RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
PHF3-203ENST00000420043 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
PHF3-203ENST00000420043 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
PHF3-203ENST00000420043 MON2Q7Z3U7 1717 aa13.65□□□□□ -0.22
PHF3-203ENST00000420043 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
PHF3-203ENST00000420043 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
PHF3-203ENST00000420043 USP6P35125 1406 aa13.64□□□□□ -0.23
PHF3-203ENST00000420043 UNC5CLQ8IV45 518 aa13.64□□□□□ -0.23
PHF3-203ENST00000420043 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
PHF3-203ENST00000420043 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
PHF3-203ENST00000420043 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
PHF3-203ENST00000420043 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
PHF3-203ENST00000420043 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
PHF3-203ENST00000420043 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
PHF3-203ENST00000420043 SUPT16HQ9Y5B9 1047 aaKnown RBP13.62□□□□□ -0.23
PHF3-203ENST00000420043 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
PHF3-203ENST00000420043 EP400Q96L91 3159 aa13.61□□□□□ -0.23
PHF3-203ENST00000420043 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
PHF3-203ENST00000420043 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
PHF3-203ENST00000420043 RUNDC1Q96C34 613 aa13.61□□□□□ -0.23
PHF3-203ENST00000420043 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
PHF3-203ENST00000420043 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
PHF3-203ENST00000420043 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
PHF3-203ENST00000420043 SLIT2O94813 1529 aa13.6□□□□□ -0.23
PHF3-203ENST00000420043 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
PHF3-203ENST00000420043 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
PHF3-203ENST00000420043 SBNO1A3KN83 1393 aa13.59□□□□□ -0.23
PHF3-203ENST00000420043 MARF1Q9Y4F3 1742 aaKnown RBP13.59□□□□□ -0.23
PHF3-203ENST00000420043 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
PHF3-203ENST00000420043 APAF1O14727 1248 aa13.59□□□□□ -0.23
PHF3-203ENST00000420043 FKBP8Q14318 412 aa13.59□□□□□ -0.23
PHF3-203ENST00000420043 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
PHF3-203ENST00000420043 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
PHF3-203ENST00000420043 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.23
PHF3-203ENST00000420043 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
PHF3-203ENST00000420043 CAPN15O75808 1086 aa13.57□□□□□ -0.24
PHF3-203ENST00000420043 NEFMP07197 916 aa13.57□□□□□ -0.24
PHF3-203ENST00000420043 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
PHF3-203ENST00000420043 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
PHF3-203ENST00000420043 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 VPS72Q15906 364 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 GLI3P10071 1580 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
PHF3-203ENST00000420043 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
PHF3-203ENST00000420043 FBLN1P23142 703 aa13.55□□□□□ -0.24
PHF3-203ENST00000420043 DSG3P32926 999 aa13.55□□□□□ -0.24
PHF3-203ENST00000420043 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
PHF3-203ENST00000420043 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
PHF3-203ENST00000420043 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
PHF3-203ENST00000420043 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
PHF3-203ENST00000420043 NLRP6P59044 892 aa13.54□□□□□ -0.24
PHF3-203ENST00000420043 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
PHF3-203ENST00000420043 A0A0G2JS52 829 aa13.53□□□□□ -0.24
PHF3-203ENST00000420043 SOX12O15370 315 aa13.53□□□□□ -0.24
PHF3-203ENST00000420043 MYT1Q01538 1121 aa13.53□□□□□ -0.24
PHF3-203ENST00000420043 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
PHF3-203ENST00000420043 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
PHF3-203ENST00000420043 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
PHF3-203ENST00000420043 NEUROD2Q15784 382 aa13.52□□□□□ -0.25
PHF3-203ENST00000420043 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
PHF3-203ENST00000420043 DEFB132Q7Z7B7 95 aa13.52□□□□□ -0.25
PHF3-203ENST00000420043 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
PHF3-203ENST00000420043 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
PHF3-203ENST00000420043 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
PHF3-203ENST00000420043 ZNF521Q96K83 1311 aa13.51□□□□□ -0.25
PHF3-203ENST00000420043 E9PSI1 815 aa13.51□□□□□ -0.25
PHF3-203ENST00000420043 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
PHF3-203ENST00000420043 FCHSD2O94868 740 aa13.51□□□□□ -0.25
PHF3-203ENST00000420043 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
PHF3-203ENST00000420043 RRP7AQ9Y3A4 280 aaKnown RBP13.51□□□□□ -0.25
PHF3-203ENST00000420043 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
PHF3-203ENST00000420043 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
PHF3-203ENST00000420043 IL13P35225 146 aa13.5□□□□□ -0.25
PHF3-203ENST00000420043 AMPHP49418 695 aa13.5□□□□□ -0.25
PHF3-203ENST00000420043 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
PHF3-203ENST00000420043 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
PHF3-203ENST00000420043 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
PHF3-203ENST00000420043 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
PHF3-203ENST00000420043 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
PHF3-203ENST00000420043 SLFN5Q08AF3 891 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 FAM182BQ5T319 152 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 ERICH6BQ5W0A0 696 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
PHF3-203ENST00000420043 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
PHF3-203ENST00000420043 ALS2Q96Q42 1657 aa13.48□□□□□ -0.25
PHF3-203ENST00000420043 WDR63Q8IWG1 891 aa13.48□□□□□ -0.25
PHF3-203ENST00000420043 PLEKHF1Q96S99 279 aa13.48□□□□□ -0.25
PHF3-203ENST00000420043 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
PHF3-203ENST00000420043 HMOX1P09601 288 aa13.47□□□□□ -0.25
PHF3-203ENST00000420043 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
PHF3-203ENST00000420043 TMPOP42166 694 aaKnown RBP13.47□□□□□ -0.25
PHF3-203ENST00000420043 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
PHF3-203ENST00000420043 DUSP27Q5VZP5 1158 aa13.47□□□□□ -0.25
PHF3-203ENST00000420043 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms