RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 ZNF428Q96B54 188 aa25.7■■□□□ 1.7
KRT3-201ENST00000417996 NUDT16Q96DE0 195 aaKnown RBP25.7■■□□□ 1.7
KRT3-201ENST00000417996 CALD1Q05682 793 aaKnown RBP25.69■■□□□ 1.7
KRT3-201ENST00000417996 MBIPQ9NS73 344 aa25.69■■□□□ 1.7
KRT3-201ENST00000417996 GNAI1P63096 354 aa25.69■■□□□ 1.7
KRT3-201ENST00000417996 NRXN3Q9Y4C0 1643 aa25.68■■□□□ 1.7
KRT3-201ENST00000417996 BRPF1P55201 1214 aaPredicted RBP25.68■■□□□ 1.7
KRT3-201ENST00000417996 COG3Q96JB2 828 aa25.68■■□□□ 1.7
KRT3-201ENST00000417996 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
KRT3-201ENST00000417996 IFT57Q9NWB7 429 aa25.68■■□□□ 1.7
KRT3-201ENST00000417996 CDK12Q9NYV4 1490 aaPredicted RBP25.67■■□□□ 1.7
KRT3-201ENST00000417996 CHD1LQ86WJ1 897 aa25.66■■□□□ 1.7
KRT3-201ENST00000417996 ZBTB7BO15156 539 aaPredicted RBP25.66■■□□□ 1.7
KRT3-201ENST00000417996 CPS1P31327 1500 aa25.65■■□□□ 1.7
KRT3-201ENST00000417996 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.65■■□□□ 1.7
KRT3-201ENST00000417996 FAM83GA6ND36 823 aa25.64■■□□□ 1.69
KRT3-201ENST00000417996 ZNF853P0CG23 659 aa25.64■■□□□ 1.69
KRT3-201ENST00000417996 CCDC61Q9Y6R9 512 aa25.64■■□□□ 1.69
KRT3-201ENST00000417996 AATKQ6ZMQ8 1374 aa25.63■■□□□ 1.69
KRT3-201ENST00000417996 TWISTNBQ3B726 338 aaPredicted RBP25.63■■□□□ 1.69
KRT3-201ENST00000417996 ARHGAP45Q92619 1136 aa25.63■■□□□ 1.69
KRT3-201ENST00000417996 ANKRD45Q5TZF3 282 aa25.62■■□□□ 1.69
KRT3-201ENST00000417996 C8orf58Q8NAV2 365 aa25.62■■□□□ 1.69
KRT3-201ENST00000417996 ESF1Q9H501 851 aaKnown RBP25.62■■□□□ 1.69
KRT3-201ENST00000417996 PTCH1Q13635 1447 aa25.62■■□□□ 1.69
KRT3-201ENST00000417996 DCTN1Q14203 1278 aa25.62■■□□□ 1.69
KRT3-201ENST00000417996 LMOD3Q0VAK6 560 aa25.6■■□□□ 1.69
KRT3-201ENST00000417996 CFAP44Q96MT7 982 aa25.6■■□□□ 1.69
KRT3-201ENST00000417996 DLG5Q8TDM6 1919 aa25.59■■□□□ 1.69
KRT3-201ENST00000417996 PIK3R4Q99570 1358 aa25.59■■□□□ 1.69
KRT3-201ENST00000417996 CHMP4BQ9H444 224 aaKnown RBP25.59■■□□□ 1.69
KRT3-201ENST00000417996 ABCC4O15439 1325 aa25.58■■□□□ 1.69
KRT3-201ENST00000417996 MON2Q7Z3U7 1717 aa25.58■■□□□ 1.68
KRT3-201ENST00000417996 PRR36Q9H6K5 1346 aa25.57■■□□□ 1.68
KRT3-201ENST00000417996 GCC1Q96CN9 775 aa25.57■■□□□ 1.68
KRT3-201ENST00000417996 HSCBQ8IWL3 235 aa25.56■■□□□ 1.68
KRT3-201ENST00000417996 SIRT2Q8IXJ6 389 aa25.56■■□□□ 1.68
KRT3-201ENST00000417996 BMP2KLQ5H9B9 411 aa25.54■■□□□ 1.68
KRT3-201ENST00000417996 AEBP1Q8IUX7 1158 aa25.54■■□□□ 1.68
KRT3-201ENST00000417996 C3P01024 1663 aa25.54■■□□□ 1.68
KRT3-201ENST00000417996 ITSN1Q15811 1721 aa25.54■■□□□ 1.68
KRT3-201ENST00000417996 HDGFP51858 240 aaKnown RBP25.53■■□□□ 1.68
KRT3-201ENST00000417996 ZNF692Q9BU19 519 aaPredicted RBP25.53■■□□□ 1.68
KRT3-201ENST00000417996 KNDC1Q76NI1 1749 aa25.53■■□□□ 1.68
KRT3-201ENST00000417996 CHMP5Q9NZZ3 219 aa25.53■■□□□ 1.68
KRT3-201ENST00000417996 AKAP12Q02952 1782 aa25.53■■□□□ 1.68
KRT3-201ENST00000417996 TECPR2O15040 1411 aa25.52■■□□□ 1.68
KRT3-201ENST00000417996 NUTM2FA1L443 756 aa25.52■■□□□ 1.68
KRT3-201ENST00000417996 RBM25P49756 843 aaKnown RBP25.52■■□□□ 1.68
KRT3-201ENST00000417996 SIRT1Q96EB6 747 aa25.52■■□□□ 1.68
KRT3-201ENST00000417996 API5Q9BZZ5 524 aaKnown RBP25.52■■□□□ 1.68
KRT3-201ENST00000417996 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
KRT3-201ENST00000417996 ROBO2Q9HCK4 1378 aa25.51■■□□□ 1.67
KRT3-201ENST00000417996 EIF4A2Q14240 407 aaKnown RBP25.51■■□□□ 1.67
KRT3-201ENST00000417996 MCM4P33991 863 aa25.49■■□□□ 1.67
KRT3-201ENST00000417996 KRT24Q2M2I5 525 aa25.48■■□□□ 1.67
KRT3-201ENST00000417996 TNRQ92752 1358 aa25.48■■□□□ 1.67
KRT3-201ENST00000417996 TTC21BQ7Z4L5 1316 aa25.47■■□□□ 1.67
KRT3-201ENST00000417996 MCM10Q7L590 875 aa25.46■■□□□ 1.67
KRT3-201ENST00000417996 ACEP12821 1306 aa25.46■■□□□ 1.67
KRT3-201ENST00000417996 SOX12O15370 315 aa25.46■■□□□ 1.67
KRT3-201ENST00000417996 TBC1D9Q6ZT07 1266 aa25.46■■□□□ 1.67
KRT3-201ENST00000417996 TMEM2Q9UHN6 1383 aa25.45■■□□□ 1.66
KRT3-201ENST00000417996 NRKQ7Z2Y5 1582 aa25.44■■□□□ 1.66
KRT3-201ENST00000417996 SNX21Q969T3 373 aa25.43■■□□□ 1.66
KRT3-201ENST00000417996 HSP90AB2PQ58FF8 381 aa25.43■■□□□ 1.66
KRT3-201ENST00000417996 ARXQ96QS3 562 aa25.43■■□□□ 1.66
KRT3-201ENST00000417996 GZF1Q9H116 711 aaPredicted RBP25.43■■□□□ 1.66
KRT3-201ENST00000417996 KIF2CQ99661 725 aa25.42■■□□□ 1.66
KRT3-201ENST00000417996 HSP90AB1P08238 724 aaKnown RBP25.41■■□□□ 1.66
KRT3-201ENST00000417996 ADAMTS13Q76LX8 1427 aa25.41■■□□□ 1.66
KRT3-201ENST00000417996 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.41■■□□□ 1.66
KRT3-201ENST00000417996 NCOA3Q9Y6Q9 1424 aa25.4■■□□□ 1.66
KRT3-201ENST00000417996 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
KRT3-201ENST00000417996 CHL1O00533 1208 aa25.4■■□□□ 1.66
KRT3-201ENST00000417996 INTS3Q68E01 1043 aaKnown RBP25.39■■□□□ 1.66
KRT3-201ENST00000417996 OVOS2A0A0J9YW53 1432 aa25.39■■□□□ 1.65
KRT3-201ENST00000417996 OVOS2Q6IE36 1432 aa25.39■■□□□ 1.65
KRT3-201ENST00000417996 L1TD1Q5T7N2 865 aaKnown RBP25.38■■□□□ 1.65
KRT3-201ENST00000417996 KIF24Q5T7B8 1368 aa25.38■■□□□ 1.65
KRT3-201ENST00000417996 GSPT1P15170 499 aaKnown RBP25.38■■□□□ 1.65
KRT3-201ENST00000417996 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 LTKP29376 864 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 DDIT3P35638 169 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 PLEKHM2Q8IWE5 1019 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 DCTPP1Q9H773 170 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 PLEKHG3A1L390 1219 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 TRAK2O60296 914 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 CDC45O75419 566 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 CD2BP2O95400 341 aaKnown RBP25.37■■□□□ 1.65
KRT3-201ENST00000417996 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 USP6P35125 1406 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 PEAK1Q9H792 1746 aa25.37■■□□□ 1.65
KRT3-201ENST00000417996 RBM42Q9BTD8 480 aaKnown RBP25.36■■□□□ 1.65
KRT3-201ENST00000417996 RGS12O14924 1447 aa25.36■■□□□ 1.65
KRT3-201ENST00000417996 C16orf71Q8IYS4 520 aaPredicted RBP25.36■■□□□ 1.65
KRT3-201ENST00000417996 FOXD4L1Q9NU39 408 aa25.36■■□□□ 1.65
KRT3-201ENST00000417996 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
KRT3-201ENST00000417996 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
KRT3-201ENST00000417996 TOPAZ1Q8N9V7 1692 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms