RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 NAP1L5Q96NT1 182 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-203ENST00000419007 PPIP5K1Q6PFW1 1433 aa18.9■□□□□ 0.62
SEMA3B-203ENST00000419007 SNX21Q969T3 373 aa18.9■□□□□ 0.62
SEMA3B-203ENST00000419007 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
SEMA3B-203ENST00000419007 MBIPQ9NS73 344 aa18.9■□□□□ 0.62
SEMA3B-203ENST00000419007 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
SEMA3B-203ENST00000419007 CHMP4BQ9H444 224 aaKnown RBP18.89■□□□□ 0.62
SEMA3B-203ENST00000419007 GNAI1P63096 354 aa18.89■□□□□ 0.61
SEMA3B-203ENST00000419007 PTPRMP28827 1452 aa18.89■□□□□ 0.61
SEMA3B-203ENST00000419007 RICTORQ6R327 1708 aa18.89■□□□□ 0.61
SEMA3B-203ENST00000419007 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 APBB1O00213 710 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 CALD1Q05682 793 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 DCTN1Q14203 1278 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 SIRT2Q8IXJ6 389 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 PNPLA6Q8IY17 1366 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
SEMA3B-203ENST00000419007 ZNF428Q96B54 188 aa18.87■□□□□ 0.61
SEMA3B-203ENST00000419007 KIF2CQ99661 725 aa18.87■□□□□ 0.61
SEMA3B-203ENST00000419007 NME9Q86XW9 330 aa18.87■□□□□ 0.61
SEMA3B-203ENST00000419007 C8orf58Q8NAV2 365 aa18.87■□□□□ 0.61
SEMA3B-203ENST00000419007 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
SEMA3B-203ENST00000419007 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-203ENST00000419007 PIK3C2BO00750 1634 aa18.86■□□□□ 0.61
SEMA3B-203ENST00000419007 RRS1Q15050 365 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-203ENST00000419007 DDIT3P35638 169 aa18.85■□□□□ 0.61
SEMA3B-203ENST00000419007 ZFYVE9O95405 1425 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 TRIM44Q96DX7 344 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 CIZ1Q9ULV3 898 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 SSFA2P28290 1259 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 ARHGAP45Q92619 1136 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 CDC45O75419 566 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 GAS2L2Q8NHY3 880 aa18.84■□□□□ 0.61
SEMA3B-203ENST00000419007 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.61
SEMA3B-203ENST00000419007 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.6
SEMA3B-203ENST00000419007 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.6
SEMA3B-203ENST00000419007 MED14O60244 1454 aa18.83■□□□□ 0.6
SEMA3B-203ENST00000419007 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
SEMA3B-203ENST00000419007 BRPF1P55201 1214 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-203ENST00000419007 C16orf71Q8IYS4 520 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-203ENST00000419007 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
SEMA3B-203ENST00000419007 GOLGA6L22H0YM25 854 aa18.81■□□□□ 0.6
SEMA3B-203ENST00000419007 IL13P35225 146 aa18.81■□□□□ 0.6
SEMA3B-203ENST00000419007 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-203ENST00000419007 ABCC4O15439 1325 aa18.8■□□□□ 0.6
SEMA3B-203ENST00000419007 GSPT1P15170 499 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-203ENST00000419007 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
SEMA3B-203ENST00000419007 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-203ENST00000419007 ARHGAP31Q2M1Z3 1444 aa18.8■□□□□ 0.6
SEMA3B-203ENST00000419007 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
SEMA3B-203ENST00000419007 CLCN1P35523 988 aa18.79■□□□□ 0.6
SEMA3B-203ENST00000419007 SKOR2Q2VWA4 1001 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-203ENST00000419007 COG3Q96JB2 828 aa18.79■□□□□ 0.6
SEMA3B-203ENST00000419007 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
SEMA3B-203ENST00000419007 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-203ENST00000419007 ARHGEF40Q8TER5 1519 aa18.78■□□□□ 0.6
SEMA3B-203ENST00000419007 PLEKHM2Q8IWE5 1019 aa18.78■□□□□ 0.6
SEMA3B-203ENST00000419007 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
SEMA3B-203ENST00000419007 ESPNB1AK53 854 aa18.78■□□□□ 0.6
SEMA3B-203ENST00000419007 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
SEMA3B-203ENST00000419007 OTUD7AQ8TE49 926 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-203ENST00000419007 ANKRD26Q9UPS8 1709 aa18.77■□□□□ 0.6
SEMA3B-203ENST00000419007 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
SEMA3B-203ENST00000419007 SMARCA5O60264 1052 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-203ENST00000419007 SOX12O15370 315 aa18.76■□□□□ 0.59
SEMA3B-203ENST00000419007 ISY1Q9ULR0 285 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-203ENST00000419007 ALKQ9UM73 1620 aa18.76■□□□□ 0.59
SEMA3B-203ENST00000419007 MAP2P11137 1827 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-203ENST00000419007 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
SEMA3B-203ENST00000419007 ERBB4Q15303 1308 aa18.75■□□□□ 0.59
SEMA3B-203ENST00000419007 MCTP1Q6DN14 999 aa18.75■□□□□ 0.59
SEMA3B-203ENST00000419007 AEBP1Q8IUX7 1158 aa18.75■□□□□ 0.59
SEMA3B-203ENST00000419007 TMEM131LA2VDJ0 1609 aa18.74■□□□□ 0.59
SEMA3B-203ENST00000419007 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
SEMA3B-203ENST00000419007 KIF20BQ96Q89 1820 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 WASLO00401 505 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 BAG4O95429 457 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 PTMSP20962 102 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 MCM10Q7L590 875 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 DCTPP1Q9H773 170 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 RABEP1Q15276 862 aa18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 NUDT16Q96DE0 195 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-203ENST00000419007 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
SEMA3B-203ENST00000419007 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
SEMA3B-203ENST00000419007 ANP32BQ92688 251 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-203ENST00000419007 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-203ENST00000419007 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
SEMA3B-203ENST00000419007 CASC1Q6TDU7 716 aa18.71■□□□□ 0.59
SEMA3B-203ENST00000419007 SLC4A10Q6U841 1118 aa18.71■□□□□ 0.59
SEMA3B-203ENST00000419007 PKP1Q13835 747 aa18.7■□□□□ 0.58
SEMA3B-203ENST00000419007 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
SEMA3B-203ENST00000419007 SDSP20132 328 aa18.7■□□□□ 0.58
SEMA3B-203ENST00000419007 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
SEMA3B-203ENST00000419007 CLTCQ00610 1675 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms