RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 AAMPQ13685 434 aa25.49■■□□□ 1.67
CASC4-203ENST00000429162 PANK1Q8TE04 598 aa25.48■■□□□ 1.67
CASC4-203ENST00000429162 BCL2L13Q9BXK5 485 aa25.47■■□□□ 1.67
CASC4-203ENST00000429162 SBNO1A3KN83 1393 aa25.47■■□□□ 1.67
CASC4-203ENST00000429162 NWD1Q149M9 1564 aa25.47■■□□□ 1.67
CASC4-203ENST00000429162 DLG5Q8TDM6 1919 aa25.47■■□□□ 1.67
CASC4-203ENST00000429162 COG6Q9Y2V7 657 aa25.46■■□□□ 1.67
CASC4-203ENST00000429162 FLT4P35916 1363 aa25.46■■□□□ 1.67
CASC4-203ENST00000429162 CLUAP1Q96AJ1 413 aa25.45■■□□□ 1.67
CASC4-203ENST00000429162 SMC4Q9NTJ3 1288 aa25.45■■□□□ 1.66
CASC4-203ENST00000429162 MARF1Q9Y4F3 1742 aaKnown RBP25.45■■□□□ 1.66
CASC4-203ENST00000429162 ZKSCAN2Q63HK3 967 aa25.44■■□□□ 1.66
CASC4-203ENST00000429162 ARHGEF10O15013 1369 aa25.44■■□□□ 1.66
CASC4-203ENST00000429162 MAP3K19Q56UN5 1328 aa25.44■■□□□ 1.66
CASC4-203ENST00000429162 IFT57Q9NWB7 429 aa25.43■■□□□ 1.66
CASC4-203ENST00000429162 GNAI1P63096 354 aa25.42■■□□□ 1.66
CASC4-203ENST00000429162 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
CASC4-203ENST00000429162 HSP90AB2PQ58FF8 381 aa25.41■■□□□ 1.66
CASC4-203ENST00000429162 SULT6B1Q6IMI4 303 aa25.41■■□□□ 1.66
CASC4-203ENST00000429162 SOX12O15370 315 aa25.41■■□□□ 1.66
CASC4-203ENST00000429162 ZNF428Q96B54 188 aa25.41■■□□□ 1.66
CASC4-203ENST00000429162 PHF8Q9UPP1 1060 aa25.41■■□□□ 1.66
CASC4-203ENST00000429162 SSH1Q8WYL5 1049 aa25.4■■□□□ 1.66
CASC4-203ENST00000429162 ALDH1L2Q3SY69 923 aa25.39■■□□□ 1.66
CASC4-203ENST00000429162 KIF16BQ96L93 1317 aa25.39■■□□□ 1.66
CASC4-203ENST00000429162 RLBP1P12271 317 aa25.39■■□□□ 1.65
CASC4-203ENST00000429162 NLRP6P59044 892 aa25.39■■□□□ 1.65
CASC4-203ENST00000429162 AEBP1Q8IUX7 1158 aa25.39■■□□□ 1.65
CASC4-203ENST00000429162 FTSJ3Q8IY81 847 aaKnown RBP25.38■■□□□ 1.65
CASC4-203ENST00000429162 LAS1LQ9Y4W2 734 aaKnown RBP25.38■■□□□ 1.65
CASC4-203ENST00000429162 DZIP1LQ8IYY4 767 aaKnown RBP25.37■■□□□ 1.65
CASC4-203ENST00000429162 ZNF853P0CG23 659 aa25.37■■□□□ 1.65
CASC4-203ENST00000429162 AMPHP49418 695 aa25.37■■□□□ 1.65
CASC4-203ENST00000429162 THUMPD2Q9BTF0 503 aaKnown RBP25.37■■□□□ 1.65
CASC4-203ENST00000429162 TNNQ9UQP3 1299 aa25.37■■□□□ 1.65
CASC4-203ENST00000429162 MVPQ14764 893 aaKnown RBP25.35■■□□□ 1.65
CASC4-203ENST00000429162 CFAP44Q96MT7 982 aa25.34■■□□□ 1.65
CASC4-203ENST00000429162 PDE4AP27815 886 aa25.33■■□□□ 1.65
CASC4-203ENST00000429162 ATF7IPQ6VMQ6 1270 aa25.33■■□□□ 1.65
CASC4-203ENST00000429162 ABTB2Q8N961 1025 aa25.33■■□□□ 1.65
CASC4-203ENST00000429162 KDRP35968 1356 aa25.33■■□□□ 1.65
CASC4-203ENST00000429162 IPO8O15397 1037 aaKnown RBP25.33■■□□□ 1.65
CASC4-203ENST00000429162 PAK3O75914 559 aaPredicted RBP25.33■■□□□ 1.65
CASC4-203ENST00000429162 TRIM27P14373 513 aa25.32■■□□□ 1.64
CASC4-203ENST00000429162 MBIPQ9NS73 344 aa25.32■■□□□ 1.64
CASC4-203ENST00000429162 RTL1A6NKG5 1358 aa25.32■■□□□ 1.64
CASC4-203ENST00000429162 BRPF1P55201 1214 aaPredicted RBP25.31■■□□□ 1.64
CASC4-203ENST00000429162 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
CASC4-203ENST00000429162 RBM33Q96EV2 1170 aaKnown RBP25.31■■□□□ 1.64
CASC4-203ENST00000429162 IGSF1Q8N6C5 1336 aa25.31■■□□□ 1.64
CASC4-203ENST00000429162 BACH2Q9BYV9 841 aa25.31■■□□□ 1.64
CASC4-203ENST00000429162 NOB1Q9ULX3 412 aaKnown RBP25.3■■□□□ 1.64
CASC4-203ENST00000429162 IGHDP01880 384 aa25.29■■□□□ 1.64
CASC4-203ENST00000429162 SKAP1Q86WV1 359 aa25.29■■□□□ 1.64
CASC4-203ENST00000429162 FAM83GA6ND36 823 aa25.28■■□□□ 1.64
CASC4-203ENST00000429162 ESCO1Q5FWF5 840 aa25.28■■□□□ 1.64
CASC4-203ENST00000429162 NUTM2GQ5VZR2 741 aa25.28■■□□□ 1.64
CASC4-203ENST00000429162 HOXC9P31274 260 aa25.27■■□□□ 1.64
CASC4-203ENST00000429162 ANP32AP39687 249 aaKnown RBP25.27■■□□□ 1.64
CASC4-203ENST00000429162 DDX19BQ9UMR2 479 aa25.27■■□□□ 1.64
CASC4-203ENST00000429162 LTN1O94822 1766 aa25.27■■□□□ 1.64
CASC4-203ENST00000429162 VAMP4O75379 141 aa25.27■■□□□ 1.64
CASC4-203ENST00000429162 NFAT5O94916 1531 aa25.26■■□□□ 1.63
CASC4-203ENST00000429162 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
CASC4-203ENST00000429162 PSME1Q06323 249 aa25.25■■□□□ 1.63
CASC4-203ENST00000429162 DCTN1Q14203 1278 aa25.25■■□□□ 1.63
CASC4-203ENST00000429162 EYA1Q99502 592 aa25.25■■□□□ 1.63
CASC4-203ENST00000429162 TWISTNBQ3B726 338 aaPredicted RBP25.24■■□□□ 1.63
CASC4-203ENST00000429162 PCDHB15Q9Y5E8 787 aa25.24■■□□□ 1.63
CASC4-203ENST00000429162 ITPRIPQ8IWB1 547 aa25.24■■□□□ 1.63
CASC4-203ENST00000429162 MSH5O43196 834 aa25.23■■□□□ 1.63
CASC4-203ENST00000429162 PROSER2Q86WR7 435 aaPredicted RBP25.23■■□□□ 1.63
CASC4-203ENST00000429162 MRPL50Q8N5N7 158 aaKnown RBP25.23■■□□□ 1.63
CASC4-203ENST00000429162 RWDD1Q9H446 243 aaPredicted RBP25.23■■□□□ 1.63
CASC4-203ENST00000429162 PHRF1Q9P1Y6 1649 aaKnown RBP25.23■■□□□ 1.63
CASC4-203ENST00000429162 TSPYL6Q8N831 410 aa25.22■■□□□ 1.63
CASC4-203ENST00000429162 HAP1P54257 671 aaPredicted RBP25.22■■□□□ 1.63
CASC4-203ENST00000429162 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
CASC4-203ENST00000429162 ARHGAP45Q92619 1136 aa25.22■■□□□ 1.63
CASC4-203ENST00000429162 TMEM57Q8N5G2 664 aa25.21■■□□□ 1.63
CASC4-203ENST00000429162 RGS3P49796 1198 aa25.2■■□□□ 1.62
CASC4-203ENST00000429162 KCNH5Q8NCM2 988 aa25.2■■□□□ 1.62
CASC4-203ENST00000429162 CRB1P82279 1406 aa25.2■■□□□ 1.62
CASC4-203ENST00000429162 MCM10Q7L590 875 aa25.2■■□□□ 1.62
CASC4-203ENST00000429162 CHL1O00533 1208 aa25.19■■□□□ 1.62
CASC4-203ENST00000429162 MTHFSDQ2M296 383 aaKnown RBP25.19■■□□□ 1.62
CASC4-203ENST00000429162 C8orf58Q8NAV2 365 aa25.19■■□□□ 1.62
CASC4-203ENST00000429162 KIAA0232Q92628 1395 aa25.19■■□□□ 1.62
CASC4-203ENST00000429162 LRRC37A3O60309 1634 aa25.18■■□□□ 1.62
CASC4-203ENST00000429162 RTF1Q92541 710 aaKnown RBP25.18■■□□□ 1.62
CASC4-203ENST00000429162 SLIT3O75094 1523 aa25.18■■□□□ 1.62
CASC4-203ENST00000429162 TRPM3Q9HCF6 1732 aaPredicted RBP25.18■■□□□ 1.62
CASC4-203ENST00000429162 FAM161AQ3B820 660 aa25.18■■□□□ 1.62
CASC4-203ENST00000429162 C1orf167Q5SNV9 1468 aa25.17■■□□□ 1.62
CASC4-203ENST00000429162 ELL2O00472 640 aaPredicted RBP25.16■■□□□ 1.62
CASC4-203ENST00000429162 IP6K1Q92551 441 aa25.16■■□□□ 1.62
CASC4-203ENST00000429162 ORAI2Q96SN7 254 aa25.16■■□□□ 1.62
CASC4-203ENST00000429162 HTATSF1O43719 755 aaKnown RBP25.16■■□□□ 1.62
CASC4-203ENST00000429162 CHMP4BQ9H444 224 aaKnown RBP25.16■■□□□ 1.62
CASC4-203ENST00000429162 C19orf44Q9H6X5 657 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms