RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 OVOS2Q6IE36 1432 aa17.95■□□□□ 0.46
RBM39-212ENST00000429968 USP6P35125 1406 aa17.94■□□□□ 0.46
RBM39-212ENST00000429968 TRIM27P14373 513 aa17.94■□□□□ 0.46
RBM39-212ENST00000429968 XRN1Q8IZH2 1706 aaKnown RBP17.94■□□□□ 0.46
RBM39-212ENST00000429968 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
RBM39-212ENST00000429968 DIP2AQ14689 1571 aa17.93■□□□□ 0.46
RBM39-212ENST00000429968 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
RBM39-212ENST00000429968 MVPQ14764 893 aaKnown RBP17.92■□□□□ 0.46
RBM39-212ENST00000429968 AEBP1Q8IUX7 1158 aa17.92■□□□□ 0.46
RBM39-212ENST00000429968 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
RBM39-212ENST00000429968 LAS1LQ9Y4W2 734 aaKnown RBP17.92■□□□□ 0.46
RBM39-212ENST00000429968 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
RBM39-212ENST00000429968 PLEKHG3A1L390 1219 aa17.92■□□□□ 0.46
RBM39-212ENST00000429968 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
RBM39-212ENST00000429968 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
RBM39-212ENST00000429968 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
RBM39-212ENST00000429968 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
RBM39-212ENST00000429968 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
RBM39-212ENST00000429968 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
RBM39-212ENST00000429968 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
RBM39-212ENST00000429968 DZIP1LQ8IYY4 767 aaKnown RBP17.9■□□□□ 0.46
RBM39-212ENST00000429968 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
RBM39-212ENST00000429968 RIMS1Q86UR5 1692 aaKnown RBP17.9■□□□□ 0.46
RBM39-212ENST00000429968 FMN2Q9NZ56 1722 aa17.9■□□□□ 0.46
RBM39-212ENST00000429968 PTCH1Q13635 1447 aa17.9■□□□□ 0.46
RBM39-212ENST00000429968 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
RBM39-212ENST00000429968 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
RBM39-212ENST00000429968 TSPYL6Q8N831 410 aa17.89■□□□□ 0.45
RBM39-212ENST00000429968 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
RBM39-212ENST00000429968 SOX12O15370 315 aa17.89■□□□□ 0.45
RBM39-212ENST00000429968 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
RBM39-212ENST00000429968 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
RBM39-212ENST00000429968 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
RBM39-212ENST00000429968 MARF1Q9Y4F3 1742 aaKnown RBP17.88■□□□□ 0.45
RBM39-212ENST00000429968 CEP170BQ9Y4F5 1589 aaPredicted RBP17.88■□□□□ 0.45
RBM39-212ENST00000429968 ATF7IPQ6VMQ6 1270 aa17.87■□□□□ 0.45
RBM39-212ENST00000429968 FTSJ3Q8IY81 847 aaKnown RBP17.87■□□□□ 0.45
RBM39-212ENST00000429968 TMEM57Q8N5G2 664 aa17.87■□□□□ 0.45
RBM39-212ENST00000429968 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
RBM39-212ENST00000429968 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
RBM39-212ENST00000429968 ZNF853P0CG23 659 aa17.85■□□□□ 0.45
RBM39-212ENST00000429968 KCNA6P17658 529 aa17.85■□□□□ 0.45
RBM39-212ENST00000429968 THEMISQ8N1K5 641 aaPredicted RBP17.85■□□□□ 0.45
RBM39-212ENST00000429968 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
RBM39-212ENST00000429968 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
RBM39-212ENST00000429968 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
RBM39-212ENST00000429968 TPRNQ4KMQ1 711 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 VAMP4O75379 141 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 NEFMP07197 916 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 NBR1Q14596 966 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
RBM39-212ENST00000429968 SEC24BO95487 1268 aa17.83■□□□□ 0.45
RBM39-212ENST00000429968 C8orf58Q8NAV2 365 aa17.82■□□□□ 0.44
RBM39-212ENST00000429968 SLC4A3P48751 1232 aa17.81■□□□□ 0.44
RBM39-212ENST00000429968 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
RBM39-212ENST00000429968 USP19O94966 1318 aa17.81■□□□□ 0.44
RBM39-212ENST00000429968 MAP3K19Q56UN5 1328 aa17.81■□□□□ 0.44
RBM39-212ENST00000429968 CHD2O14647 1828 aaKnown RBP17.81■□□□□ 0.44
RBM39-212ENST00000429968 AAMPQ13685 434 aa17.81■□□□□ 0.44
RBM39-212ENST00000429968 ALDH1L2Q3SY69 923 aa17.81■□□□□ 0.44
RBM39-212ENST00000429968 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
RBM39-212ENST00000429968 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
RBM39-212ENST00000429968 KIF16BQ96L93 1317 aa17.79■□□□□ 0.44
RBM39-212ENST00000429968 GNAI1P63096 354 aa17.79■□□□□ 0.44
RBM39-212ENST00000429968 KRT24Q2M2I5 525 aa17.79■□□□□ 0.44
RBM39-212ENST00000429968 ZBTB40Q9NUA8 1239 aa17.79■□□□□ 0.44
RBM39-212ENST00000429968 NGDNQ8NEJ9 315 aaKnown RBP17.78■□□□□ 0.44
RBM39-212ENST00000429968 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
RBM39-212ENST00000429968 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
RBM39-212ENST00000429968 DDX19BQ9UMR2 479 aa17.78■□□□□ 0.44
RBM39-212ENST00000429968 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.44
RBM39-212ENST00000429968 MCM10Q7L590 875 aa17.77■□□□□ 0.44
RBM39-212ENST00000429968 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.43
RBM39-212ENST00000429968 FOXO3O43524 673 aa17.76■□□□□ 0.43
RBM39-212ENST00000429968 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
RBM39-212ENST00000429968 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
RBM39-212ENST00000429968 TTC21AQ8NDW8 1320 aa17.76■□□□□ 0.43
RBM39-212ENST00000429968 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
RBM39-212ENST00000429968 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
RBM39-212ENST00000429968 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
RBM39-212ENST00000429968 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
RBM39-212ENST00000429968 IPO8O15397 1037 aaKnown RBP17.74■□□□□ 0.43
RBM39-212ENST00000429968 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
RBM39-212ENST00000429968 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
RBM39-212ENST00000429968 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
RBM39-212ENST00000429968 LMOD3Q0VAK6 560 aa17.73■□□□□ 0.43
RBM39-212ENST00000429968 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
RBM39-212ENST00000429968 FLT4P35916 1363 aa17.73■□□□□ 0.43
RBM39-212ENST00000429968 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
RBM39-212ENST00000429968 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
RBM39-212ENST00000429968 LTN1O94822 1766 aa17.72■□□□□ 0.43
RBM39-212ENST00000429968 ARHGEF10O15013 1369 aa17.71■□□□□ 0.43
RBM39-212ENST00000429968 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
RBM39-212ENST00000429968 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
RBM39-212ENST00000429968 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
RBM39-212ENST00000429968 CRB1P82279 1406 aa17.71■□□□□ 0.43
RBM39-212ENST00000429968 ABCC4O15439 1325 aa17.71■□□□□ 0.43
RBM39-212ENST00000429968 NLRP6P59044 892 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms