RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 TBC1D32Q96NH3 1257 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 PCDHB8Q9UN66 801 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 PCDHB13Q9Y5F0 798 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 ARHGEF40Q8TER5 1519 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 MAFGO15525 162 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 HSPA5P11021 654 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 PTPRGP23470 1445 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 CYP2C19P33261 490 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 MAP9Q49MG5 647 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 CENPQQ7L2Z9 268 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 RBSNQ9H1K0 784 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 BRMS1Q9HCU9 246 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 MED4Q9NPJ6 270 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 SUFUQ9UMX1 484 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 SPATA31E1Q6ZUB1 1445 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 DDX11L8A8MPP1 907 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 FAM163BP0C2L3 166 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 ANAPC15P60006 121 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 SETQ01105 290 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 NCBP1Q09161 790 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 C1QTNF12Q5T7M4 302 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 ST7Q9NRC1 585 aa5.38□□□□□ -1.55
R3HDM1-206ENST00000429703 DENND4BO75064 1496 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 KLHL33A6NCF5 533 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 TRIM66O15016 1216 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 ERICH4A6NGS2 130 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 ZKSCAN8Q15776 578 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 CCDC96Q2M329 555 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 AKT1S1Q96B36 256 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 CXorf56Q9H5V9 222 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 SPTLC3Q9NUV7 552 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 BSDC1Q9NW68 430 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 CCDC144AA2RUR9 1427 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 LRRIQ1Q96JM4 1722 aa5.37□□□□□ -1.55
R3HDM1-206ENST00000429703 CT47B1P0C2W7 299 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 ZNF445P59923 1031 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 FKBP5Q13451 457 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 CC2D2BQ6DHV5 1058 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 GPATCH11Q8N954 259 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 PSMD1Q99460 953 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 GPBP1L1Q9HC44 474 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 CHMP5Q9NZZ3 219 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 SWT1Q5T5J6 900 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 KIF18AQ8NI77 898 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 ITFG2Q969R8 447 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 TSPYL2Q9H2G4 693 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.36□□□□□ -1.551e-6■■■□□ 16.9
R3HDM1-206ENST00000429703 ANKRD33BA6NCL7 494 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 SART3Q15020 963 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 BARGINQ6ZT62 677 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 SLC26A8Q96RN1 970 aa5.36□□□□□ -1.55
R3HDM1-206ENST00000429703 TSPOAP1O95153 1857 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 KIF1CO43896 1103 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 NBPF6Q5VWK0 638 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 NBPF5PQ86XG9 351 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 ZNF513Q8N8E2 541 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 NBPF4Q96M43 638 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 TOMM22Q9NS69 142 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 HECW1Q76N89 1606 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 ANKRD23Q86SG2 305 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 PACS2Q86VP3 889 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 C17orf53Q8N3J3 647 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 PIBF1Q8WXW3 757 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 NOL10Q9BSC4 688 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 RASSF4Q9H2L5 321 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 KDM5CP41229 1560 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 FAM135AQ9P2D6 1515 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 ZNF853P0CG23 659 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 RBM5P52756 815 aaKnown RBP eCLIP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 MUM1L1Q5H9M0 696 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 REM2Q8IYK8 340 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 JMYQ8N9B5 988 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 GPT2Q8TD30 523 aa5.35□□□□□ -1.55
R3HDM1-206ENST00000429703 MROH2AA6NES4 1674 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 MYO5CQ9NQX4 1742 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 CASQ1P31415 396 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 MTA1Q13330 715 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 RAB3GAP1Q15042 981 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 SMYD5Q6GMV2 418 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 FBXO22Q8NEZ5 403 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 FAM163AQ96GL9 167 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 MAGI2Q86UL8 1455 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 NCKAP5LQ9HCH0 1330 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 ATP2B1P20020 1258 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 SYT10Q6XYQ8 523 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 CLEC17AQ6ZS10 378 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 TERF2IPQ9NYB0 399 aa5.34□□□□□ -1.55
R3HDM1-206ENST00000429703 TTC37Q6PGP7 1564 aa5.34□□□□□ -1.56
R3HDM1-206ENST00000429703 MYO1CO00159 1063 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 COQ9O75208 318 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 TNNT1P13805 278 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 RBM6P78332 1123 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 SRPK2P78362 688 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 CTR9Q6PD62 1173 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 KIF1BPQ96EK5 621 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 CDCA7LQ96GN5 454 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 ERBB3P21860 1342 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 KANK1Q14678 1352 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms