RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.736e-7■■■□□ 18.3
C9orf3-206ENST00000428313 NSFL1CQ9UNZ2 370 aaKnown RBP19.61■□□□□ 0.73
C9orf3-206ENST00000428313 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
C9orf3-206ENST00000428313 FAM177BA6PVY3 158 aa19.6■□□□□ 0.73
C9orf3-206ENST00000428313 RIOK3O14730 519 aaKnown RBP19.6■□□□□ 0.73
C9orf3-206ENST00000428313 NOS1P29475 1434 aa19.6■□□□□ 0.73
C9orf3-206ENST00000428313 SLFN14P0C7P3 912 aa19.59■□□□□ 0.73
C9orf3-206ENST00000428313 IGSF3O75054 1194 aa19.59■□□□□ 0.73
C9orf3-206ENST00000428313 ZBTB22O15209 634 aa19.58■□□□□ 0.73
C9orf3-206ENST00000428313 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.73
C9orf3-206ENST00000428313 ANKRD36BQ8N2N9 1353 aa19.58■□□□□ 0.73
C9orf3-206ENST00000428313 PPRC1Q5VV67 1664 aaKnown RBP19.58■□□□□ 0.73
C9orf3-206ENST00000428313 KIAA1210Q9ULL0 1709 aa19.58■□□□□ 0.72
C9orf3-206ENST00000428313 TPM3P06753 285 aa19.58■□□□□ 0.72
C9orf3-206ENST00000428313 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
C9orf3-206ENST00000428313 KCNJ4P48050 445 aa19.57■□□□□ 0.72
C9orf3-206ENST00000428313 TIGD1Q96MW7 591 aa19.57■□□□□ 0.72
C9orf3-206ENST00000428313 CTNNA3Q9UI47 895 aa19.57■□□□□ 0.72
C9orf3-206ENST00000428313 ST18O60284 1047 aa19.56■□□□□ 0.72
C9orf3-206ENST00000428313 FAM193AP78312 1265 aa19.56■□□□□ 0.72
C9orf3-206ENST00000428313 TTC12Q9H892 705 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-206ENST00000428313 MED14O60244 1454 aa19.56■□□□□ 0.72
C9orf3-206ENST00000428313 ZBTB7CA1YPR0 619 aa19.56■□□□□ 0.72
C9orf3-206ENST00000428313 SSH1Q8WYL5 1049 aa19.56■□□□□ 0.72
C9orf3-206ENST00000428313 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
C9orf3-206ENST00000428313 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
C9orf3-206ENST00000428313 KIAA1524Q8TCG1 905 aa19.55■□□□□ 0.72
C9orf3-206ENST00000428313 DDX41Q9UJV9 622 aaKnown RBP19.55■□□□□ 0.72
C9orf3-206ENST00000428313 MORC2Q9Y6X9 1032 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-206ENST00000428313 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
C9orf3-206ENST00000428313 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
C9orf3-206ENST00000428313 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
C9orf3-206ENST00000428313 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
C9orf3-206ENST00000428313 C17orf53Q8N3J3 647 aaPredicted RBP19.54■□□□□ 0.72
C9orf3-206ENST00000428313 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
C9orf3-206ENST00000428313 ADCY5O95622 1261 aa19.54■□□□□ 0.72
C9orf3-206ENST00000428313 PLCD3Q8N3E9 789 aa19.54■□□□□ 0.72
C9orf3-206ENST00000428313 ZGPATQ8N5A5 531 aaKnown RBP19.54■□□□□ 0.72
C9orf3-206ENST00000428313 SYCP2Q9BX26 1530 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 USP26Q9BXU7 913 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 TSPYL1Q9H0U9 437 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 TULP2O00295 520 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 NCBP1Q09161 790 aaKnown RBP19.53■□□□□ 0.72
C9orf3-206ENST00000428313 CREBRFQ8IUR6 639 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 USP25Q9UHP3 1055 aa19.53■□□□□ 0.72
C9orf3-206ENST00000428313 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
C9orf3-206ENST00000428313 TERF2Q15554 542 aa19.52■□□□□ 0.72
C9orf3-206ENST00000428313 CALCOCO1Q9P1Z2 691 aa19.52■□□□□ 0.72
C9orf3-206ENST00000428313 EXOSC9Q06265 439 aaKnown RBP19.51■□□□□ 0.71
C9orf3-206ENST00000428313 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
C9orf3-206ENST00000428313 BRD1O95696 1058 aa19.5■□□□□ 0.71
C9orf3-206ENST00000428313 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
C9orf3-206ENST00000428313 IL16Q14005 1332 aa19.48■□□□□ 0.71
C9orf3-206ENST00000428313 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
C9orf3-206ENST00000428313 NEURL4Q96JN8 1562 aa19.48■□□□□ 0.71
C9orf3-206ENST00000428313 MORC1Q86VD1 984 aa19.48■□□□□ 0.71
C9orf3-206ENST00000428313 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
C9orf3-206ENST00000428313 SMTNL1A8MU46 457 aa19.46■□□□□ 0.71
C9orf3-206ENST00000428313 KDM4AO75164 1064 aa19.46■□□□□ 0.71
C9orf3-206ENST00000428313 ALDH1L2Q3SY69 923 aa19.46■□□□□ 0.71
C9orf3-206ENST00000428313 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
C9orf3-206ENST00000428313 KRT222Q8N1A0 295 aa19.46■□□□□ 0.71
C9orf3-206ENST00000428313 MPNDQ8N594 471 aa19.46■□□□□ 0.71
C9orf3-206ENST00000428313 MYOM2P54296 1465 aa19.46■□□□□ 0.71
C9orf3-206ENST00000428313 GSPT1P15170 499 aaKnown RBP19.46■□□□□ 0.71
C9orf3-206ENST00000428313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.45■□□□□ 0.7
C9orf3-206ENST00000428313 PAXIP1Q6ZW49 1069 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-206ENST00000428313 KIF18AQ8NI77 898 aa19.45■□□□□ 0.7
C9orf3-206ENST00000428313 IRX3P78415 501 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-206ENST00000428313 CCDC183Q5T5S1 534 aa19.45■□□□□ 0.7
C9orf3-206ENST00000428313 CHAMP1Q96JM3 812 aa19.45■□□□□ 0.7
C9orf3-206ENST00000428313 KCNF1Q9H3M0 494 aa19.45■□□□□ 0.7
C9orf3-206ENST00000428313 PYCARDQ9ULZ3 195 aa19.45■□□□□ 0.7
C9orf3-206ENST00000428313 MYO3AQ8NEV4 1616 aa19.44■□□□□ 0.7
C9orf3-206ENST00000428313 GOLGA6L6A8MZA4 724 aa19.44■□□□□ 0.7
C9orf3-206ENST00000428313 TRPM2O94759 1503 aa19.44■□□□□ 0.7
C9orf3-206ENST00000428313 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-206ENST00000428313 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
C9orf3-206ENST00000428313 FAM53CQ9NYF3 392 aa19.43■□□□□ 0.7
C9orf3-206ENST00000428313 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
C9orf3-206ENST00000428313 MCM2P49736 904 aa19.42■□□□□ 0.7
C9orf3-206ENST00000428313 TTC22Q5TAA0 569 aa19.42■□□□□ 0.7
C9orf3-206ENST00000428313 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
C9orf3-206ENST00000428313 SBNO2Q9Y2G9 1366 aa19.42■□□□□ 0.7
C9orf3-206ENST00000428313 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-206ENST00000428313 CAPN2P17655 700 aa19.42■□□□□ 0.7
C9orf3-206ENST00000428313 TMEM87AQ8NBN3 555 aa19.42■□□□□ 0.7
C9orf3-206ENST00000428313 TEX2Q8IWB9 1127 aa19.41■□□□□ 0.7
C9orf3-206ENST00000428313 PLEKHM2Q8IWE5 1019 aa19.41■□□□□ 0.7
C9orf3-206ENST00000428313 FBLN2P98095 1184 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 CUL4AQ13619 759 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 INTS4Q96HW7 963 aaKnown RBP19.4■□□□□ 0.7
C9orf3-206ENST00000428313 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■■□□□ 11.7
C9orf3-206ENST00000428313 PTPRTO14522 1441 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 TRAPPC8Q9Y2L5 1435 aa19.4■□□□□ 0.7
C9orf3-206ENST00000428313 HCLS1P14317 486 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms