RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
TRPM4-202ENST00000427978 SSFA2P28290 1259 aa16.61■□□□□ 0.25
TRPM4-202ENST00000427978 SIRT2Q8IXJ6 389 aa16.6■□□□□ 0.25
TRPM4-202ENST00000427978 GCC1Q96CN9 775 aa16.6■□□□□ 0.25
TRPM4-202ENST00000427978 CHMP4BQ9H444 224 aaKnown RBP16.6■□□□□ 0.25
TRPM4-202ENST00000427978 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
TRPM4-202ENST00000427978 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
TRPM4-202ENST00000427978 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
TRPM4-202ENST00000427978 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
TRPM4-202ENST00000427978 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
TRPM4-202ENST00000427978 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
TRPM4-202ENST00000427978 F6X3S4 739 aa16.59■□□□□ 0.25
TRPM4-202ENST00000427978 DDX49Q9Y6V7 483 aaKnown RBP16.59■□□□□ 0.25
TRPM4-202ENST00000427978 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.25
TRPM4-202ENST00000427978 CDC45O75419 566 aa16.58■□□□□ 0.25
TRPM4-202ENST00000427978 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
TRPM4-202ENST00000427978 SETBP1Q9Y6X0 1596 aa16.58■□□□□ 0.24
TRPM4-202ENST00000427978 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
TRPM4-202ENST00000427978 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.24
TRPM4-202ENST00000427978 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
TRPM4-202ENST00000427978 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
TRPM4-202ENST00000427978 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
TRPM4-202ENST00000427978 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
TRPM4-202ENST00000427978 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
TRPM4-202ENST00000427978 IL13P35225 146 aa16.57■□□□□ 0.24
TRPM4-202ENST00000427978 MCTP1Q6DN14 999 aa16.57■□□□□ 0.24
TRPM4-202ENST00000427978 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
TRPM4-202ENST00000427978 CAMSAP1Q5T5Y3 1602 aa16.56■□□□□ 0.24
TRPM4-202ENST00000427978 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
TRPM4-202ENST00000427978 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
TRPM4-202ENST00000427978 RTF1Q92541 710 aaKnown RBP16.55■□□□□ 0.24
TRPM4-202ENST00000427978 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
TRPM4-202ENST00000427978 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
TRPM4-202ENST00000427978 FOXO3O43524 673 aa16.55■□□□□ 0.24
TRPM4-202ENST00000427978 MEIS3Q99687 375 aa16.55■□□□□ 0.24
TRPM4-202ENST00000427978 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
TRPM4-202ENST00000427978 PPLO60437 1756 aa16.54■□□□□ 0.24
TRPM4-202ENST00000427978 MRE11P49959 708 aa16.54■□□□□ 0.24
TRPM4-202ENST00000427978 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
TRPM4-202ENST00000427978 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
TRPM4-202ENST00000427978 GSPT1P15170 499 aaKnown RBP16.54■□□□□ 0.24
TRPM4-202ENST00000427978 CASC1Q6TDU7 716 aa16.54■□□□□ 0.24
TRPM4-202ENST00000427978 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
TRPM4-202ENST00000427978 CHAMP1Q96JM3 812 aa16.54■□□□□ 0.24
TRPM4-202ENST00000427978 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
TRPM4-202ENST00000427978 TRIM6-TRIM34B2RNG4 842 aa16.53■□□□□ 0.24
TRPM4-202ENST00000427978 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
TRPM4-202ENST00000427978 EXOC6BQ9Y2D4 811 aa16.53■□□□□ 0.24
TRPM4-202ENST00000427978 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
TRPM4-202ENST00000427978 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRPM4-202ENST00000427978 RILPL2Q969X0 211 aa16.52■□□□□ 0.24
TRPM4-202ENST00000427978 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
TRPM4-202ENST00000427978 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
TRPM4-202ENST00000427978 GAS2L3Q86XJ1 694 aa16.52■□□□□ 0.23
TRPM4-202ENST00000427978 ZNF428Q96B54 188 aa16.52■□□□□ 0.23
TRPM4-202ENST00000427978 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
TRPM4-202ENST00000427978 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
TRPM4-202ENST00000427978 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
TRPM4-202ENST00000427978 AMPHP49418 695 aa16.5■□□□□ 0.23
TRPM4-202ENST00000427978 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
TRPM4-202ENST00000427978 NGDNQ8NEJ9 315 aaKnown RBP16.5■□□□□ 0.23
TRPM4-202ENST00000427978 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
TRPM4-202ENST00000427978 KIF2CQ99661 725 aa16.5■□□□□ 0.23
TRPM4-202ENST00000427978 ZC3H13Q5T200 1668 aaKnown RBP16.49■□□□□ 0.23
TRPM4-202ENST00000427978 PTPRMP28827 1452 aa16.49■□□□□ 0.23
TRPM4-202ENST00000427978 SDSP20132 328 aa16.49■□□□□ 0.23
TRPM4-202ENST00000427978 PKP1Q13835 747 aa16.49■□□□□ 0.23
TRPM4-202ENST00000427978 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
TRPM4-202ENST00000427978 G2E3Q7L622 706 aa16.49■□□□□ 0.23
TRPM4-202ENST00000427978 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
TRPM4-202ENST00000427978 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
TRPM4-202ENST00000427978 ARHGAP45Q92619 1136 aa16.48■□□□□ 0.23
TRPM4-202ENST00000427978 SNX21Q969T3 373 aa16.48■□□□□ 0.23
TRPM4-202ENST00000427978 CD163L1Q9NR16 1453 aa16.48■□□□□ 0.23
TRPM4-202ENST00000427978 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
TRPM4-202ENST00000427978 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
TRPM4-202ENST00000427978 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
TRPM4-202ENST00000427978 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
TRPM4-202ENST00000427978 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
TRPM4-202ENST00000427978 SIGLEC1Q9BZZ2 1709 aa16.47■□□□□ 0.23
TRPM4-202ENST00000427978 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
TRPM4-202ENST00000427978 METP08581 1390 aa16.47■□□□□ 0.23
TRPM4-202ENST00000427978 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
TRPM4-202ENST00000427978 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
TRPM4-202ENST00000427978 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
TRPM4-202ENST00000427978 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
TRPM4-202ENST00000427978 STK31Q9BXU1 1019 aa16.47■□□□□ 0.23
TRPM4-202ENST00000427978 ABCC4O15439 1325 aa16.46■□□□□ 0.23
TRPM4-202ENST00000427978 MAP4K4O95819 1239 aaPredicted RBP16.46■□□□□ 0.23
TRPM4-202ENST00000427978 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
TRPM4-202ENST00000427978 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
TRPM4-202ENST00000427978 NEK4P51957 841 aa16.46■□□□□ 0.23
TRPM4-202ENST00000427978 DCTPP1Q9H773 170 aa16.46■□□□□ 0.23
TRPM4-202ENST00000427978 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
TRPM4-202ENST00000427978 ACEP12821 1306 aa16.46■□□□□ 0.22
TRPM4-202ENST00000427978 ST18O60284 1047 aa16.45■□□□□ 0.22
TRPM4-202ENST00000427978 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
TRPM4-202ENST00000427978 ANO2Q9NQ90 1003 aa16.45■□□□□ 0.22
TRPM4-202ENST00000427978 PIK3C2BO00750 1634 aa16.45■□□□□ 0.22
TRPM4-202ENST00000427978 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms