RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 SKOR2Q2VWA4 1001 aaPredicted RBP16■□□□□ 0.15
BDNF-208ENST00000418212 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
BDNF-208ENST00000418212 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
BDNF-208ENST00000418212 DHX16O60231 1041 aaKnown RBP16■□□□□ 0.15
BDNF-208ENST00000418212 NUCB2P80303 420 aa16■□□□□ 0.15
BDNF-208ENST00000418212 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
BDNF-208ENST00000418212 CCT4P50991 539 aaKnown RBP15.99■□□□□ 0.15
BDNF-208ENST00000418212 GOLGA6L19H0YKK7 550 aa15.99■□□□□ 0.15
BDNF-208ENST00000418212 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
BDNF-208ENST00000418212 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
BDNF-208ENST00000418212 LRRCC1Q9C099 1032 aa15.98■□□□□ 0.15
BDNF-208ENST00000418212 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
BDNF-208ENST00000418212 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
BDNF-208ENST00000418212 GNAT3A8MTJ3 354 aa15.97■□□□□ 0.15
BDNF-208ENST00000418212 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
BDNF-208ENST00000418212 TRIM29Q14134 588 aa15.97■□□□□ 0.15
BDNF-208ENST00000418212 POGZQ7Z3K3 1410 aa15.97■□□□□ 0.15
BDNF-208ENST00000418212 PIP4K2BP78356 416 aa15.96■□□□□ 0.15
BDNF-208ENST00000418212 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
BDNF-208ENST00000418212 NOL10Q9BSC4 688 aaKnown RBP15.96■□□□□ 0.15
BDNF-208ENST00000418212 ATP2B1P20020 1258 aa15.96■□□□□ 0.14
BDNF-208ENST00000418212 SMARCA5O60264 1052 aaPredicted RBP15.95■□□□□ 0.14
BDNF-208ENST00000418212 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
BDNF-208ENST00000418212 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
BDNF-208ENST00000418212 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
BDNF-208ENST00000418212 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
BDNF-208ENST00000418212 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
BDNF-208ENST00000418212 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
BDNF-208ENST00000418212 CNNM1Q9NRU3 951 aa15.94■□□□□ 0.14
BDNF-208ENST00000418212 TRIM27P14373 513 aa15.94■□□□□ 0.14
BDNF-208ENST00000418212 SCAF11Q99590 1463 aaKnown RBP15.93■□□□□ 0.14
BDNF-208ENST00000418212 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
BDNF-208ENST00000418212 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
BDNF-208ENST00000418212 TRAPPC8Q9Y2L5 1435 aa15.93■□□□□ 0.14
BDNF-208ENST00000418212 TRAK2O60296 914 aa15.92■□□□□ 0.14
BDNF-208ENST00000418212 ANXA1P04083 346 aa15.92■□□□□ 0.14
BDNF-208ENST00000418212 TPD52L1Q16890 204 aaPredicted RBP15.92■□□□□ 0.14
BDNF-208ENST00000418212 RRP12Q5JTH9 1297 aaKnown RBP15.92■□□□□ 0.14
BDNF-208ENST00000418212 AACSQ86V21 672 aa15.92■□□□□ 0.14
BDNF-208ENST00000418212 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
BDNF-208ENST00000418212 ACEP12821 1306 aa15.92■□□□□ 0.14
BDNF-208ENST00000418212 FIBPO43427 364 aa15.92■□□□□ 0.14
BDNF-208ENST00000418212 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
BDNF-208ENST00000418212 CWC27Q6UX04 472 aaKnown RBP15.92■□□□□ 0.14
BDNF-208ENST00000418212 ERICH2A1L162 156 aa15.91■□□□□ 0.14
BDNF-208ENST00000418212 STK3Q13188 491 aa15.91■□□□□ 0.14
BDNF-208ENST00000418212 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
BDNF-208ENST00000418212 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
BDNF-208ENST00000418212 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
BDNF-208ENST00000418212 PRPF40AO75400 957 aaKnown RBP15.91■□□□□ 0.14
BDNF-208ENST00000418212 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
BDNF-208ENST00000418212 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
BDNF-208ENST00000418212 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
BDNF-208ENST00000418212 TESK2Q96S53 571 aa15.91■□□□□ 0.14
BDNF-208ENST00000418212 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
BDNF-208ENST00000418212 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
BDNF-208ENST00000418212 RABEP1Q15276 862 aa15.9■□□□□ 0.14
BDNF-208ENST00000418212 UPF3BQ9BZI7 483 aaKnown RBP15.9■□□□□ 0.14
BDNF-208ENST00000418212 PLCH2O75038 1416 aa15.9■□□□□ 0.14
BDNF-208ENST00000418212 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
BDNF-208ENST00000418212 ASXL2Q76L83 1435 aa15.89■□□□□ 0.13
BDNF-208ENST00000418212 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
BDNF-208ENST00000418212 CHRNA2Q15822 529 aa15.89■□□□□ 0.13
BDNF-208ENST00000418212 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
BDNF-208ENST00000418212 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
BDNF-208ENST00000418212 RRP9O43818 475 aaKnown RBP15.88■□□□□ 0.13
BDNF-208ENST00000418212 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 ERC1Q8IUD2 1116 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 IFT57Q9NWB7 429 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 PSMA5P28066 241 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
BDNF-208ENST00000418212 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
BDNF-208ENST00000418212 CEP126Q9P2H0 1117 aa15.87■□□□□ 0.13
BDNF-208ENST00000418212 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.87■□□□□ 0.13
BDNF-208ENST00000418212 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
BDNF-208ENST00000418212 CCDC73Q6ZRK6 1079 aa15.87■□□□□ 0.13
BDNF-208ENST00000418212 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
BDNF-208ENST00000418212 MPHOSPH8Q99549 860 aa15.87■□□□□ 0.13
BDNF-208ENST00000418212 SYCP2Q9BX26 1530 aa15.86■□□□□ 0.13
BDNF-208ENST00000418212 ZNF592Q92610 1267 aa15.86■□□□□ 0.13
BDNF-208ENST00000418212 CCDC158Q5M9N0 1113 aa15.86■□□□□ 0.13
BDNF-208ENST00000418212 MPNDQ8N594 471 aa15.86■□□□□ 0.13
BDNF-208ENST00000418212 SAFBQ15424 915 aaKnown RBP eCLIP15.86■□□□□ 0.13
BDNF-208ENST00000418212 CCAR2Q8N163 923 aaKnown RBP15.86■□□□□ 0.13
BDNF-208ENST00000418212 NKTRP30414 1462 aaKnown RBP15.85■□□□□ 0.13
BDNF-208ENST00000418212 IGHDP01880 384 aa15.85■□□□□ 0.13
BDNF-208ENST00000418212 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
BDNF-208ENST00000418212 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
BDNF-208ENST00000418212 MBIPQ9NS73 344 aa15.85■□□□□ 0.13
BDNF-208ENST00000418212 TTC39AQ5SRH9 613 aa15.84■□□□□ 0.13
BDNF-208ENST00000418212 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
BDNF-208ENST00000418212 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
BDNF-208ENST00000418212 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
BDNF-208ENST00000418212 SASS6Q6UVJ0 657 aa15.84■□□□□ 0.13
BDNF-208ENST00000418212 RAPGEF6Q8TEU7 1601 aa15.84■□□□□ 0.13
BDNF-208ENST00000418212 FLIIQ13045 1269 aa15.83■□□□□ 0.13
BDNF-208ENST00000418212 TSHZ3Q63HK5 1081 aa15.83■□□□□ 0.13
BDNF-208ENST00000418212 BOLA2Q9H3K6 86 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms