RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 RRS1Q15050 365 aaKnown RBP10.64□□□□□ -0.71
COL12A1-204ENST00000419671 RGPD1P0DJD0 1748 aa10.64□□□□□ -0.71
COL12A1-204ENST00000419671 STRCP1A6NGW2 1772 aa10.64□□□□□ -0.71
COL12A1-204ENST00000419671 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
COL12A1-204ENST00000419671 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
COL12A1-204ENST00000419671 ANP32EQ9BTT0 268 aa10.64□□□□□ -0.71
COL12A1-204ENST00000419671 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
COL12A1-204ENST00000419671 IL13P35225 146 aa10.63□□□□□ -0.71
COL12A1-204ENST00000419671 WDR63Q8IWG1 891 aa10.63□□□□□ -0.71
COL12A1-204ENST00000419671 TTC21AQ8NDW8 1320 aa10.62□□□□□ -0.71
COL12A1-204ENST00000419671 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
COL12A1-204ENST00000419671 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
COL12A1-204ENST00000419671 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
COL12A1-204ENST00000419671 FCHSD2O94868 740 aa10.62□□□□□ -0.71
COL12A1-204ENST00000419671 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
COL12A1-204ENST00000419671 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
COL12A1-204ENST00000419671 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
COL12A1-204ENST00000419671 LTN1O94822 1766 aa10.61□□□□□ -0.71
COL12A1-204ENST00000419671 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
COL12A1-204ENST00000419671 C20orf194Q5TEA3 1177 aa10.61□□□□□ -0.71
COL12A1-204ENST00000419671 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
COL12A1-204ENST00000419671 HMOX1P09601 288 aa10.6□□□□□ -0.71
COL12A1-204ENST00000419671 PNNQ9H307 717 aaKnown RBP10.6□□□□□ -0.71
COL12A1-204ENST00000419671 BCAR3O75815 825 aa10.59□□□□□ -0.71
COL12A1-204ENST00000419671 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
COL12A1-204ENST00000419671 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.72
COL12A1-204ENST00000419671 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
COL12A1-204ENST00000419671 RIPK4P57078 832 aa10.58□□□□□ -0.72
COL12A1-204ENST00000419671 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
COL12A1-204ENST00000419671 EIF4A2Q14240 407 aaKnown RBP10.57□□□□□ -0.72
COL12A1-204ENST00000419671 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
COL12A1-204ENST00000419671 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-204ENST00000419671 XIRP1Q702N8 1843 aaKnown RBP10.57□□□□□ -0.72
COL12A1-204ENST00000419671 MAP3K19Q56UN5 1328 aa10.57□□□□□ -0.72
COL12A1-204ENST00000419671 SOX12O15370 315 aa10.56□□□□□ -0.72
COL12A1-204ENST00000419671 HSP90AB2PQ58FF8 381 aa10.56□□□□□ -0.72
COL12A1-204ENST00000419671 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
COL12A1-204ENST00000419671 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
COL12A1-204ENST00000419671 MYH16Q9H6N6 1097 aa10.56□□□□□ -0.72
COL12A1-204ENST00000419671 IL16Q14005 1332 aa10.55□□□□□ -0.72
COL12A1-204ENST00000419671 KIF1AQ12756 1690 aa10.55□□□□□ -0.72
COL12A1-204ENST00000419671 SBNO1A3KN83 1393 aa10.55□□□□□ -0.72
COL12A1-204ENST00000419671 RARSP54136 660 aaKnown RBP10.55□□□□□ -0.72
COL12A1-204ENST00000419671 NFE2L2Q16236 605 aa10.55□□□□□ -0.72
COL12A1-204ENST00000419671 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-204ENST00000419671 TSR2Q969E8 191 aaKnown RBP10.55□□□□□ -0.72
COL12A1-204ENST00000419671 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
COL12A1-204ENST00000419671 FLT4P35916 1363 aa10.55□□□□□ -0.72
COL12A1-204ENST00000419671 NLRP6P59044 892 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 TPRNQ4KMQ1 711 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 NFAT5O94916 1531 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 RGPD2P0DJD1 1756 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 NUTM2GQ5VZR2 741 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 AEBP1Q8IUX7 1158 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 ABTB2Q8N961 1025 aa10.54□□□□□ -0.72
COL12A1-204ENST00000419671 LMTK3Q96Q04 1460 aa10.53□□□□□ -0.72
COL12A1-204ENST00000419671 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-204ENST00000419671 NEFMP07197 916 aa10.53□□□□□ -0.72
COL12A1-204ENST00000419671 C14orf37Q86TY3 774 aa10.53□□□□□ -0.72
COL12A1-204ENST00000419671 PROSER2Q86WR7 435 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-204ENST00000419671 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.72
COL12A1-204ENST00000419671 HSPA2P54652 639 aa10.52□□□□□ -0.72
COL12A1-204ENST00000419671 SULT6B1Q6IMI4 303 aa10.52□□□□□ -0.72
COL12A1-204ENST00000419671 ORAI2Q96SN7 254 aa10.52□□□□□ -0.72
COL12A1-204ENST00000419671 ALS2Q96Q42 1657 aa10.52□□□□□ -0.73
COL12A1-204ENST00000419671 EXOSC9Q06265 439 aaKnown RBP10.52□□□□□ -0.73
COL12A1-204ENST00000419671 ARHGEF10O15013 1369 aa10.51□□□□□ -0.73
COL12A1-204ENST00000419671 KIF24Q5T7B8 1368 aa10.51□□□□□ -0.73
COL12A1-204ENST00000419671 C1orf167Q5SNV9 1468 aa10.51□□□□□ -0.73
COL12A1-204ENST00000419671 THUMPD2Q9BTF0 503 aaKnown RBP10.51□□□□□ -0.73
COL12A1-204ENST00000419671 BCL2L13Q9BXK5 485 aa10.51□□□□□ -0.73
COL12A1-204ENST00000419671 RGPD5Q99666 1765 aa10.51□□□□□ -0.73
COL12A1-204ENST00000419671 KDRP35968 1356 aa10.51□□□□□ -0.73
COL12A1-204ENST00000419671 CT47B1P0C2W7 299 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-204ENST00000419671 AMPHP49418 695 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 PSME1Q06323 249 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 PDE3AQ14432 1141 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 C19orf44Q9H6X5 657 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-204ENST00000419671 SLIT3O75094 1523 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 FOXO3O43524 673 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 HOXC9P31274 260 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 IGSF1Q8N6C5 1336 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 MST1RQ04912 1400 aa10.5□□□□□ -0.73
COL12A1-204ENST00000419671 FAM83GA6ND36 823 aa10.49□□□□□ -0.73
COL12A1-204ENST00000419671 FRAT1Q92837 279 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-204ENST00000419671 VIRMAQ69YN4 1812 aaKnown RBP10.49□□□□□ -0.73
COL12A1-204ENST00000419671 DCCP43146 1447 aa10.49□□□□□ -0.73
COL12A1-204ENST00000419671 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 PAXIP1Q6ZW49 1069 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-204ENST00000419671 PANK1Q8TE04 598 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-204ENST00000419671 EYA1Q99502 592 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 TNNQ9UQP3 1299 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 RTL1A6NKG5 1358 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 NCOA3Q9Y6Q9 1424 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 XPCQ01831 940 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-204ENST00000419671 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms