RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
CCR9-204ENST00000422395 CCDC141Q6ZP82 1450 aa9.06□□□□□ -0.96
CCR9-204ENST00000422395 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
CCR9-204ENST00000422395 PTPRKQ15262 1439 aa9.06□□□□□ -0.96
CCR9-204ENST00000422395 KIF7Q2M1P5 1343 aa9.06□□□□□ -0.96
CCR9-204ENST00000422395 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
CCR9-204ENST00000422395 RALBP1Q15311 655 aa9.05□□□□□ -0.96
CCR9-204ENST00000422395 L1TD1Q5T7N2 865 aaKnown RBP9.05□□□□□ -0.96
CCR9-204ENST00000422395 GGT6Q6P531 493 aa9.05□□□□□ -0.96
CCR9-204ENST00000422395 PACS2Q86VP3 889 aa9.05□□□□□ -0.96
CCR9-204ENST00000422395 RTEL1-TNFRSF6BF6WH68 1400 aa9.05□□□□□ -0.96
CCR9-204ENST00000422395 LRPPRCP42704 1394 aaKnown RBP9.05□□□□□ -0.96
CCR9-204ENST00000422395 DPYSL4O14531 572 aa9.05□□□□□ -0.96
CCR9-204ENST00000422395 SPATA31D1Q6ZQQ2 1576 aa9.04□□□□□ -0.96
CCR9-204ENST00000422395 KDM5DQ9BY66 1539 aa9.04□□□□□ -0.96
CCR9-204ENST00000422395 FAM135AQ9P2D6 1515 aa9.04□□□□□ -0.96
CCR9-204ENST00000422395 KIF15Q9NS87 1388 aa9.04□□□□□ -0.96
CCR9-204ENST00000422395 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
CCR9-204ENST00000422395 ARHGEF5Q12774 1597 aa9.04□□□□□ -0.96
CCR9-204ENST00000422395 DHX29Q7Z478 1369 aaKnown RBP9.03□□□□□ -0.96
CCR9-204ENST00000422395 PPP4CP60510 307 aa9.03□□□□□ -0.96
CCR9-204ENST00000422395 NFKBIBQ15653 356 aa9.03□□□□□ -0.96
CCR9-204ENST00000422395 CCDC184Q52MB2 194 aa9.03□□□□□ -0.96
CCR9-204ENST00000422395 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
CCR9-204ENST00000422395 DDX12PQ92771 950 aa9.03□□□□□ -0.96
CCR9-204ENST00000422395 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.96
CCR9-204ENST00000422395 DISP3Q9P2K9 1392 aa9.02□□□□□ -0.97
CCR9-204ENST00000422395 ZC3H13Q5T200 1668 aaKnown RBP9.02□□□□□ -0.97
CCR9-204ENST00000422395 MAP3K7O43318 606 aa9.02□□□□□ -0.97
CCR9-204ENST00000422395 TMC1Q8TDI8 760 aa9.02□□□□□ -0.97
CCR9-204ENST00000422395 L3MBTL2Q969R5 705 aa9.02□□□□□ -0.97
CCR9-204ENST00000422395 MPHOSPH9Q99550 1183 aa9.02□□□□□ -0.97
CCR9-204ENST00000422395 RCAN3Q9UKA8 241 aa9.02□□□□□ -0.97
CCR9-204ENST00000422395 LAS1LQ9Y4W2 734 aaKnown RBP9.02□□□□□ -0.97
CCR9-204ENST00000422395 ANKRD30BQ9BXX2 1392 aa9.01□□□□□ -0.97
CCR9-204ENST00000422395 MYBBP1AQ9BQG0 1328 aaKnown RBP9.01□□□□□ -0.97
CCR9-204ENST00000422395 PZPP20742 1482 aa9.01□□□□□ -0.97
CCR9-204ENST00000422395 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
CCR9-204ENST00000422395 EIF5BO60841 1220 aaKnown RBP9.01□□□□□ -0.97
CCR9-204ENST00000422395 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
CCR9-204ENST00000422395 ZNF335Q9H4Z2 1342 aaPredicted RBP9□□□□□ -0.97
CCR9-204ENST00000422395 NEURL4Q96JN8 1562 aa9□□□□□ -0.97
CCR9-204ENST00000422395 KIF3BO15066 747 aa9□□□□□ -0.97
CCR9-204ENST00000422395 GFRA3O60609 400 aa9□□□□□ -0.97
CCR9-204ENST00000422395 TNRQ92752 1358 aa8.99□□□□□ -0.97
CCR9-204ENST00000422395 CFAP65Q6ZU64 1925 aaKnown RBP8.99□□□□□ -0.97
CCR9-204ENST00000422395 EIF2AK4Q9P2K8 1649 aaKnown RBP8.99□□□□□ -0.97
CCR9-204ENST00000422395 MAST1Q9Y2H9 1570 aa8.99□□□□□ -0.97
CCR9-204ENST00000422395 CENPQQ7L2Z9 268 aaPredicted RBP8.99□□□□□ -0.97
CCR9-204ENST00000422395 CEP152O94986 1710 aa8.98□□□□□ -0.97
CCR9-204ENST00000422395 CROCC2H7BZ55 1655 aa8.98□□□□□ -0.97
CCR9-204ENST00000422395 CCDC144AA2RUR9 1427 aa8.98□□□□□ -0.97
CCR9-204ENST00000422395 HDGFP51858 240 aaKnown RBP8.98□□□□□ -0.97
CCR9-204ENST00000422395 FAM161AQ3B820 660 aa8.98□□□□□ -0.97
CCR9-204ENST00000422395 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
CCR9-204ENST00000422395 PKNOX2Q96KN3 472 aa8.98□□□□□ -0.97
CCR9-204ENST00000422395 RRP9O43818 475 aaKnown RBP8.97□□□□□ -0.97
CCR9-204ENST00000422395 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.97□□□□□ -0.97
CCR9-204ENST00000422395 FRAT1Q92837 279 aaPredicted RBP8.97□□□□□ -0.97
CCR9-204ENST00000422395 BRPF3Q9ULD4 1205 aa8.97□□□□□ -0.97
CCR9-204ENST00000422395 EIF3AQ14152 1382 aaKnown RBP8.97□□□□□ -0.97
CCR9-204ENST00000422395 NLRP1Q9C000 1473 aa8.97□□□□□ -0.97
CCR9-204ENST00000422395 UGGT1Q9NYU2 1555 aa8.97□□□□□ -0.97
CCR9-204ENST00000422395 IQGAP1P46940 1657 aa8.97□□□□□ -0.97
CCR9-204ENST00000422395 ABCC3O15438 1527 aa8.96□□□□□ -0.97
CCR9-204ENST00000422395 DEPDC5O75140 1603 aa8.96□□□□□ -0.97
CCR9-204ENST00000422395 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 RNF40O75150 1001 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 TSPY4P0CV99 314 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 TSPY10P0CW01 314 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 BECN1Q14457 450 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
CCR9-204ENST00000422395 EXOC6Q8TAG9 804 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 ISY1Q9ULR0 285 aaKnown RBP8.96□□□□□ -0.98
CCR9-204ENST00000422395 USP47Q96K76 1375 aa8.96□□□□□ -0.98
CCR9-204ENST00000422395 CPS1P31327 1500 aa8.95□□□□□ -0.98
CCR9-204ENST00000422395 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
CCR9-204ENST00000422395 NLRP13Q86W25 1043 aa8.95□□□□□ -0.98
CCR9-204ENST00000422395 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
CCR9-204ENST00000422395 RALGAPBQ86X10 1494 aa8.94□□□□□ -0.98
CCR9-204ENST00000422395 UBR1Q8IWV7 1749 aa8.94□□□□□ -0.98
CCR9-204ENST00000422395 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
CCR9-204ENST00000422395 ILDR2Q71H61 639 aa8.94□□□□□ -0.98
CCR9-204ENST00000422395 PRKD2Q9BZL6 878 aa8.94□□□□□ -0.98
CCR9-204ENST00000422395 WDR70Q9NW82 654 aa8.94□□□□□ -0.98
CCR9-204ENST00000422395 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
CCR9-204ENST00000422395 SHANK2Q9UPX8 1470 aa8.93□□□□□ -0.98
CCR9-204ENST00000422395 DUOX2Q9NRD8 1548 aa8.93□□□□□ -0.98
CCR9-204ENST00000422395 SAMD7Q7Z3H4 446 aa8.93□□□□□ -0.98
CCR9-204ENST00000422395 PRDM15P57071 1507 aaPredicted RBP8.92□□□□□ -0.98
CCR9-204ENST00000422395 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
CCR9-204ENST00000422395 TSR1Q2NL82 804 aaKnown RBP8.92□□□□□ -0.98
CCR9-204ENST00000422395 NBPF8Q3BBV2 869 aa8.92□□□□□ -0.98
CCR9-204ENST00000422395 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
CCR9-204ENST00000422395 THEMISQ8N1K5 641 aaPredicted RBP8.92□□□□□ -0.98
CCR9-204ENST00000422395 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
CCR9-204ENST00000422395 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
CCR9-204ENST00000422395 SYNMO15061 1565 aa8.92□□□□□ -0.98
CCR9-204ENST00000422395 MED14O60244 1454 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms