RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CD163L1Q9NR16 1453 aa18.12■□□□□ 0.49
MSH5-206ENST00000423982 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
MSH5-206ENST00000423982 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
MSH5-206ENST00000423982 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
MSH5-206ENST00000423982 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
MSH5-206ENST00000423982 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
MSH5-206ENST00000423982 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.492e-10■■■□□ 16.7
MSH5-206ENST00000423982 FSD2A1L4K1 749 aa18.1■□□□□ 0.49
MSH5-206ENST00000423982 FBLN1P23142 703 aa18.1■□□□□ 0.49
MSH5-206ENST00000423982 STRCQ7RTU9 1775 aa18.1■□□□□ 0.49
MSH5-206ENST00000423982 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
MSH5-206ENST00000423982 ACEP12821 1306 aa18.09■□□□□ 0.49
MSH5-206ENST00000423982 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
MSH5-206ENST00000423982 NGDNQ8NEJ9 315 aaKnown RBP18.09■□□□□ 0.49
MSH5-206ENST00000423982 TRAK2O60296 914 aa18.09■□□□□ 0.49
MSH5-206ENST00000423982 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
MSH5-206ENST00000423982 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
MSH5-206ENST00000423982 NME9Q86XW9 330 aa18.08■□□□□ 0.48
MSH5-206ENST00000423982 NALCNQ8IZF0 1738 aa18.08■□□□□ 0.48
MSH5-206ENST00000423982 SOX12O15370 315 aa18.07■□□□□ 0.48
MSH5-206ENST00000423982 TRIM27P14373 513 aa18.07■□□□□ 0.48
MSH5-206ENST00000423982 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
MSH5-206ENST00000423982 ESCO1Q5FWF5 840 aa18.07■□□□□ 0.48
MSH5-206ENST00000423982 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
MSH5-206ENST00000423982 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
MSH5-206ENST00000423982 FYB1O15117 783 aa18.07■□□□□ 0.48
MSH5-206ENST00000423982 XPCQ01831 940 aaPredicted RBP18.07■□□□□ 0.48
MSH5-206ENST00000423982 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
MSH5-206ENST00000423982 CHMP5Q9NZZ3 219 aa18.06■□□□□ 0.48
MSH5-206ENST00000423982 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
MSH5-206ENST00000423982 ADGRB2O60241 1585 aa18.05■□□□□ 0.48
MSH5-206ENST00000423982 AAMPQ13685 434 aa18.05■□□□□ 0.48
MSH5-206ENST00000423982 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
MSH5-206ENST00000423982 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
MSH5-206ENST00000423982 STRCP1A6NGW2 1772 aa18.05■□□□□ 0.48
MSH5-206ENST00000423982 ADGRL3Q9HAR2 1447 aa18.04■□□□□ 0.48
MSH5-206ENST00000423982 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
MSH5-206ENST00000423982 NAP1L5Q96NT1 182 aaPredicted RBP18.04■□□□□ 0.48
MSH5-206ENST00000423982 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
MSH5-206ENST00000423982 ZNF692Q9BU19 519 aaPredicted RBP18.04■□□□□ 0.48
MSH5-206ENST00000423982 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
MSH5-206ENST00000423982 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
MSH5-206ENST00000423982 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
MSH5-206ENST00000423982 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
MSH5-206ENST00000423982 TMEM57Q8N5G2 664 aa18.01■□□□□ 0.47
MSH5-206ENST00000423982 CPSF1Q10570 1443 aaKnown RBP18.01■□□□□ 0.47
MSH5-206ENST00000423982 FOXO3O43524 673 aa18.01■□□□□ 0.47
MSH5-206ENST00000423982 ATF3P18847 181 aa18.01■□□□□ 0.47
MSH5-206ENST00000423982 DDX17Q92841 729 aaKnown RBP18.01■□□□□ 0.47
MSH5-206ENST00000423982 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
MSH5-206ENST00000423982 HSCBQ8IWL3 235 aa18■□□□□ 0.47
MSH5-206ENST00000423982 LNPKQ9C0E8 428 aa18■□□□□ 0.47
MSH5-206ENST00000423982 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
MSH5-206ENST00000423982 NWD1Q149M9 1564 aa18■□□□□ 0.47
MSH5-206ENST00000423982 PNNQ9H307 717 aaKnown RBP18■□□□□ 0.47
MSH5-206ENST00000423982 PHF8Q9UPP1 1060 aa18■□□□□ 0.47
MSH5-206ENST00000423982 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
MSH5-206ENST00000423982 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
MSH5-206ENST00000423982 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
MSH5-206ENST00000423982 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
MSH5-206ENST00000423982 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
MSH5-206ENST00000423982 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
MSH5-206ENST00000423982 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
MSH5-206ENST00000423982 GRPEL1Q9HAV7 217 aa17.98■□□□□ 0.47
MSH5-206ENST00000423982 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
MSH5-206ENST00000423982 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
MSH5-206ENST00000423982 TMPOP42166 694 aaKnown RBP17.97■□□□□ 0.47
MSH5-206ENST00000423982 GAS2L3Q86XJ1 694 aa17.97■□□□□ 0.47
MSH5-206ENST00000423982 SMC5Q8IY18 1101 aa17.97■□□□□ 0.47
MSH5-206ENST00000423982 CLCN1P35523 988 aa17.97■□□□□ 0.47
MSH5-206ENST00000423982 TNPO1Q92973 898 aaKnown RBP17.97■□□□□ 0.47
MSH5-206ENST00000423982 DDX19BQ9UMR2 479 aa17.97■□□□□ 0.47
MSH5-206ENST00000423982 FMN2Q9NZ56 1722 aa17.96■□□□□ 0.47
MSH5-206ENST00000423982 CD2BP2O95400 341 aaKnown RBP17.96■□□□□ 0.47
MSH5-206ENST00000423982 USP6P35125 1406 aa17.96■□□□□ 0.47
MSH5-206ENST00000423982 MRE11P49959 708 aa17.96■□□□□ 0.47
MSH5-206ENST00000423982 PSME1Q06323 249 aa17.96■□□□□ 0.47
MSH5-206ENST00000423982 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
MSH5-206ENST00000423982 TOPAZ1Q8N9V7 1692 aa17.95■□□□□ 0.46
MSH5-206ENST00000423982 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
MSH5-206ENST00000423982 COG3Q96JB2 828 aa17.95■□□□□ 0.46
MSH5-206ENST00000423982 PLEKHF1Q96S99 279 aa17.95■□□□□ 0.46
MSH5-206ENST00000423982 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
MSH5-206ENST00000423982 DDIT3P35638 169 aa17.95■□□□□ 0.46
MSH5-206ENST00000423982 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
MSH5-206ENST00000423982 MSH6P52701 1360 aa17.94■□□□□ 0.46
MSH5-206ENST00000423982 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
MSH5-206ENST00000423982 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
MSH5-206ENST00000423982 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
MSH5-206ENST00000423982 EMILIN1Q9Y6C2 1016 aa17.93■□□□□ 0.46
MSH5-206ENST00000423982 DDX11L8A8MPP1 907 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 NSD2O96028 1365 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 NCOA3Q9Y6Q9 1424 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 HSP90AB1P08238 724 aaKnown RBP17.92■□□□□ 0.46
MSH5-206ENST00000423982 RIPK4P57078 832 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 NLRP6P59044 892 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 NUCB1Q02818 461 aa17.92■□□□□ 0.46
MSH5-206ENST00000423982 RBM25P49756 843 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms