RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 CWC15Q9P013 229 aaKnown RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 SURF6O75683 361 aaKnown RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 STIM1Q13586 685 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 WWC2Q6AWC2 1192 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 EXOSC9Q06265 439 aaKnown RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 CCDC57Q2TAC2 916 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 ATF7IPQ6VMQ6 1270 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 PRM3Q9NNZ6 103 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 EIF2AK4Q9P2K8 1649 aaKnown RBP8.37□□□□□ -1.07
CPS1-203ENST00000430249 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
CPS1-203ENST00000430249 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
CPS1-203ENST00000430249 CABP4P57796 275 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 PANK1Q8TE04 598 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 SCAF11Q99590 1463 aaKnown RBP8.36□□□□□ -1.07
CPS1-203ENST00000430249 NFE2L2Q16236 605 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 ESCO1Q5FWF5 840 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 AMOTQ4VCS5 1084 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 CCAR2Q8N163 923 aaKnown RBP8.36□□□□□ -1.07
CPS1-203ENST00000430249 ODF2Q5BJF6 829 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 AFAP1Q8N556 730 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 ADGRL1O94910 1474 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 CT47A1Q5JQC4 288 aaPredicted RBP8.36□□□□□ -1.07
CPS1-203ENST00000430249 HDGFL1Q5TGJ6 251 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 IQCEQ6IPM2 695 aa8.36□□□□□ -1.07
CPS1-203ENST00000430249 SYTL4Q96C24 671 aaPredicted RBP8.36□□□□□ -1.07
CPS1-203ENST00000430249 NOB1Q9ULX3 412 aaKnown RBP8.36□□□□□ -1.07
CPS1-203ENST00000430249 CCDC27Q2M243 656 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 ZNF287Q9HBT7 754 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 CEP131Q9UPN4 1083 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
CPS1-203ENST00000430249 CCDC192P0DO97 292 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 SDF4Q9BRK5 362 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 ZNHIT6Q9NWK9 470 aaKnown RBP8.35□□□□□ -1.07
CPS1-203ENST00000430249 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 CCAR1Q8IX12 1150 aaKnown RBP8.35□□□□□ -1.07
CPS1-203ENST00000430249 DNAI2Q9GZS0 605 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 CFAP45Q9UL16 551 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
CPS1-203ENST00000430249 ABCC5O15440 1437 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 ERLIN2O94905 339 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 CNNM1Q9NRU3 951 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 CDK13Q14004 1512 aaKnown RBP8.34□□□□□ -1.07
CPS1-203ENST00000430249 PLB1Q6P1J6 1458 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 RALGAPBQ86X10 1494 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 CD109Q6YHK3 1445 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 NKTRP30414 1462 aaKnown RBP8.34□□□□□ -1.07
CPS1-203ENST00000430249 IL16Q14005 1332 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 CCDC69A6NI79 296 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 OFD1O75665 1012 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 STK38Q15208 465 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 TMEM132EQ6IEE7 984 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 CHD1LQ86WJ1 897 aa8.34□□□□□ -1.07
CPS1-203ENST00000430249 NFKBIBQ15653 356 aa8.34□□□□□ -1.08
CPS1-203ENST00000430249 ZNF592Q92610 1267 aa8.34□□□□□ -1.08
CPS1-203ENST00000430249 PHAXQ9H814 394 aaKnown RBP8.34□□□□□ -1.08
CPS1-203ENST00000430249 DUOX2Q9NRD8 1548 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 DCAF8L1A6NGE4 600 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 TRAK2O60296 914 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 KRT85P78386 507 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 AIMP1Q12904 312 aaKnown RBP8.33□□□□□ -1.08
CPS1-203ENST00000430249 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 ZNF530Q6P9A1 599 aaPredicted RBP8.33□□□□□ -1.08
CPS1-203ENST00000430249 ZNF771Q7L3S4 317 aaPredicted RBP8.33□□□□□ -1.08
CPS1-203ENST00000430249 NECTIN2Q92692 538 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 SLC4A2P04920 1241 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 HMGB1P09429 215 aaKnown RBP8.33□□□□□ -1.08
CPS1-203ENST00000430249 TEX14Q8IWB6 1497 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 SYCP1Q15431 976 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 ZNF652Q9Y2D9 606 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 PTPRCP08575 1304 aa8.33□□□□□ -1.08
CPS1-203ENST00000430249 ANKRD18AQ8IVF6 992 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 CAGE1Q8TC20 777 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
CPS1-203ENST00000430249 DENND4BO75064 1496 aaPredicted RBP8.32□□□□□ -1.08
CPS1-203ENST00000430249 KIF2AO00139 706 aaPredicted RBP8.32□□□□□ -1.08
CPS1-203ENST00000430249 RAD21O60216 631 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 SLFN5Q08AF3 891 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 SOGA3Q5TF21 947 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 NEK4P51957 841 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 NAP1L1P55209 391 aaKnown RBP8.32□□□□□ -1.08
CPS1-203ENST00000430249 CABP1Q9NZU7 370 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 ARHGEF11O15085 1522 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 RPRD2Q5VT52 1461 aaKnown RBP8.32□□□□□ -1.08
CPS1-203ENST00000430249 SULT6B1Q6IMI4 303 aa8.32□□□□□ -1.08
CPS1-203ENST00000430249 STARD3NLO95772 234 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 DESP17661 470 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 SMC2O95347 1197 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
CPS1-203ENST00000430249 SH2B1Q9NRF2 756 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms