RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 IPO8O15397 1037 aaKnown RBP9.52□□□□□ -0.89
BDNF-209ENST00000420794 EIF4A2Q14240 407 aaKnown RBP9.52□□□□□ -0.89
BDNF-209ENST00000420794 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
BDNF-209ENST00000420794 IP6K1Q92551 441 aa9.52□□□□□ -0.89
BDNF-209ENST00000420794 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
BDNF-209ENST00000420794 INSRP06213 1382 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 HOXC9P31274 260 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 CHMP4BQ9H444 224 aaKnown RBP9.51□□□□□ -0.89
BDNF-209ENST00000420794 C1orf167Q5SNV9 1468 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 CABLES1Q8TDN4 633 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
BDNF-209ENST00000420794 BRINP3Q76B58 766 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 SMC4Q9NTJ3 1288 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 CDC42BPGQ6DT37 1551 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 DCCP43146 1447 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 STK31Q9BXU1 1019 aa9.5□□□□□ -0.89
BDNF-209ENST00000420794 ZNF142P52746 1687 aaPredicted RBP9.5□□□□□ -0.89
BDNF-209ENST00000420794 IL13P35225 146 aa9.49□□□□□ -0.89
BDNF-209ENST00000420794 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
BDNF-209ENST00000420794 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
BDNF-209ENST00000420794 USP35Q9P2H5 1018 aa9.49□□□□□ -0.89
BDNF-209ENST00000420794 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
BDNF-209ENST00000420794 TSPYL4Q9UJ04 414 aa9.49□□□□□ -0.89
BDNF-209ENST00000420794 KIF24Q5T7B8 1368 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 GNAT3A8MTJ3 354 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 EYA1Q99502 592 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
BDNF-209ENST00000420794 ELL2O00472 640 aaPredicted RBP9.47□□□□□ -0.89
BDNF-209ENST00000420794 HSP90AB1P08238 724 aaKnown RBP9.47□□□□□ -0.89
BDNF-209ENST00000420794 CCDC27Q2M243 656 aa9.47□□□□□ -0.89
BDNF-209ENST00000420794 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
BDNF-209ENST00000420794 CT47B1P0C2W7 299 aaPredicted RBP9.47□□□□□ -0.89
BDNF-209ENST00000420794 TTC5Q8N0Z6 440 aa9.47□□□□□ -0.89
BDNF-209ENST00000420794 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.89
BDNF-209ENST00000420794 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.89
BDNF-209ENST00000420794 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.9
BDNF-209ENST00000420794 RRP1P56182 461 aaKnown RBP9.45□□□□□ -0.9
BDNF-209ENST00000420794 ARHGEF25Q86VW2 580 aa9.45□□□□□ -0.9
BDNF-209ENST00000420794 RTL1A6NKG5 1358 aa9.45□□□□□ -0.9
BDNF-209ENST00000420794 EXOSC9Q06265 439 aaKnown RBP9.45□□□□□ -0.9
BDNF-209ENST00000420794 NCBP3Q53F19 620 aaKnown RBP9.45□□□□□ -0.9
BDNF-209ENST00000420794 IL16Q14005 1332 aa9.45□□□□□ -0.9
BDNF-209ENST00000420794 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
BDNF-209ENST00000420794 IFT57Q9NWB7 429 aa9.45□□□□□ -0.9
BDNF-209ENST00000420794 CDK12Q9NYV4 1490 aaPredicted RBP9.45□□□□□ -0.9
BDNF-209ENST00000420794 TSR2Q969E8 191 aaKnown RBP9.44□□□□□ -0.9
BDNF-209ENST00000420794 ADGRB2O60241 1585 aa9.44□□□□□ -0.9
BDNF-209ENST00000420794 BLMP54132 1417 aaPredicted RBP9.44□□□□□ -0.9
BDNF-209ENST00000420794 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
BDNF-209ENST00000420794 BCL2L13Q9BXK5 485 aa9.44□□□□□ -0.9
BDNF-209ENST00000420794 ZKSCAN2Q63HK3 967 aa9.44□□□□□ -0.9
BDNF-209ENST00000420794 ZNF428Q96B54 188 aa9.44□□□□□ -0.9
BDNF-209ENST00000420794 ARXQ96QS3 562 aa9.44□□□□□ -0.9
BDNF-209ENST00000420794 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
BDNF-209ENST00000420794 MCM10Q7L590 875 aa9.43□□□□□ -0.9
BDNF-209ENST00000420794 DDX54Q8TDD1 881 aaKnown RBP9.43□□□□□ -0.9
BDNF-209ENST00000420794 MST1RQ04912 1400 aa9.43□□□□□ -0.9
BDNF-209ENST00000420794 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
BDNF-209ENST00000420794 KIF16BQ96L93 1317 aa9.43□□□□□ -0.9
BDNF-209ENST00000420794 TNS3Q68CZ2 1445 aa9.43□□□□□ -0.9
BDNF-209ENST00000420794 THUMPD2Q9BTF0 503 aaKnown RBP9.43□□□□□ -0.9
BDNF-209ENST00000420794 DCTN1Q14203 1278 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 TWISTNBQ3B726 338 aaPredicted RBP9.42□□□□□ -0.9
BDNF-209ENST00000420794 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.42□□□□□ -0.9
BDNF-209ENST00000420794 OVOS2A0A0J9YW53 1432 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 OVOS2Q6IE36 1432 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 IFNL2Q8IZJ0 200 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 PNPLA6Q8IY17 1366 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 CABP4P57796 275 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
BDNF-209ENST00000420794 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 CLUAP1Q96AJ1 413 aa9.42□□□□□ -0.9
BDNF-209ENST00000420794 XRN1Q8IZH2 1706 aaKnown RBP9.42□□□□□ -0.9
BDNF-209ENST00000420794 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
BDNF-209ENST00000420794 PLIN1O60240 522 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 ITPRIPQ8IWB1 547 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 SYTL4Q96C24 671 aaPredicted RBP9.41□□□□□ -0.9
BDNF-209ENST00000420794 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 BTG4Q9NY30 223 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 EIF2S2P20042 333 aaKnown RBP9.41□□□□□ -0.9
BDNF-209ENST00000420794 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 API5Q9BZZ5 524 aaKnown RBP9.41□□□□□ -0.9
BDNF-209ENST00000420794 KIAA0232Q92628 1395 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 LRRC7Q96NW7 1537 aa9.41□□□□□ -0.9
BDNF-209ENST00000420794 MYOM1P52179 1685 aa9.4□□□□□ -0.9
BDNF-209ENST00000420794 BTBD11A6QL63 1104 aa9.4□□□□□ -0.9
BDNF-209ENST00000420794 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.9
BDNF-209ENST00000420794 FANCIQ9NVI1 1328 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms