RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 TTC39AQ5SRH9 613 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 MPHOSPH8Q99549 860 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 C22orf23Q9BZE7 217 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 ATP10BO94823 1461 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 TTC21AQ8NDW8 1320 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 IDI1Q13907 227 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 RABEP1Q15276 862 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
SP1-202ENST00000426431 ALDH1L2Q3SY69 923 aa12.21□□□□□ -0.45
SP1-202ENST00000426431 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
SP1-202ENST00000426431 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
SP1-202ENST00000426431 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
SP1-202ENST00000426431 KIAA0556O60303 1618 aa12.21□□□□□ -0.45
SP1-202ENST00000426431 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.46
SP1-202ENST00000426431 RAD21O60216 631 aa12.21□□□□□ -0.46
SP1-202ENST00000426431 DHX8Q14562 1220 aaKnown RBP12.21□□□□□ -0.46
SP1-202ENST00000426431 NAT10Q9H0A0 1025 aaKnown RBP12.21□□□□□ -0.46
SP1-202ENST00000426431 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
SP1-202ENST00000426431 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
SP1-202ENST00000426431 MSH6P52701 1360 aa12.2□□□□□ -0.46
SP1-202ENST00000426431 ANKRD36BQ8N2N9 1353 aa12.2□□□□□ -0.46
SP1-202ENST00000426431 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
SP1-202ENST00000426431 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
SP1-202ENST00000426431 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
SP1-202ENST00000426431 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
SP1-202ENST00000426431 WDR62O43379 1518 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 CEP126Q9P2H0 1117 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 NUTM2AQ8IVF1 878 aaPredicted RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
SP1-202ENST00000426431 KRT32Q14532 448 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
SP1-202ENST00000426431 RAB11FIP3O75154 756 aa12.18□□□□□ -0.46
SP1-202ENST00000426431 TMPOP42166 694 aaKnown RBP12.18□□□□□ -0.46
SP1-202ENST00000426431 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
SP1-202ENST00000426431 CREBRFQ8IUR6 639 aa12.18□□□□□ -0.46
SP1-202ENST00000426431 TXLNAP40222 546 aa12.18□□□□□ -0.46
SP1-202ENST00000426431 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
SP1-202ENST00000426431 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
SP1-202ENST00000426431 NOS1P29475 1434 aa12.18□□□□□ -0.46
SP1-202ENST00000426431 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
SP1-202ENST00000426431 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
SP1-202ENST00000426431 SASS6Q6UVJ0 657 aa12.17□□□□□ -0.46
SP1-202ENST00000426431 ZNF396Q96N95 335 aaPredicted RBP12.17□□□□□ -0.46
SP1-202ENST00000426431 CDKL5O76039 1030 aa12.17□□□□□ -0.46
SP1-202ENST00000426431 R3HCC1Q9Y3T6 440 aaKnown RBP12.17□□□□□ -0.46
SP1-202ENST00000426431 NUP153P49790 1475 aaKnown RBP12.17□□□□□ -0.46
SP1-202ENST00000426431 MBD3O95983 291 aa12.16□□□□□ -0.46
SP1-202ENST00000426431 AEBP1Q8IUX7 1158 aa12.16□□□□□ -0.46
SP1-202ENST00000426431 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
SP1-202ENST00000426431 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
SP1-202ENST00000426431 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
SP1-202ENST00000426431 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
SP1-202ENST00000426431 HYPKQ9NX55 129 aa12.16□□□□□ -0.46
SP1-202ENST00000426431 A0A087WZG4 1122 aa12.15□□□□□ -0.46
SP1-202ENST00000426431 NPHP3Q7Z494 1330 aa12.15□□□□□ -0.46
SP1-202ENST00000426431 RALGAPBQ86X10 1494 aa12.15□□□□□ -0.46
SP1-202ENST00000426431 IL16Q14005 1332 aa12.15□□□□□ -0.46
SP1-202ENST00000426431 OLFM4Q6UX06 510 aa12.15□□□□□ -0.46
SP1-202ENST00000426431 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
SP1-202ENST00000426431 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
SP1-202ENST00000426431 DNAJC2Q99543 621 aaKnown RBP12.14□□□□□ -0.47
SP1-202ENST00000426431 TMOD2Q9NZR1 351 aa12.14□□□□□ -0.47
SP1-202ENST00000426431 A0A0U1RQG5 324 aaPredicted RBP12.14□□□□□ -0.47
SP1-202ENST00000426431 TOM1O60784 492 aa12.14□□□□□ -0.47
SP1-202ENST00000426431 ZPR1O75312 459 aa12.14□□□□□ -0.47
SP1-202ENST00000426431 IKQ13123 557 aaPredicted RBP12.14□□□□□ -0.47
SP1-202ENST00000426431 PTPRCP08575 1304 aa12.14□□□□□ -0.47
SP1-202ENST00000426431 GPS2Q13227 327 aa12.14□□□□□ -0.47
SP1-202ENST00000426431 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
SP1-202ENST00000426431 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
SP1-202ENST00000426431 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 CCAR1Q8IX12 1150 aaKnown RBP12.13□□□□□ -0.47
SP1-202ENST00000426431 ZSCAN31Q96LW9 406 aaPredicted RBP12.13□□□□□ -0.47
SP1-202ENST00000426431 KRT28Q7Z3Y7 464 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 PCMTD1Q96MG8 357 aaPredicted RBP12.13□□□□□ -0.47
SP1-202ENST00000426431 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
SP1-202ENST00000426431 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 EXOC5O00471 708 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 SLFN5Q08AF3 891 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 WASF1Q92558 559 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
SP1-202ENST00000426431 DBF4Q9UBU7 674 aaPredicted RBP12.12□□□□□ -0.47
SP1-202ENST00000426431 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
SP1-202ENST00000426431 SRGAP3O43295 1099 aa12.12□□□□□ -0.47
SP1-202ENST00000426431 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms