RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 ZNF853P0CG23 659 aa20.66■□□□□ 0.9
CTSB-203ENST00000420692 TMEM57Q8N5G2 664 aa20.66■□□□□ 0.9
CTSB-203ENST00000420692 RWDD1Q9H446 243 aaPredicted RBP20.66■□□□□ 0.9
CTSB-203ENST00000420692 LAS1LQ9Y4W2 734 aaKnown RBP20.66■□□□□ 0.9
CTSB-203ENST00000420692 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
CTSB-203ENST00000420692 DDRGK1Q96HY6 314 aa20.66■□□□□ 0.9
CTSB-203ENST00000420692 OVOS2A0A0J9YW53 1432 aa20.65■□□□□ 0.9
CTSB-203ENST00000420692 OVOS2Q6IE36 1432 aa20.65■□□□□ 0.9
CTSB-203ENST00000420692 VAMP4O75379 141 aa20.65■□□□□ 0.9
CTSB-203ENST00000420692 TSPYL6Q8N831 410 aa20.65■□□□□ 0.9
CTSB-203ENST00000420692 USP6P35125 1406 aa20.64■□□□□ 0.89
CTSB-203ENST00000420692 SSH2Q76I76 1423 aa20.64■□□□□ 0.89
CTSB-203ENST00000420692 NEFMP07197 916 aa20.64■□□□□ 0.89
CTSB-203ENST00000420692 SLC4A3P48751 1232 aa20.64■□□□□ 0.89
CTSB-203ENST00000420692 AMOTL2Q9Y2J4 779 aa20.64■□□□□ 0.89
CTSB-203ENST00000420692 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
CTSB-203ENST00000420692 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
CTSB-203ENST00000420692 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
CTSB-203ENST00000420692 DDX19BQ9UMR2 479 aa20.63■□□□□ 0.89
CTSB-203ENST00000420692 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
CTSB-203ENST00000420692 PEAK1Q9H792 1746 aa20.63■□□□□ 0.89
CTSB-203ENST00000420692 EIF4A2Q14240 407 aaKnown RBP20.62■□□□□ 0.89
CTSB-203ENST00000420692 AEBP1Q8IUX7 1158 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 IFT57Q9NWB7 429 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 NALCNQ8IZF0 1738 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 KIF16BQ96L93 1317 aa20.62■□□□□ 0.89
CTSB-203ENST00000420692 FER1L4A9Z1Z3 1794 aa20.61■□□□□ 0.89
CTSB-203ENST00000420692 HDAC1Q13547 482 aaPredicted RBP20.61■□□□□ 0.89
CTSB-203ENST00000420692 GNAI1P63096 354 aa20.6■□□□□ 0.89
CTSB-203ENST00000420692 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
CTSB-203ENST00000420692 RGPD8O14715 1765 aaPredicted RBP20.6■□□□□ 0.89
CTSB-203ENST00000420692 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
CTSB-203ENST00000420692 IPO8O15397 1037 aaKnown RBP20.59■□□□□ 0.89
CTSB-203ENST00000420692 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
CTSB-203ENST00000420692 ZNF428Q96B54 188 aa20.59■□□□□ 0.89
CTSB-203ENST00000420692 CALD1Q05682 793 aaKnown RBP20.58■□□□□ 0.88
CTSB-203ENST00000420692 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.88
CTSB-203ENST00000420692 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.88
CTSB-203ENST00000420692 CFAP44Q96MT7 982 aa20.58■□□□□ 0.88
CTSB-203ENST00000420692 PTCH1Q13635 1447 aa20.58■□□□□ 0.88
CTSB-203ENST00000420692 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
CTSB-203ENST00000420692 RGPD1P0DJD0 1748 aa20.57■□□□□ 0.88
CTSB-203ENST00000420692 SULT6B1Q6IMI4 303 aa20.57■□□□□ 0.88
CTSB-203ENST00000420692 SMC5Q8IY18 1101 aa20.55■□□□□ 0.88
CTSB-203ENST00000420692 DIP2AQ14689 1571 aa20.55■□□□□ 0.88
CTSB-203ENST00000420692 THEMISQ8N1K5 641 aaPredicted RBP20.54■□□□□ 0.88
CTSB-203ENST00000420692 PIK3R4Q99570 1358 aa20.54■□□□□ 0.88
CTSB-203ENST00000420692 XRN1Q8IZH2 1706 aaKnown RBP20.54■□□□□ 0.88
CTSB-203ENST00000420692 LMOD3Q0VAK6 560 aa20.54■□□□□ 0.88
CTSB-203ENST00000420692 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
CTSB-203ENST00000420692 TWISTNBQ3B726 338 aaPredicted RBP20.53■□□□□ 0.88
CTSB-203ENST00000420692 ARHGAP45Q92619 1136 aa20.53■□□□□ 0.88
CTSB-203ENST00000420692 ZBTB7BO15156 539 aaPredicted RBP20.52■□□□□ 0.88
CTSB-203ENST00000420692 SOX12O15370 315 aa20.51■□□□□ 0.87
CTSB-203ENST00000420692 MAP3K19Q56UN5 1328 aa20.51■□□□□ 0.87
CTSB-203ENST00000420692 TTC21AQ8NDW8 1320 aa20.5■□□□□ 0.87
CTSB-203ENST00000420692 ABCC4O15439 1325 aa20.49■□□□□ 0.87
CTSB-203ENST00000420692 PIK3C2AO00443 1686 aa20.49■□□□□ 0.87
CTSB-203ENST00000420692 KCNA6P17658 529 aa20.49■□□□□ 0.87
CTSB-203ENST00000420692 KRT24Q2M2I5 525 aa20.48■□□□□ 0.87
CTSB-203ENST00000420692 MCM10Q7L590 875 aa20.48■□□□□ 0.87
CTSB-203ENST00000420692 FMN2Q9NZ56 1722 aa20.48■□□□□ 0.87
CTSB-203ENST00000420692 CHL1O00533 1208 aa20.47■□□□□ 0.87
CTSB-203ENST00000420692 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
CTSB-203ENST00000420692 NGDNQ8NEJ9 315 aaKnown RBP20.47■□□□□ 0.87
CTSB-203ENST00000420692 NUCB1Q02818 461 aa20.46■□□□□ 0.87
CTSB-203ENST00000420692 RIMS1Q86UR5 1692 aaKnown RBP20.46■□□□□ 0.87
CTSB-203ENST00000420692 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
CTSB-203ENST00000420692 SIRT2Q8IXJ6 389 aa20.45■□□□□ 0.86
CTSB-203ENST00000420692 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
CTSB-203ENST00000420692 MARF1Q9Y4F3 1742 aaKnown RBP20.45■□□□□ 0.86
CTSB-203ENST00000420692 CRB1P82279 1406 aa20.44■□□□□ 0.86
CTSB-203ENST00000420692 SBNO1A3KN83 1393 aa20.44■□□□□ 0.86
CTSB-203ENST00000420692 ARHGEF10O15013 1369 aa20.44■□□□□ 0.86
CTSB-203ENST00000420692 FOXO3O43524 673 aa20.44■□□□□ 0.86
CTSB-203ENST00000420692 DAXXQ9UER7 740 aaPredicted RBP20.43■□□□□ 0.86
CTSB-203ENST00000420692 CEP170BQ9Y4F5 1589 aaPredicted RBP20.43■□□□□ 0.86
CTSB-203ENST00000420692 USP35Q9P2H5 1018 aa20.43■□□□□ 0.86
CTSB-203ENST00000420692 FLT4P35916 1363 aa20.43■□□□□ 0.86
CTSB-203ENST00000420692 KDRP35968 1356 aa20.42■□□□□ 0.86
CTSB-203ENST00000420692 MTHFSDQ2M296 383 aaKnown RBP20.42■□□□□ 0.86
CTSB-203ENST00000420692 ANKARQ7Z5J8 1434 aa20.42■□□□□ 0.86
CTSB-203ENST00000420692 EYA1Q99502 592 aa20.41■□□□□ 0.86
CTSB-203ENST00000420692 RGS12O14924 1447 aa20.41■□□□□ 0.86
CTSB-203ENST00000420692 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
CTSB-203ENST00000420692 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
CTSB-203ENST00000420692 NFKBIBQ15653 356 aa20.4■□□□□ 0.86
CTSB-203ENST00000420692 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
CTSB-203ENST00000420692 API5Q9BZZ5 524 aaKnown RBP20.39■□□□□ 0.86
CTSB-203ENST00000420692 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
CTSB-203ENST00000420692 NLRP6P59044 892 aa20.39■□□□□ 0.85
CTSB-203ENST00000420692 NUTM2GQ5VZR2 741 aa20.39■□□□□ 0.85
CTSB-203ENST00000420692 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
CTSB-203ENST00000420692 KIAA0232Q92628 1395 aa20.39■□□□□ 0.85
CTSB-203ENST00000420692 AMPHP49418 695 aa20.37■□□□□ 0.85
CTSB-203ENST00000420692 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms