RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 PRR20BP86481 221 aa6.43□□□□□ -1.38
HDAC2-202ENST00000425835 PRR20AP86496 221 aa6.43□□□□□ -1.38
HDAC2-202ENST00000425835 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 FAM187AA6NFU0 413 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 SUPT5HO00267 1087 aaKnown RBP6.42□□□□□ -1.38
HDAC2-202ENST00000425835 ADH1CP00326 375 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 NBPF20Q3BBV1 942 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 HDGFL1Q5TGJ6 251 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 GLMNQ92990 594 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 KCTD15Q96SI1 283 aaPredicted RBP6.42□□□□□ -1.38
HDAC2-202ENST00000425835 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 TOR4AQ9NXH8 423 aa6.42□□□□□ -1.38
HDAC2-202ENST00000425835 NRG2O14511 850 aaPredicted RBP6.41□□□□□ -1.38
HDAC2-202ENST00000425835 GIGYF1O75420 1035 aaPredicted RBP6.41□□□□□ -1.38
HDAC2-202ENST00000425835 SOX11P35716 441 aa6.41□□□□□ -1.38
HDAC2-202ENST00000425835 ADAMTS19Q8TE59 1207 aa6.41□□□□□ -1.38
HDAC2-202ENST00000425835 CALR3Q96L12 384 aaKnown RBP6.41□□□□□ -1.38
HDAC2-202ENST00000425835 CDK15Q96Q40 435 aa6.41□□□□□ -1.38
HDAC2-202ENST00000425835 CDV3Q9UKY7 258 aaKnown RBP6.41□□□□□ -1.38
HDAC2-202ENST00000425835 SMPD1P17405 629 aa6.4□□□□□ -1.38
HDAC2-202ENST00000425835 NNTQ13423 1086 aa6.4□□□□□ -1.38
HDAC2-202ENST00000425835 ZNF592Q92610 1267 aa6.4□□□□□ -1.38
HDAC2-202ENST00000425835 ALG2Q9H553 416 aa6.4□□□□□ -1.38
HDAC2-202ENST00000425835 CEP126Q9P2H0 1117 aa6.4□□□□□ -1.38
HDAC2-202ENST00000425835 MAP4K5Q9Y4K4 846 aa6.4□□□□□ -1.38
HDAC2-202ENST00000425835 NR3C2P08235 984 aa6.39□□□□□ -1.39
HDAC2-202ENST00000425835 GRM5P41594 1212 aa6.39□□□□□ -1.39
HDAC2-202ENST00000425835 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
HDAC2-202ENST00000425835 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
HDAC2-202ENST00000425835 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
HDAC2-202ENST00000425835 MPNDQ8N594 471 aa6.39□□□□□ -1.39
HDAC2-202ENST00000425835 PIK3CDO00329 1044 aa6.38□□□□□ -1.39
HDAC2-202ENST00000425835 NR5A1Q13285 461 aa6.38□□□□□ -1.39
HDAC2-202ENST00000425835 PKDCCQ504Y2 493 aa6.38□□□□□ -1.39
HDAC2-202ENST00000425835 RNF135Q8IUD6 432 aa6.38□□□□□ -1.39
HDAC2-202ENST00000425835 CCDC116Q8IYX3 515 aa6.38□□□□□ -1.39
HDAC2-202ENST00000425835 HPS1Q92902 700 aa6.38□□□□□ -1.39
HDAC2-202ENST00000425835 TMPRSS4Q9NRS4 437 aa6.37□□□□□ -1.39
HDAC2-202ENST00000425835 PCDHB11Q9Y5F2 797 aa6.37□□□□□ -1.39
HDAC2-202ENST00000425835 ESPNB1AK53 854 aa6.36□□□□□ -1.39
HDAC2-202ENST00000425835 ERVH48-1M5A8F1 160 aa6.36□□□□□ -1.39
HDAC2-202ENST00000425835 SKIP12755 728 aa6.36□□□□□ -1.39
HDAC2-202ENST00000425835 WDR4P57081 412 aaKnown RBP6.36□□□□□ -1.39
HDAC2-202ENST00000425835 PPP1R26Q5T8A7 1209 aaPredicted RBP6.36□□□□□ -1.39
HDAC2-202ENST00000425835 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
HDAC2-202ENST00000425835 ZIC2O95409 532 aaPredicted RBP6.35□□□□□ -1.39
HDAC2-202ENST00000425835 DHX9Q08211 1270 aaKnown RBP6.35□□□□□ -1.39
HDAC2-202ENST00000425835 TSGA10IPQ3SY00 556 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 OXLD1Q5BKU9 147 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 CCDC85AQ96PX6 553 aaPredicted RBP6.35□□□□□ -1.39
HDAC2-202ENST00000425835 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 C1orf115Q9H7X2 142 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 ZFAND3Q9H8U3 227 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 CYLDQ9NQC7 956 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 DOLKQ9UPQ8 538 aa6.35□□□□□ -1.39
HDAC2-202ENST00000425835 DGAT1O75907 488 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 TBC1D9Q6ZT07 1266 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 SEPT12Q8IYM1 358 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 DEPDC4Q8N2C3 294 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 ZNF784Q8NCA9 323 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-202ENST00000425835 ITPKCQ96DU7 683 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 CCDC97Q96F63 343 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-202ENST00000425835 ARID3AQ99856 593 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 CDCA7Q9BWT1 371 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-202ENST00000425835 PGPEP1Q9NXJ5 209 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 EMILIN1Q9Y6C2 1016 aa6.34□□□□□ -1.39
HDAC2-202ENST00000425835 PHTF2Q8N3S3 785 aa6.33□□□□□ -1.4
HDAC2-202ENST00000425835 CCDC82Q8N4S0 544 aa6.33□□□□□ -1.4
HDAC2-202ENST00000425835 ESF1Q9H501 851 aaKnown RBP6.33□□□□□ -1.4
HDAC2-202ENST00000425835 USP17L5A8MUK1 530 aa6.32□□□□□ -1.4
HDAC2-202ENST00000425835 CAPN5O15484 640 aaPredicted RBP6.32□□□□□ -1.4
HDAC2-202ENST00000425835 TIMP2P16035 220 aa6.32□□□□□ -1.4
HDAC2-202ENST00000425835 SCTRP47872 440 aa6.32□□□□□ -1.4
HDAC2-202ENST00000425835 CBLBQ13191 982 aa6.32□□□□□ -1.4
HDAC2-202ENST00000425835 TFIP11Q9UBB9 837 aaKnown RBP6.32□□□□□ -1.4
HDAC2-202ENST00000425835 PALM3A6NDB9 673 aaPredicted RBP6.31□□□□□ -1.4
HDAC2-202ENST00000425835 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
HDAC2-202ENST00000425835 ATP9BO43861 1147 aa6.31□□□□□ -1.4
HDAC2-202ENST00000425835 RFX1P22670 979 aa6.31□□□□□ -1.4
HDAC2-202ENST00000425835 MYT1Q01538 1121 aa6.31□□□□□ -1.4
HDAC2-202ENST00000425835 PPP1R12CQ9BZL4 782 aa6.31□□□□□ -1.4
HDAC2-202ENST00000425835 USP17L3A6NCW0 530 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 USP17L4A6NCW7 530 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 AXIN1O15169 862 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 MYCP01106 439 aaPredicted RBP6.3□□□□□ -1.4
HDAC2-202ENST00000425835 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
HDAC2-202ENST00000425835 NCOA4Q13772 614 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 USP17L2Q6R6M4 530 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 USP17L1Q7RTZ2 530 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 AGBL1Q96MI9 1066 aa6.3□□□□□ -1.4
HDAC2-202ENST00000425835 KLF16Q9BXK1 252 aaPredicted RBP6.3□□□□□ -1.4
HDAC2-202ENST00000425835 LILRA1O75019 489 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 AVPP01185 164 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 BMP1P13497 986 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 EML3Q32P44 896 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 MAP7D1Q3KQU3 841 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 CCDC125Q86Z20 511 aa6.29□□□□□ -1.4
HDAC2-202ENST00000425835 NFATC2IPQ8NCF5 419 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms