RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 SENP3Q9H4L4 574 aaPredicted RBP11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 SLIT1O75093 1534 aa11.12□□□□□ -0.63
TRIM49D1-201ENST00000420869 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
TRIM49D1-201ENST00000420869 TNRQ92752 1358 aa11.12□□□□□ -0.63
TRIM49D1-201ENST00000420869 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 SMC5Q8IY18 1101 aa11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 TBC1D32Q96NH3 1257 aa11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 CHD2O14647 1828 aaKnown RBP11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 PRKAR2BP31323 418 aa11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 IL13P35225 146 aa11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
TRIM49D1-201ENST00000420869 TMEM2Q9UHN6 1383 aa11.1□□□□□ -0.63
TRIM49D1-201ENST00000420869 ARHGAP23Q9P227 1491 aa11.1□□□□□ -0.63
TRIM49D1-201ENST00000420869 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
TRIM49D1-201ENST00000420869 ZBTB40Q9NUA8 1239 aa11.1□□□□□ -0.63
TRIM49D1-201ENST00000420869 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
TRIM49D1-201ENST00000420869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIM49D1-201ENST00000420869 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
TRIM49D1-201ENST00000420869 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
TRIM49D1-201ENST00000420869 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 EMILIN1Q9Y6C2 1016 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 PRR36Q9H6K5 1346 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 NME9Q86XW9 330 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 ITPRIPQ8IWB1 547 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 PHACTR3Q96KR7 559 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
TRIM49D1-201ENST00000420869 ROBO2Q9HCK4 1378 aa11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 SSH2Q76I76 1423 aa11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 RGPD2P0DJD1 1756 aa11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 BECN1Q14457 450 aa11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 ABCC4O15439 1325 aa11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 USP6P35125 1406 aa11.07□□□□□ -0.64
TRIM49D1-201ENST00000420869 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 KIF24Q5T7B8 1368 aa11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 VAMP4O75379 141 aa11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 FBLN1P23142 703 aa11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 GNAI1P63096 354 aa11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 KDM3BQ7LBC6 1761 aa11.06□□□□□ -0.64
TRIM49D1-201ENST00000420869 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
TRIM49D1-201ENST00000420869 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
TRIM49D1-201ENST00000420869 USP31Q70CQ4 1352 aa11.05□□□□□ -0.64
TRIM49D1-201ENST00000420869 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
TRIM49D1-201ENST00000420869 RGS12O14924 1447 aa11.05□□□□□ -0.64
TRIM49D1-201ENST00000420869 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 GSE1Q14687 1217 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 TXNDC2Q86VQ3 553 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 HMOX1P09601 288 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 NUCB1Q02818 461 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 MLECQ14165 292 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 COG3Q96JB2 828 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 MBIPQ9NS73 344 aa11.04□□□□□ -0.64
TRIM49D1-201ENST00000420869 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
TRIM49D1-201ENST00000420869 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
TRIM49D1-201ENST00000420869 LMO7Q8WWI1 1683 aa11.03□□□□□ -0.64
TRIM49D1-201ENST00000420869 NCKAP5LQ9HCH0 1330 aa11.02□□□□□ -0.64
TRIM49D1-201ENST00000420869 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.64
TRIM49D1-201ENST00000420869 TBC1D2Q9BYX2 928 aa11.02□□□□□ -0.64
TRIM49D1-201ENST00000420869 CHMP4BQ9H444 224 aaKnown RBP11.02□□□□□ -0.64
TRIM49D1-201ENST00000420869 NWD1Q149M9 1564 aa11.02□□□□□ -0.65
TRIM49D1-201ENST00000420869 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
TRIM49D1-201ENST00000420869 TTC21BQ7Z4L5 1316 aa11.02□□□□□ -0.65
TRIM49D1-201ENST00000420869 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
TRIM49D1-201ENST00000420869 TSPYL6Q8N831 410 aa11.01□□□□□ -0.65
TRIM49D1-201ENST00000420869 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
TRIM49D1-201ENST00000420869 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
TRIM49D1-201ENST00000420869 ARHGEF10O15013 1369 aa11□□□□□ -0.65
TRIM49D1-201ENST00000420869 KIAA0232Q92628 1395 aa11□□□□□ -0.65
TRIM49D1-201ENST00000420869 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
TRIM49D1-201ENST00000420869 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
TRIM49D1-201ENST00000420869 GCC1Q96CN9 775 aa11□□□□□ -0.65
TRIM49D1-201ENST00000420869 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
TRIM49D1-201ENST00000420869 CEP170BQ9Y4F5 1589 aaPredicted RBP11□□□□□ -0.65
TRIM49D1-201ENST00000420869 CRB1P82279 1406 aa10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 RBM25P49756 843 aaKnown RBP10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 CHD1LQ86WJ1 897 aa10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 ESF1Q9H501 851 aaKnown RBP10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 KDRP35968 1356 aa10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 ACEP12821 1306 aa10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 CAMTA1Q9Y6Y1 1673 aa10.99□□□□□ -0.65
TRIM49D1-201ENST00000420869 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 BMP2KLQ5H9B9 411 aa10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 API5Q9BZZ5 524 aaKnown RBP10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 TTC21AQ8NDW8 1320 aa10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 RGPD5Q99666 1765 aa10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 ANKARQ7Z5J8 1434 aa10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 SIRT2Q8IXJ6 389 aa10.98□□□□□ -0.65
TRIM49D1-201ENST00000420869 MED1Q15648 1581 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms