RNA–Protein interactions for RNA: ENST00000421516.1

MYD88-204, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MYD88, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-204ENST00000421516 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
MYD88-204ENST00000421516 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
MYD88-204ENST00000421516 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
MYD88-204ENST00000421516 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
MYD88-204ENST00000421516 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
MYD88-204ENST00000421516 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
MYD88-204ENST00000421516 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
MYD88-204ENST00000421516 NEFMP07197 916 aa17.24■□□□□ 0.35
MYD88-204ENST00000421516 NGDNQ8NEJ9 315 aaKnown RBP17.24■□□□□ 0.35
MYD88-204ENST00000421516 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
MYD88-204ENST00000421516 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
MYD88-204ENST00000421516 SSH2Q76I76 1423 aa17.24■□□□□ 0.35
MYD88-204ENST00000421516 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
MYD88-204ENST00000421516 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
MYD88-204ENST00000421516 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
MYD88-204ENST00000421516 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
MYD88-204ENST00000421516 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
MYD88-204ENST00000421516 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
MYD88-204ENST00000421516 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
MYD88-204ENST00000421516 IL13P35225 146 aa17.21■□□□□ 0.35
MYD88-204ENST00000421516 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.35
MYD88-204ENST00000421516 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
MYD88-204ENST00000421516 IPO9Q96P70 1041 aaKnown RBP17.21■□□□□ 0.35
MYD88-204ENST00000421516 FCHSD2O94868 740 aa17.2■□□□□ 0.34
MYD88-204ENST00000421516 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
MYD88-204ENST00000421516 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
MYD88-204ENST00000421516 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
MYD88-204ENST00000421516 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
MYD88-204ENST00000421516 TRIM27P14373 513 aa17.19■□□□□ 0.34
MYD88-204ENST00000421516 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
MYD88-204ENST00000421516 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
MYD88-204ENST00000421516 TSPYL6Q8N831 410 aa17.19■□□□□ 0.34
MYD88-204ENST00000421516 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
MYD88-204ENST00000421516 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
MYD88-204ENST00000421516 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
MYD88-204ENST00000421516 ZKSCAN2Q63HK3 967 aa17.18■□□□□ 0.34
MYD88-204ENST00000421516 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
MYD88-204ENST00000421516 MS4A1P11836 297 aa17.17■□□□□ 0.34
MYD88-204ENST00000421516 DZIP1LQ8IYY4 767 aaKnown RBP17.17■□□□□ 0.34
MYD88-204ENST00000421516 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
MYD88-204ENST00000421516 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
MYD88-204ENST00000421516 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
MYD88-204ENST00000421516 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
MYD88-204ENST00000421516 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
MYD88-204ENST00000421516 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
MYD88-204ENST00000421516 C8orf34Q49A92 452 aa17.14■□□□□ 0.34
MYD88-204ENST00000421516 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
MYD88-204ENST00000421516 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
MYD88-204ENST00000421516 MCM10Q7L590 875 aa17.14■□□□□ 0.33
MYD88-204ENST00000421516 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
MYD88-204ENST00000421516 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
MYD88-204ENST00000421516 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
MYD88-204ENST00000421516 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
MYD88-204ENST00000421516 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
MYD88-204ENST00000421516 USP54Q70EL1 1684 aa17.12■□□□□ 0.33
MYD88-204ENST00000421516 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
MYD88-204ENST00000421516 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
MYD88-204ENST00000421516 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
MYD88-204ENST00000421516 FOXO3O43524 673 aa17.11■□□□□ 0.33
MYD88-204ENST00000421516 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
MYD88-204ENST00000421516 NLRP6P59044 892 aa17.1■□□□□ 0.33
MYD88-204ENST00000421516 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
MYD88-204ENST00000421516 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
MYD88-204ENST00000421516 HSPA2P54652 639 aa17.1■□□□□ 0.33
MYD88-204ENST00000421516 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
MYD88-204ENST00000421516 PDZRN3Q9UPQ7 1066 aa17.1■□□□□ 0.33
MYD88-204ENST00000421516 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
MYD88-204ENST00000421516 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
MYD88-204ENST00000421516 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
MYD88-204ENST00000421516 SEC24BO95487 1268 aa17.09■□□□□ 0.33
MYD88-204ENST00000421516 AMPHP49418 695 aa17.08■□□□□ 0.33
MYD88-204ENST00000421516 ABTB2Q8N961 1025 aa17.08■□□□□ 0.32
MYD88-204ENST00000421516 DLG5Q8TDM6 1919 aa17.07■□□□□ 0.32
MYD88-204ENST00000421516 SBNO1A3KN83 1393 aa17.06■□□□□ 0.32
MYD88-204ENST00000421516 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
MYD88-204ENST00000421516 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
MYD88-204ENST00000421516 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
MYD88-204ENST00000421516 IL16Q14005 1332 aa17.06■□□□□ 0.32
MYD88-204ENST00000421516 VAMP4O75379 141 aa17.05■□□□□ 0.32
MYD88-204ENST00000421516 PSME1Q06323 249 aa17.05■□□□□ 0.32
MYD88-204ENST00000421516 FLT4P35916 1363 aa17.05■□□□□ 0.32
MYD88-204ENST00000421516 GNAI1P63096 354 aa17.04■□□□□ 0.32
MYD88-204ENST00000421516 ORAI2Q96SN7 254 aa17.04■□□□□ 0.32
MYD88-204ENST00000421516 C19orf44Q9H6X5 657 aa17.04■□□□□ 0.32
MYD88-204ENST00000421516 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
MYD88-204ENST00000421516 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
MYD88-204ENST00000421516 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
MYD88-204ENST00000421516 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
MYD88-204ENST00000421516 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
MYD88-204ENST00000421516 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
MYD88-204ENST00000421516 TMEM94Q12767 1356 aa17.02■□□□□ 0.32
MYD88-204ENST00000421516 STRCQ7RTU9 1775 aa17.02■□□□□ 0.32
MYD88-204ENST00000421516 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
MYD88-204ENST00000421516 LTN1O94822 1766 aa17.02■□□□□ 0.32
MYD88-204ENST00000421516 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.31
MYD88-204ENST00000421516 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.31
MYD88-204ENST00000421516 NECTIN2Q92692 538 aa17.02■□□□□ 0.31
MYD88-204ENST00000421516 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
MYD88-204ENST00000421516 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
MYD88-204ENST00000421516 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms