RNA–Protein interactions for RNA: ENST00000418790.5

TRAK1-204, Transcript of trafficking kinesin protein 1, humanhuman

TSL 4

Gene TRAK1, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-204ENST00000418790 RIPK4P57078 832 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 PSME1Q06323 249 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 NFE2L2Q16236 605 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 NFAT5O94916 1531 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
TRAK1-204ENST00000418790 SOX12O15370 315 aa13.57□□□□□ -0.24
TRAK1-204ENST00000418790 SLIT3O75094 1523 aa13.56□□□□□ -0.24
TRAK1-204ENST00000418790 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
TRAK1-204ENST00000418790 ATF3P18847 181 aa13.56□□□□□ -0.24
TRAK1-204ENST00000418790 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
TRAK1-204ENST00000418790 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
TRAK1-204ENST00000418790 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
TRAK1-204ENST00000418790 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
TRAK1-204ENST00000418790 PLIN1O60240 522 aa13.55□□□□□ -0.24
TRAK1-204ENST00000418790 AMPHP49418 695 aa13.55□□□□□ -0.24
TRAK1-204ENST00000418790 MSH6P52701 1360 aa13.55□□□□□ -0.24
TRAK1-204ENST00000418790 LTN1O94822 1766 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 FOXO3O43524 673 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 HOXC9P31274 260 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 B4GALNT3Q6L9W6 998 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 EXOC6Q8TAG9 804 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
TRAK1-204ENST00000418790 DLG5Q8TDM6 1919 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
TRAK1-204ENST00000418790 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 KDRP35968 1356 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
TRAK1-204ENST00000418790 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
TRAK1-204ENST00000418790 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
TRAK1-204ENST00000418790 CRBNQ96SW2 442 aa13.52□□□□□ -0.25
TRAK1-204ENST00000418790 USP19O94966 1318 aa13.52□□□□□ -0.25
TRAK1-204ENST00000418790 BCAR3O75815 825 aa13.51□□□□□ -0.25
TRAK1-204ENST00000418790 RARSP54136 660 aaKnown RBP13.51□□□□□ -0.25
TRAK1-204ENST00000418790 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-204ENST00000418790 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
TRAK1-204ENST00000418790 IP6K1Q92551 441 aa13.5□□□□□ -0.25
TRAK1-204ENST00000418790 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
TRAK1-204ENST00000418790 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
TRAK1-204ENST00000418790 EYA1Q99502 592 aa13.5□□□□□ -0.25
TRAK1-204ENST00000418790 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
TRAK1-204ENST00000418790 ZNF335Q9H4Z2 1342 aaPredicted RBP13.48□□□□□ -0.25
TRAK1-204ENST00000418790 EXOSC9Q06265 439 aaKnown RBP13.48□□□□□ -0.25
TRAK1-204ENST00000418790 IFT57Q9NWB7 429 aa13.48□□□□□ -0.25
TRAK1-204ENST00000418790 PXDNQ92626 1479 aa13.48□□□□□ -0.25
TRAK1-204ENST00000418790 GCP02774 474 aa13.47□□□□□ -0.25
TRAK1-204ENST00000418790 ZNF853P0CG23 659 aa13.47□□□□□ -0.25
TRAK1-204ENST00000418790 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
TRAK1-204ENST00000418790 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
TRAK1-204ENST00000418790 MED1Q15648 1581 aaPredicted RBP13.46□□□□□ -0.25
TRAK1-204ENST00000418790 GNAI1P63096 354 aa13.46□□□□□ -0.25
TRAK1-204ENST00000418790 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
TRAK1-204ENST00000418790 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.26
TRAK1-204ENST00000418790 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
TRAK1-204ENST00000418790 CANXP27824 592 aaKnown RBP13.44□□□□□ -0.26
TRAK1-204ENST00000418790 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
TRAK1-204ENST00000418790 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
TRAK1-204ENST00000418790 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
TRAK1-204ENST00000418790 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
TRAK1-204ENST00000418790 NCAPD2Q15021 1401 aa13.43□□□□□ -0.26
TRAK1-204ENST00000418790 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
TRAK1-204ENST00000418790 DDX17Q92841 729 aaKnown RBP13.43□□□□□ -0.26
TRAK1-204ENST00000418790 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
TRAK1-204ENST00000418790 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
TRAK1-204ENST00000418790 LAS1LQ9Y4W2 734 aaKnown RBP13.43□□□□□ -0.26
TRAK1-204ENST00000418790 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 CRB1P82279 1406 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 MBIPQ9NS73 344 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 ABCC6O95255 1503 aa13.42□□□□□ -0.26
TRAK1-204ENST00000418790 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
TRAK1-204ENST00000418790 HTATSF1O43719 755 aaKnown RBP13.41□□□□□ -0.26
TRAK1-204ENST00000418790 ALDH1L2Q3SY69 923 aa13.41□□□□□ -0.26
TRAK1-204ENST00000418790 SSH1Q8WYL5 1049 aa13.41□□□□□ -0.26
TRAK1-204ENST00000418790 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
TRAK1-204ENST00000418790 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
TRAK1-204ENST00000418790 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
TRAK1-204ENST00000418790 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
TRAK1-204ENST00000418790 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
TRAK1-204ENST00000418790 ZBTB7CA1YPR0 619 aa13.4□□□□□ -0.26
TRAK1-204ENST00000418790 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
TRAK1-204ENST00000418790 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
TRAK1-204ENST00000418790 CHL1O00533 1208 aa13.39□□□□□ -0.27
TRAK1-204ENST00000418790 VAMP4O75379 141 aa13.39□□□□□ -0.27
TRAK1-204ENST00000418790 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
TRAK1-204ENST00000418790 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
TRAK1-204ENST00000418790 MCM10Q7L590 875 aa13.39□□□□□ -0.27
TRAK1-204ENST00000418790 PANK1Q8TE04 598 aa13.39□□□□□ -0.27
TRAK1-204ENST00000418790 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
TRAK1-204ENST00000418790 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
TRAK1-204ENST00000418790 SLAIN2Q9P270 581 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms