RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 ACEP12821 1306 aa24.29■■□□□ 1.48
CROCCP3-202ENST00000420820 HMOX1P09601 288 aa24.29■■□□□ 1.48
CROCCP3-202ENST00000420820 RGS3P49796 1198 aa24.29■■□□□ 1.48
CROCCP3-202ENST00000420820 XRN1Q8IZH2 1706 aaKnown RBP24.28■■□□□ 1.48
CROCCP3-202ENST00000420820 TRIM27P14373 513 aa24.27■■□□□ 1.48
CROCCP3-202ENST00000420820 RRS1Q15050 365 aaKnown RBP24.27■■□□□ 1.48
CROCCP3-202ENST00000420820 ALDH1L2Q3SY69 923 aa24.27■■□□□ 1.48
CROCCP3-202ENST00000420820 BRPF1P55201 1214 aaPredicted RBP24.27■■□□□ 1.48
CROCCP3-202ENST00000420820 ZNF428Q96B54 188 aa24.26■■□□□ 1.47
CROCCP3-202ENST00000420820 AMOTL2Q9Y2J4 779 aa24.26■■□□□ 1.47
CROCCP3-202ENST00000420820 USP31Q70CQ4 1352 aa24.26■■□□□ 1.47
CROCCP3-202ENST00000420820 RIMS1Q86UR5 1692 aaKnown RBP24.26■■□□□ 1.47
CROCCP3-202ENST00000420820 ATF7IPQ6VMQ6 1270 aa24.25■■□□□ 1.47
CROCCP3-202ENST00000420820 CALD1Q05682 793 aaKnown RBP24.25■■□□□ 1.47
CROCCP3-202ENST00000420820 THEMISQ8N1K5 641 aaPredicted RBP24.25■■□□□ 1.47
CROCCP3-202ENST00000420820 ZNF853P0CG23 659 aa24.24■■□□□ 1.47
CROCCP3-202ENST00000420820 FTSJ3Q8IY81 847 aaKnown RBP24.24■■□□□ 1.47
CROCCP3-202ENST00000420820 PEAK1Q9H792 1746 aa24.24■■□□□ 1.47
CROCCP3-202ENST00000420820 RGPD1P0DJD0 1748 aa24.23■■□□□ 1.47
CROCCP3-202ENST00000420820 IFT57Q9NWB7 429 aa24.23■■□□□ 1.47
CROCCP3-202ENST00000420820 NOB1Q9ULX3 412 aaKnown RBP24.23■■□□□ 1.47
CROCCP3-202ENST00000420820 KIF16BQ96L93 1317 aa24.23■■□□□ 1.47
CROCCP3-202ENST00000420820 RWDD1Q9H446 243 aaPredicted RBP24.22■■□□□ 1.47
CROCCP3-202ENST00000420820 RGPD8O14715 1765 aaPredicted RBP24.21■■□□□ 1.47
CROCCP3-202ENST00000420820 DDRGK1Q96HY6 314 aa24.2■■□□□ 1.46
CROCCP3-202ENST00000420820 DDX19BQ9UMR2 479 aa24.2■■□□□ 1.46
CROCCP3-202ENST00000420820 GNAI1P63096 354 aa24.2■■□□□ 1.46
CROCCP3-202ENST00000420820 ADAMTSL3P82987 1691 aa24.2■■□□□ 1.46
CROCCP3-202ENST00000420820 IPO8O15397 1037 aaKnown RBP24.19■■□□□ 1.46
CROCCP3-202ENST00000420820 LMOD3Q0VAK6 560 aa24.19■■□□□ 1.46
CROCCP3-202ENST00000420820 TTC21AQ8NDW8 1320 aa24.19■■□□□ 1.46
CROCCP3-202ENST00000420820 EIF4A2Q14240 407 aaKnown RBP24.18■■□□□ 1.46
CROCCP3-202ENST00000420820 VAMP4O75379 141 aa24.18■■□□□ 1.46
CROCCP3-202ENST00000420820 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
CROCCP3-202ENST00000420820 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
CROCCP3-202ENST00000420820 CEP170BQ9Y4F5 1589 aaPredicted RBP24.17■■□□□ 1.46
CROCCP3-202ENST00000420820 NUTM2FA1L443 756 aa24.16■■□□□ 1.46
CROCCP3-202ENST00000420820 HDAC1Q13547 482 aaPredicted RBP24.16■■□□□ 1.46
CROCCP3-202ENST00000420820 PDZRN3Q9UPQ7 1066 aa24.16■■□□□ 1.46
CROCCP3-202ENST00000420820 CFAP44Q96MT7 982 aa24.16■■□□□ 1.46
CROCCP3-202ENST00000420820 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
CROCCP3-202ENST00000420820 TMEM57Q8N5G2 664 aa24.15■■□□□ 1.46
CROCCP3-202ENST00000420820 MBIPQ9NS73 344 aa24.15■■□□□ 1.46
CROCCP3-202ENST00000420820 ZBTB40Q9NUA8 1239 aa24.14■■□□□ 1.46
CROCCP3-202ENST00000420820 ANKARQ7Z5J8 1434 aa24.14■■□□□ 1.45
CROCCP3-202ENST00000420820 ITPRIPQ8IWB1 547 aa24.14■■□□□ 1.45
CROCCP3-202ENST00000420820 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
CROCCP3-202ENST00000420820 MRPL50Q8N5N7 158 aaKnown RBP24.13■■□□□ 1.45
CROCCP3-202ENST00000420820 ARHGAP45Q92619 1136 aa24.13■■□□□ 1.45
CROCCP3-202ENST00000420820 PIK3C2AO00443 1686 aa24.12■■□□□ 1.45
CROCCP3-202ENST00000420820 USP54Q70EL1 1684 aa24.12■■□□□ 1.45
CROCCP3-202ENST00000420820 TSPYL6Q8N831 410 aa24.12■■□□□ 1.45
CROCCP3-202ENST00000420820 AEBP1Q8IUX7 1158 aa24.11■■□□□ 1.45
CROCCP3-202ENST00000420820 USP19O94966 1318 aa24.1■■□□□ 1.45
CROCCP3-202ENST00000420820 SULT6B1Q6IMI4 303 aa24.1■■□□□ 1.45
CROCCP3-202ENST00000420820 HSP90AB2PQ58FF8 381 aa24.1■■□□□ 1.45
CROCCP3-202ENST00000420820 MARF1Q9Y4F3 1742 aaKnown RBP24.09■■□□□ 1.45
CROCCP3-202ENST00000420820 FAM83GA6ND36 823 aa24.08■■□□□ 1.45
CROCCP3-202ENST00000420820 SMC5Q8IY18 1101 aa24.08■■□□□ 1.44
CROCCP3-202ENST00000420820 ARHGEF10O15013 1369 aa24.08■■□□□ 1.44
CROCCP3-202ENST00000420820 ZNF142P52746 1687 aaPredicted RBP24.07■■□□□ 1.44
CROCCP3-202ENST00000420820 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
CROCCP3-202ENST00000420820 MAP3K19Q56UN5 1328 aa24.07■■□□□ 1.44
CROCCP3-202ENST00000420820 SBNO1A3KN83 1393 aa24.06■■□□□ 1.44
CROCCP3-202ENST00000420820 KCNA6P17658 529 aa24.06■■□□□ 1.44
CROCCP3-202ENST00000420820 TWISTNBQ3B726 338 aaPredicted RBP24.06■■□□□ 1.44
CROCCP3-202ENST00000420820 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
CROCCP3-202ENST00000420820 FLT4P35916 1363 aa24.05■■□□□ 1.44
CROCCP3-202ENST00000420820 NGDNQ8NEJ9 315 aaKnown RBP24.05■■□□□ 1.44
CROCCP3-202ENST00000420820 ABCC4O15439 1325 aa24.04■■□□□ 1.44
CROCCP3-202ENST00000420820 KDRP35968 1356 aa24.04■■□□□ 1.44
CROCCP3-202ENST00000420820 DCTN1Q14203 1278 aa24.04■■□□□ 1.44
CROCCP3-202ENST00000420820 SEC24BO95487 1268 aa24.03■■□□□ 1.44
CROCCP3-202ENST00000420820 ZBTB7BO15156 539 aaPredicted RBP24.02■■□□□ 1.44
CROCCP3-202ENST00000420820 CHL1O00533 1208 aa24.02■■□□□ 1.44
CROCCP3-202ENST00000420820 NBR1Q14596 966 aa24.02■■□□□ 1.44
CROCCP3-202ENST00000420820 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
CROCCP3-202ENST00000420820 CHMP4BQ9H444 224 aaKnown RBP24■■□□□ 1.43
CROCCP3-202ENST00000420820 KIAA0232Q92628 1395 aa24■■□□□ 1.43
CROCCP3-202ENST00000420820 CRB1P82279 1406 aa24■■□□□ 1.43
CROCCP3-202ENST00000420820 ELL2O00472 640 aaPredicted RBP23.99■■□□□ 1.43
CROCCP3-202ENST00000420820 IGSF1Q8N6C5 1336 aa23.98■■□□□ 1.43
CROCCP3-202ENST00000420820 KDM4FA0A1W2PPD8 638 aa23.96■■□□□ 1.43
CROCCP3-202ENST00000420820 API5Q9BZZ5 524 aaKnown RBP23.96■■□□□ 1.43
CROCCP3-202ENST00000420820 SOX12O15370 315 aa23.95■■□□□ 1.42
CROCCP3-202ENST00000420820 NUCB1Q02818 461 aa23.95■■□□□ 1.42
CROCCP3-202ENST00000420820 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
CROCCP3-202ENST00000420820 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
CROCCP3-202ENST00000420820 MCM10Q7L590 875 aa23.94■■□□□ 1.42
CROCCP3-202ENST00000420820 NWD1Q149M9 1564 aa23.94■■□□□ 1.42
CROCCP3-202ENST00000420820 HAP1P54257 671 aaPredicted RBP23.94■■□□□ 1.42
CROCCP3-202ENST00000420820 EYA1Q99502 592 aa23.94■■□□□ 1.42
CROCCP3-202ENST00000420820 NLRP6P59044 892 aa23.93■■□□□ 1.42
CROCCP3-202ENST00000420820 SLC4A3P48751 1232 aa23.92■■□□□ 1.42
CROCCP3-202ENST00000420820 MTHFSDQ2M296 383 aaKnown RBP23.92■■□□□ 1.42
CROCCP3-202ENST00000420820 RGS12O14924 1447 aa23.92■■□□□ 1.42
CROCCP3-202ENST00000420820 AMPHP49418 695 aa23.92■■□□□ 1.42
CROCCP3-202ENST00000420820 USP35Q9P2H5 1018 aa23.92■■□□□ 1.42
CROCCP3-202ENST00000420820 LRRC37A3O60309 1634 aa23.92■■□□□ 1.42
CROCCP3-202ENST00000420820 TBC1D32Q96NH3 1257 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms