	P30153	589 aa		12.25	□□□□□ -0.45
PREB-204	ENST00000430533	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.25	□□□□□ -0.45
PREB-204	ENST00000430533	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.24	□□□□□ -0.45
PREB-204	ENST00000430533	PPM1G	O15355	546 aa	Predicted RBP	12.24	□□□□□ -0.45
PREB-204	ENST00000430533	LTN1	O94822	1766 aa		12.24	□□□□□ -0.45
PREB-204	ENST00000430533	RRS1	Q15050	365 aa	Known RBP	12.24	□□□□□ -0.45
PREB-204	ENST00000430533	RGPD4	Q7Z3J3	1758 aa		12.24	□□□□□ -0.45
PREB-204	ENST00000430533	IP6K1	Q92551	441 aa		12.24	□□□□□ -0.45
PREB-204	ENST00000430533	POLK	Q9UBT6	870 aa		12.24	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms