RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PHACTR3Q96KR7 559 aa9.92□□□□□ -0.82
LRCH3-204ENST00000428136 ABCC4O15439 1325 aa9.91□□□□□ -0.82
LRCH3-204ENST00000428136 CPS1P31327 1500 aa9.91□□□□□ -0.82
LRCH3-204ENST00000428136 GNAI1P63096 354 aa9.91□□□□□ -0.82
LRCH3-204ENST00000428136 BMP2KLQ5H9B9 411 aa9.91□□□□□ -0.82
LRCH3-204ENST00000428136 CHD1LQ86WJ1 897 aa9.91□□□□□ -0.82
LRCH3-204ENST00000428136 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-204ENST00000428136 DLG5Q8TDM6 1919 aa9.91□□□□□ -0.82
LRCH3-204ENST00000428136 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-204ENST00000428136 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
LRCH3-204ENST00000428136 WAPLQ7Z5K2 1190 aa9.9□□□□□ -0.82
LRCH3-204ENST00000428136 CHMP5Q9NZZ3 219 aa9.9□□□□□ -0.82
LRCH3-204ENST00000428136 MCM4P33991 863 aa9.89□□□□□ -0.83
LRCH3-204ENST00000428136 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
LRCH3-204ENST00000428136 MFAP1P55081 439 aaKnown RBP9.89□□□□□ -0.83
LRCH3-204ENST00000428136 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
LRCH3-204ENST00000428136 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.89□□□□□ -0.83
LRCH3-204ENST00000428136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
LRCH3-204ENST00000428136 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 FSD2A1L4K1 749 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 METP08581 1390 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 ITSN1Q15811 1721 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 L1TD1Q5T7N2 865 aaKnown RBP9.88□□□□□ -0.83
LRCH3-204ENST00000428136 SIRT2Q8IXJ6 389 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 TSPYL6Q8N831 410 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
LRCH3-204ENST00000428136 FBLN1P23142 703 aa9.87□□□□□ -0.83
LRCH3-204ENST00000428136 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
LRCH3-204ENST00000428136 KIF2CQ99661 725 aa9.87□□□□□ -0.83
LRCH3-204ENST00000428136 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
LRCH3-204ENST00000428136 NME9Q86XW9 330 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 CCDC61Q9Y6R9 512 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 RGPD1P0DJD0 1748 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 HMOX1P09601 288 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 NUDT16Q96DE0 195 aaKnown RBP9.86□□□□□ -0.83
LRCH3-204ENST00000428136 API5Q9BZZ5 524 aaKnown RBP9.86□□□□□ -0.83
LRCH3-204ENST00000428136 LNPKQ9C0E8 428 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
LRCH3-204ENST00000428136 NALCNQ8IZF0 1738 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 HSCBQ8IWL3 235 aa9.86□□□□□ -0.83
LRCH3-204ENST00000428136 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
LRCH3-204ENST00000428136 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
LRCH3-204ENST00000428136 COG3Q96JB2 828 aa9.85□□□□□ -0.83
LRCH3-204ENST00000428136 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
LRCH3-204ENST00000428136 FAM69CQ0P6D2 419 aa9.84□□□□□ -0.83
LRCH3-204ENST00000428136 INTS3Q68E01 1043 aaKnown RBP9.84□□□□□ -0.83
LRCH3-204ENST00000428136 SENP3Q9H4L4 574 aaPredicted RBP9.84□□□□□ -0.83
LRCH3-204ENST00000428136 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
LRCH3-204ENST00000428136 RGS12O14924 1447 aa9.84□□□□□ -0.83
LRCH3-204ENST00000428136 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
LRCH3-204ENST00000428136 KIAA0232Q92628 1395 aa9.84□□□□□ -0.83
LRCH3-204ENST00000428136 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
LRCH3-204ENST00000428136 ANKRD45Q5TZF3 282 aa9.84□□□□□ -0.83
LRCH3-204ENST00000428136 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
LRCH3-204ENST00000428136 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
LRCH3-204ENST00000428136 DCTPP1Q9H773 170 aa9.83□□□□□ -0.84
LRCH3-204ENST00000428136 UBR1Q8IWV7 1749 aa9.83□□□□□ -0.84
LRCH3-204ENST00000428136 HDGFP51858 240 aaKnown RBP9.83□□□□□ -0.84
LRCH3-204ENST00000428136 PRR36Q9H6K5 1346 aa9.83□□□□□ -0.84
LRCH3-204ENST00000428136 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 CHL1O00533 1208 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 ISY1Q9ULR0 285 aaKnown RBP9.82□□□□□ -0.84
LRCH3-204ENST00000428136 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.82□□□□□ -0.84
LRCH3-204ENST00000428136 TSPOAP1O95153 1857 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 TRAK2O60296 914 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 HAP1P54257 671 aaPredicted RBP9.82□□□□□ -0.84
LRCH3-204ENST00000428136 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 ATP10DQ9P241 1426 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 PEAK1Q9H792 1746 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 RAB3GAP1Q15042 981 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 CLEC17AQ6ZS10 378 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 TXNDC2Q86VQ3 553 aa9.82□□□□□ -0.84
LRCH3-204ENST00000428136 ADAMTS13Q76LX8 1427 aa9.81□□□□□ -0.84
LRCH3-204ENST00000428136 XRCC6P12956 609 aaKnown RBP eCLIP9.81□□□□□ -0.84
LRCH3-204ENST00000428136 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
LRCH3-204ENST00000428136 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
LRCH3-204ENST00000428136 CDC45O75419 566 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
LRCH3-204ENST00000428136 RRS1Q15050 365 aaKnown RBP9.8□□□□□ -0.84
LRCH3-204ENST00000428136 ANKRD44Q8N8A2 993 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 SPRYD3Q8NCJ5 442 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 ROBO2Q9HCK4 1378 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 TMEM2Q9UHN6 1383 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 CRB1P82279 1406 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 GOLGA6L3A6NEY3 463 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 CYB5RLQ6IPT4 315 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 PTPRCP08575 1304 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 FAM83GA6ND36 823 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 GSPT1P15170 499 aaKnown RBP9.8□□□□□ -0.84
LRCH3-204ENST00000428136 PTMSP20962 102 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 RPAP2Q8IXW5 612 aaPredicted RBP9.8□□□□□ -0.84
LRCH3-204ENST00000428136 NCKAP5LQ9HCH0 1330 aa9.8□□□□□ -0.84
LRCH3-204ENST00000428136 USP6P35125 1406 aa9.79□□□□□ -0.84
LRCH3-204ENST00000428136 K7ELQ4 463 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-204ENST00000428136 TNPO1Q92973 898 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms