RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 RTL1A6NKG5 1358 aa11.76□□□□□ -0.53
LINCMD1-201ENST00000418518 KDRP35968 1356 aa11.76□□□□□ -0.53
LINCMD1-201ENST00000418518 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
LINCMD1-201ENST00000418518 RIPK4P57078 832 aa11.75□□□□□ -0.53
LINCMD1-201ENST00000418518 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
LINCMD1-201ENST00000418518 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
LINCMD1-201ENST00000418518 PPM1GO15355 546 aaPredicted RBP11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 BCAR3O75815 825 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 NEFMP07197 916 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 AAMPQ13685 434 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 KDM2BQ8NHM5 1336 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
LINCMD1-201ENST00000418518 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
LINCMD1-201ENST00000418518 LMOD3Q0VAK6 560 aa11.73□□□□□ -0.53
LINCMD1-201ENST00000418518 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
LINCMD1-201ENST00000418518 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
LINCMD1-201ENST00000418518 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
LINCMD1-201ENST00000418518 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
LINCMD1-201ENST00000418518 HMOX1P09601 288 aa11.71□□□□□ -0.53
LINCMD1-201ENST00000418518 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
LINCMD1-201ENST00000418518 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
LINCMD1-201ENST00000418518 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
LINCMD1-201ENST00000418518 CRYBG1Q9Y4K1 1723 aa11.71□□□□□ -0.54
LINCMD1-201ENST00000418518 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
LINCMD1-201ENST00000418518 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
LINCMD1-201ENST00000418518 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
LINCMD1-201ENST00000418518 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
LINCMD1-201ENST00000418518 CACNA1FO60840 1977 aa11.7□□□□□ -0.54
LINCMD1-201ENST00000418518 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 NLRP6P59044 892 aa11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 CENPQQ7L2Z9 268 aaPredicted RBP11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
LINCMD1-201ENST00000418518 GNAI1P63096 354 aa11.68□□□□□ -0.54
LINCMD1-201ENST00000418518 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
LINCMD1-201ENST00000418518 USP19O94966 1318 aa11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 ABCC6O95255 1503 aa11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 MS4A1P11836 297 aa11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 HOXC9P31274 260 aa11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 LMO7Q8WWI1 1683 aa11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
LINCMD1-201ENST00000418518 KIF16BQ96L93 1317 aa11.66□□□□□ -0.54
LINCMD1-201ENST00000418518 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
LINCMD1-201ENST00000418518 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
LINCMD1-201ENST00000418518 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
LINCMD1-201ENST00000418518 C19orf44Q9H6X5 657 aa11.66□□□□□ -0.54
LINCMD1-201ENST00000418518 COL18A1P39060 1754 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 RGPD5Q99666 1765 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 ZKSCAN2Q63HK3 967 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 PANK1Q8TE04 598 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 CLUAP1Q96AJ1 413 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 CRB1P82279 1406 aa11.65□□□□□ -0.54
LINCMD1-201ENST00000418518 RLBP1P12271 317 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 AMPHP49418 695 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 ESCO1Q5FWF5 840 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 KCNH5Q8NCM2 988 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 EYA1Q99502 592 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 TMEM94Q12767 1356 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
LINCMD1-201ENST00000418518 ADAMTS7Q9UKP4 1686 aa11.63□□□□□ -0.55
LINCMD1-201ENST00000418518 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
LINCMD1-201ENST00000418518 IP6K1Q92551 441 aa11.63□□□□□ -0.55
LINCMD1-201ENST00000418518 MBIPQ9NS73 344 aa11.63□□□□□ -0.55
LINCMD1-201ENST00000418518 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
LINCMD1-201ENST00000418518 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
LINCMD1-201ENST00000418518 VAMP4O75379 141 aa11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 PSME1Q06323 249 aa11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 MVPQ14764 893 aaKnown RBP11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 DZIP1LQ8IYY4 767 aaKnown RBP11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 GAS2L2Q8NHY3 880 aa11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 FRAT1Q92837 279 aaPredicted RBP11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 RBM33Q96EV2 1170 aaKnown RBP11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 MSH6P52701 1360 aa11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 PXDNQ92626 1479 aa11.62□□□□□ -0.55
LINCMD1-201ENST00000418518 CHL1O00533 1208 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 TRIM27P14373 513 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 ARHGAP45Q92619 1136 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 BCL2L13Q9BXK5 485 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 TNNQ9UQP3 1299 aa11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 SIPA1L3O60292 1781 aaPredicted RBP11.61□□□□□ -0.55
LINCMD1-201ENST00000418518 FAM83GA6ND36 823 aa11.6□□□□□ -0.55
LINCMD1-201ENST00000418518 SOX12O15370 315 aa11.6□□□□□ -0.55
LINCMD1-201ENST00000418518 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms