RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-206ENST00000426658 ZSCAN23Q3MJ62 389 aa12.53□□□□□ -0.4
CTCFL-206ENST00000426658 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.4
CTCFL-206ENST00000426658 GNAI1P63096 354 aa12.52□□□□□ -0.41
CTCFL-206ENST00000426658 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
CTCFL-206ENST00000426658 ZNF428Q96B54 188 aa12.52□□□□□ -0.41
CTCFL-206ENST00000426658 CCDC39Q9UFE4 941 aa12.52□□□□□ -0.41
CTCFL-206ENST00000426658 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
CTCFL-206ENST00000426658 REC8O95072 547 aa12.52□□□□□ -0.41
CTCFL-206ENST00000426658 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.41
CTCFL-206ENST00000426658 COG3Q96JB2 828 aa12.52□□□□□ -0.41
CTCFL-206ENST00000426658 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
CTCFL-206ENST00000426658 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
CTCFL-206ENST00000426658 KCNJ4P48050 445 aa12.51□□□□□ -0.41
CTCFL-206ENST00000426658 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
CTCFL-206ENST00000426658 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
CTCFL-206ENST00000426658 MCCP23508 829 aa12.5□□□□□ -0.41
CTCFL-206ENST00000426658 DDIT3P35638 169 aa12.5□□□□□ -0.41
CTCFL-206ENST00000426658 SLC26A8Q96RN1 970 aa12.5□□□□□ -0.41
CTCFL-206ENST00000426658 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
CTCFL-206ENST00000426658 RTEL1-TNFRSF6BF6WH68 1400 aa12.5□□□□□ -0.41
CTCFL-206ENST00000426658 SYCE3A1L190 88 aa12.49□□□□□ -0.41
CTCFL-206ENST00000426658 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
CTCFL-206ENST00000426658 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-206ENST00000426658 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-206ENST00000426658 FCHSD2O94868 740 aa12.49□□□□□ -0.41
CTCFL-206ENST00000426658 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
CTCFL-206ENST00000426658 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-206ENST00000426658 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
CTCFL-206ENST00000426658 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
CTCFL-206ENST00000426658 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
CTCFL-206ENST00000426658 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 MTERF4Q7Z6M4 381 aaKnown RBP12.48□□□□□ -0.41
CTCFL-206ENST00000426658 RBSNQ9H1K0 784 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 MBD3O95983 291 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 ZNF445P59923 1031 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 IQSEC2Q5JU85 1478 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 FAM83GA6ND36 823 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 HMMRO75330 724 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 NCOA3Q9Y6Q9 1424 aa12.48□□□□□ -0.41
CTCFL-206ENST00000426658 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
CTCFL-206ENST00000426658 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.47□□□□□ -0.41
CTCFL-206ENST00000426658 KIF2CQ99661 725 aa12.47□□□□□ -0.41
CTCFL-206ENST00000426658 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
CTCFL-206ENST00000426658 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
CTCFL-206ENST00000426658 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
CTCFL-206ENST00000426658 PHF14O94880 888 aa12.46□□□□□ -0.41
CTCFL-206ENST00000426658 NEK4P51957 841 aa12.46□□□□□ -0.41
CTCFL-206ENST00000426658 MRPL50Q8N5N7 158 aaKnown RBP12.46□□□□□ -0.41
CTCFL-206ENST00000426658 MYOM2P54296 1465 aa12.46□□□□□ -0.41
CTCFL-206ENST00000426658 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
CTCFL-206ENST00000426658 ARHGAP45Q92619 1136 aa12.46□□□□□ -0.41
CTCFL-206ENST00000426658 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.42
CTCFL-206ENST00000426658 IDI1Q13907 227 aa12.46□□□□□ -0.42
CTCFL-206ENST00000426658 ZKSCAN5Q9Y2L8 839 aa12.46□□□□□ -0.42
CTCFL-206ENST00000426658 TTC22Q5TAA0 569 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 LMBRD1Q9NUN5 540 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 MYOM1P52179 1685 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 FYB1O15117 783 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 VAMP4O75379 141 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 TERF1P54274 439 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
CTCFL-206ENST00000426658 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 NPHP1O15259 732 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 AMPHP49418 695 aa12.45□□□□□ -0.42
CTCFL-206ENST00000426658 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-206ENST00000426658 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 PLEKHM2Q8IWE5 1019 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-206ENST00000426658 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
CTCFL-206ENST00000426658 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-206ENST00000426658 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 ERC2O15083 957 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 MCM5P33992 734 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 TSHZ3Q63HK5 1081 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 SASS6Q6UVJ0 657 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 NAP1L2Q9ULW6 460 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-206ENST00000426658 CEP152O94986 1710 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 NME9Q86XW9 330 aa12.44□□□□□ -0.42
CTCFL-206ENST00000426658 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 EIF2S2P20042 333 aaKnown RBP12.43□□□□□ -0.42
CTCFL-206ENST00000426658 PIP4K2BP78356 416 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 PKP1Q13835 747 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 MCM10Q7L590 875 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 CFAP65Q6ZU64 1925 aaKnown RBP12.43□□□□□ -0.42
CTCFL-206ENST00000426658 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 DYNC1I1O14576 645 aa12.43□□□□□ -0.42
CTCFL-206ENST00000426658 FBXO31Q5XUX0 539 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-206ENST00000426658 IFT57Q9NWB7 429 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms