RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 CDK19Q9BWU1 502 aa8.41□□□□□ -1.06
AC009404.1-201ENST00000420330 QRICH2Q9H0J4 1663 aa8.41□□□□□ -1.06
AC009404.1-201ENST00000420330 PLEKHG3A1L390 1219 aa8.4□□□□□ -1.06
AC009404.1-201ENST00000420330 RNF216Q9NWF9 866 aaPredicted RBP8.4□□□□□ -1.06
AC009404.1-201ENST00000420330 CCDC61Q9Y6R9 512 aa8.4□□□□□ -1.06
AC009404.1-201ENST00000420330 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.06
AC009404.1-201ENST00000420330 CABLES1Q8TDN4 633 aa8.4□□□□□ -1.07
AC009404.1-201ENST00000420330 FRAT2O75474 233 aaPredicted RBP8.39□□□□□ -1.07
AC009404.1-201ENST00000420330 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
AC009404.1-201ENST00000420330 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
AC009404.1-201ENST00000420330 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
AC009404.1-201ENST00000420330 CALD1Q05682 793 aaKnown RBP8.39□□□□□ -1.07
AC009404.1-201ENST00000420330 ONECUT3O60422 494 aaPredicted RBP8.38□□□□□ -1.07
AC009404.1-201ENST00000420330 HSP90AA1P07900 732 aaKnown RBP8.38□□□□□ -1.07
AC009404.1-201ENST00000420330 CLCN1P35523 988 aa8.38□□□□□ -1.07
AC009404.1-201ENST00000420330 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
AC009404.1-201ENST00000420330 ACEP12821 1306 aa8.38□□□□□ -1.07
AC009404.1-201ENST00000420330 PPIP5K1Q6PFW1 1433 aa8.38□□□□□ -1.07
AC009404.1-201ENST00000420330 BLMP54132 1417 aaPredicted RBP8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 NBPF8Q3BBV2 869 aa8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 NCBP3Q53F19 620 aaKnown RBP8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 NRKQ7Z2Y5 1582 aa8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 ROCK2O75116 1388 aaKnown RBP8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
AC009404.1-201ENST00000420330 MS4A1P11836 297 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 RGS3P49796 1198 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 PRDM11Q9NQV5 511 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 CCDC9Q9Y3X0 531 aaKnown RBP8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 USP19O94966 1318 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 NAP1L5Q96NT1 182 aaPredicted RBP8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 BTG4Q9NY30 223 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 CPDO75976 1380 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 BRWD3Q6RI45 1802 aa8.36□□□□□ -1.07
AC009404.1-201ENST00000420330 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 THSD7AQ9UPZ6 1657 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 SPATA31A5Q5VU36 1347 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 SPATA31A7Q8IWB4 1347 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 NUDCQ9Y266 331 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 USP6P35125 1406 aa8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 PRKRIP1Q9H875 184 aaPredicted RBP8.35□□□□□ -1.07
AC009404.1-201ENST00000420330 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
AC009404.1-201ENST00000420330 NLRP13Q86W25 1043 aa8.34□□□□□ -1.07
AC009404.1-201ENST00000420330 FAM9BQ8IZU0 186 aa8.34□□□□□ -1.07
AC009404.1-201ENST00000420330 SLIT3O75094 1523 aa8.34□□□□□ -1.07
AC009404.1-201ENST00000420330 LMO7Q8WWI1 1683 aa8.34□□□□□ -1.07
AC009404.1-201ENST00000420330 CABP2Q9NPB3 220 aa8.34□□□□□ -1.07
AC009404.1-201ENST00000420330 ABTB2Q8N961 1025 aa8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 TONSLQ96HA7 1378 aa8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 SKAP1Q86WV1 359 aa8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 ARXQ96QS3 562 aa8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
AC009404.1-201ENST00000420330 AKAP12Q02952 1782 aa8.32□□□□□ -1.08
AC009404.1-201ENST00000420330 RGPD1P0DJD0 1748 aa8.32□□□□□ -1.08
AC009404.1-201ENST00000420330 SPATA31A1Q5TZJ5 1347 aa8.32□□□□□ -1.08
AC009404.1-201ENST00000420330 ZNF692Q9BU19 519 aaPredicted RBP8.32□□□□□ -1.08
AC009404.1-201ENST00000420330 ZRANB1Q9UGI0 708 aa8.32□□□□□ -1.08
AC009404.1-201ENST00000420330 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
AC009404.1-201ENST00000420330 TTC21AQ8NDW8 1320 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 A0A0G2JS52 829 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 PDCL3Q9H2J4 239 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 CABP1Q9NZU7 370 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 PIK3C2AO00443 1686 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 ABCC6O95255 1503 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 ZC3H6P61129 1189 aaKnown RBP8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 NUTM2GQ5VZR2 741 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
AC009404.1-201ENST00000420330 CAMTA1Q9Y6Y1 1673 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 DISP2A7MBM2 1401 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 CPSF1Q10570 1443 aaKnown RBP8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 MON2Q7Z3U7 1717 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 GCP02774 474 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 XRCC6P12956 609 aaKnown RBP eCLIP8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 GTF2E1P29083 439 aaPredicted RBP8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 PUS7Q96PZ0 661 aaKnown RBP8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 AATKQ6ZMQ8 1374 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 FSD2A1L4K1 749 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 EVA1CP58658 441 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 CARD11Q9BXL7 1154 aa8.3□□□□□ -1.08
AC009404.1-201ENST00000420330 BAG6P46379 1132 aa8.29□□□□□ -1.08
AC009404.1-201ENST00000420330 NLRP6P59044 892 aa8.29□□□□□ -1.08
AC009404.1-201ENST00000420330 KCNH5Q8NCM2 988 aa8.29□□□□□ -1.08
AC009404.1-201ENST00000420330 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
AC009404.1-201ENST00000420330 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
AC009404.1-201ENST00000420330 PANK2Q9BZ23 570 aa8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 PARP4Q9UKK3 1724 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms