RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 SGSM3Q96HU1 749 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 MYH16Q9H6N6 1097 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 GLI3P10071 1580 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 COL19A1Q14993 1142 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 FBXO33Q7Z6M2 555 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 ZNF662Q6ZS27 426 aa4.35□□□□□ -1.71
RGPD1-203ENST00000428128 NOL8Q76FK4 1167 aaKnown RBP4.35□□□□□ -1.71
RGPD1-203ENST00000428128 DENND4BO75064 1496 aaPredicted RBP4.35□□□□□ -1.71
RGPD1-203ENST00000428128 CASZ1Q86V15 1759 aa4.35□□□□□ -1.71
RGPD1-203ENST00000428128 TMEM259Q4ZIN3 620 aa4.35□□□□□ -1.71
RGPD1-203ENST00000428128 MICAL1Q8TDZ2 1067 aa4.35□□□□□ -1.71
RGPD1-203ENST00000428128 RECKO95980 971 aa4.34□□□□□ -1.71
RGPD1-203ENST00000428128 SPTY2D1Q68D10 685 aaPredicted RBP4.34□□□□□ -1.71
RGPD1-203ENST00000428128 GIGYF2Q6Y7W6 1299 aaKnown RBP4.34□□□□□ -1.71
RGPD1-203ENST00000428128 SPDYE1Q8NFV5 336 aaPredicted RBP4.34□□□□□ -1.71
RGPD1-203ENST00000428128 FAM212AQ96EL1 285 aa4.34□□□□□ -1.71
RGPD1-203ENST00000428128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.34□□□□□ -1.71
RGPD1-203ENST00000428128 TBX22Q9Y458 520 aa4.34□□□□□ -1.71
RGPD1-203ENST00000428128 SYCP2Q9BX26 1530 aa4.34□□□□□ -1.71
RGPD1-203ENST00000428128 MAMSTRQ6ZN01 415 aa4.34□□□□□ -1.71
RGPD1-203ENST00000428128 MAF1Q9H063 256 aa4.34□□□□□ -1.71
RGPD1-203ENST00000428128 QTRT2Q9H974 415 aaKnown RBP4.34□□□□□ -1.71
RGPD1-203ENST00000428128 ZNF831Q5JPB2 1677 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 RGS20O76081 388 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 NAALADL2Q58DX5 795 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 DCAF8Q5TAQ9 597 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 DPH6Q7L8W6 267 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 ADAMTS19Q8TE59 1207 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 GPATCH3Q96I76 525 aa4.34□□□□□ -1.72
RGPD1-203ENST00000428128 REPIN1Q9BWE0 567 aaKnown RBP4.34□□□□□ -1.72
RGPD1-203ENST00000428128 SBNO2Q9Y2G9 1366 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 SETBP1Q9Y6X0 1596 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 B4GALNT3Q6L9W6 998 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 PHLDB3Q6NSJ2 640 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 KCNB2Q92953 911 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 SNRKQ9NRH2 765 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 KIF1AQ12756 1690 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 PTPRKQ15262 1439 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 PKNOX2Q96KN3 472 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 PTPRGP23470 1445 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 DCCP43146 1447 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 RAB11FIP3O75154 756 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 FBXO31Q5XUX0 539 aaPredicted RBP4.33□□□□□ -1.72
RGPD1-203ENST00000428128 MTMR14Q8NCE2 650 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 GMLQ99445 158 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 ABCC6O95255 1503 aa4.33□□□□□ -1.72
RGPD1-203ENST00000428128 TRAPPC8Q9Y2L5 1435 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 SOX12O15370 315 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 NRXN3Q9Y4C0 1643 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 POM121CA8CG34 1229 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 GNPATO15228 680 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 PPFIA4O75335 1185 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 APLP1P51693 650 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 CLEC4GQ6UXB4 293 aa4.32□□□□□ -1.72
RGPD1-203ENST00000428128 ZNF579Q8NAF0 562 aaKnown RBP4.32□□□□□ -1.72
RGPD1-203ENST00000428128 DDX27Q96GQ7 796 aaKnown RBP4.32□□□□□ -1.72
RGPD1-203ENST00000428128 CALR3Q96L12 384 aaKnown RBP4.32□□□□□ -1.72
RGPD1-203ENST00000428128 ANAPC15P60006 121 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 RBL2Q08999 1139 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 LDLRAD1Q5T700 205 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 MORC4Q8TE76 937 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 DNAJC2Q99543 621 aaKnown RBP4.31□□□□□ -1.72
RGPD1-203ENST00000428128 THSD7AQ9UPZ6 1657 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 CCDC194A0A1B0GVG4 234 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 TDRD9Q8NDG6 1382 aaKnown RBP4.31□□□□□ -1.72
RGPD1-203ENST00000428128 ADGRB2O60241 1585 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 EXOC5O00471 708 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 RFC5P40937 340 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 RTL5Q5HYW3 569 aaPredicted RBP4.31□□□□□ -1.72
RGPD1-203ENST00000428128 CACTIN-AS1Q8N1I8 211 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 TMTC2Q8N394 836 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 TERF2IPQ9NYB0 399 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 RPS6KL1Q9Y6S9 549 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 FYCO1Q9BQS8 1478 aa4.31□□□□□ -1.72
RGPD1-203ENST00000428128 PTGER2P43116 358 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 PDAP1Q13442 181 aaKnown RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 PROCA1Q8NCQ7 364 aaPredicted RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 NLRP2Q9NX02 1062 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 ALS2Q96Q42 1657 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 RPRD2Q5VT52 1461 aaKnown RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 SOWAHDA6NJG2 315 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 VIL1P09327 827 aaKnown RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 FAM69CQ0P6D2 419 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 HIC1Q14526 733 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 SLC39A13Q96H72 371 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 SPACA7Q96KW9 195 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 PPP1R12CQ9BZL4 782 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 TRPM2O94759 1503 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 LRRC7Q96NW7 1537 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 MCCP23508 829 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 RAD51AP2Q09MP3 1159 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 PLCD4Q9BRC7 762 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 LARP6Q9BRS8 491 aaKnown RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 ALG2Q9H553 416 aa4.3□□□□□ -1.72
RGPD1-203ENST00000428128 RBM27Q9P2N5 1060 aaKnown RBP4.3□□□□□ -1.72
RGPD1-203ENST00000428128 PHLPP1O60346 1717 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 SLC34A2O95436 690 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 NLRP6P59044 892 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 MRPL58Q14197 206 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms