RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
LINC00494-201ENST00000416742 KIF16BQ96L93 1317 aa12.66□□□□□ -0.38
LINC00494-201ENST00000416742 SEC24BO95487 1268 aa12.66□□□□□ -0.38
LINC00494-201ENST00000416742 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
LINC00494-201ENST00000416742 AEBP1Q8IUX7 1158 aa12.65□□□□□ -0.38
LINC00494-201ENST00000416742 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
LINC00494-201ENST00000416742 PLEKHG1Q9ULL1 1385 aa12.65□□□□□ -0.38
LINC00494-201ENST00000416742 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.39
LINC00494-201ENST00000416742 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.39
LINC00494-201ENST00000416742 MBIPQ9NS73 344 aa12.65□□□□□ -0.39
LINC00494-201ENST00000416742 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
LINC00494-201ENST00000416742 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
LINC00494-201ENST00000416742 VAMP4O75379 141 aa12.64□□□□□ -0.39
LINC00494-201ENST00000416742 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
LINC00494-201ENST00000416742 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
LINC00494-201ENST00000416742 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
LINC00494-201ENST00000416742 HSP90AB2PQ58FF8 381 aa12.63□□□□□ -0.39
LINC00494-201ENST00000416742 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
LINC00494-201ENST00000416742 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
LINC00494-201ENST00000416742 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
LINC00494-201ENST00000416742 CDK12Q9NYV4 1490 aaPredicted RBP12.63□□□□□ -0.39
LINC00494-201ENST00000416742 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
LINC00494-201ENST00000416742 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
LINC00494-201ENST00000416742 C8orf58Q8NAV2 365 aa12.62□□□□□ -0.39
LINC00494-201ENST00000416742 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
LINC00494-201ENST00000416742 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
LINC00494-201ENST00000416742 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
LINC00494-201ENST00000416742 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
LINC00494-201ENST00000416742 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
LINC00494-201ENST00000416742 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
LINC00494-201ENST00000416742 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
LINC00494-201ENST00000416742 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
LINC00494-201ENST00000416742 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
LINC00494-201ENST00000416742 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
LINC00494-201ENST00000416742 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
LINC00494-201ENST00000416742 MCM10Q7L590 875 aa12.59□□□□□ -0.39
LINC00494-201ENST00000416742 BCL11AQ9H165 835 aa12.59□□□□□ -0.39
LINC00494-201ENST00000416742 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
LINC00494-201ENST00000416742 USP19O94966 1318 aa12.59□□□□□ -0.39
LINC00494-201ENST00000416742 ITSN1Q15811 1721 aa12.58□□□□□ -0.39
LINC00494-201ENST00000416742 AMPHP49418 695 aa12.58□□□□□ -0.4
LINC00494-201ENST00000416742 USP6P35125 1406 aa12.58□□□□□ -0.4
LINC00494-201ENST00000416742 MON2Q7Z3U7 1717 aa12.58□□□□□ -0.4
LINC00494-201ENST00000416742 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
LINC00494-201ENST00000416742 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
LINC00494-201ENST00000416742 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
LINC00494-201ENST00000416742 NLRP6P59044 892 aa12.57□□□□□ -0.4
LINC00494-201ENST00000416742 KCNA6P17658 529 aa12.57□□□□□ -0.4
LINC00494-201ENST00000416742 RBM33Q96EV2 1170 aaKnown RBP12.57□□□□□ -0.4
LINC00494-201ENST00000416742 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
LINC00494-201ENST00000416742 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
LINC00494-201ENST00000416742 C3P01024 1663 aa12.56□□□□□ -0.4
LINC00494-201ENST00000416742 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
LINC00494-201ENST00000416742 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
LINC00494-201ENST00000416742 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
LINC00494-201ENST00000416742 FOXO3O43524 673 aa12.55□□□□□ -0.4
LINC00494-201ENST00000416742 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
LINC00494-201ENST00000416742 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
LINC00494-201ENST00000416742 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
LINC00494-201ENST00000416742 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
LINC00494-201ENST00000416742 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
LINC00494-201ENST00000416742 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
LINC00494-201ENST00000416742 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
LINC00494-201ENST00000416742 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
LINC00494-201ENST00000416742 CHMP4BQ9H444 224 aaKnown RBP12.54□□□□□ -0.4
LINC00494-201ENST00000416742 TTC21AQ8NDW8 1320 aa12.54□□□□□ -0.4
LINC00494-201ENST00000416742 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
LINC00494-201ENST00000416742 BECN1Q14457 450 aa12.54□□□□□ -0.4
LINC00494-201ENST00000416742 NFKBIBQ15653 356 aa12.53□□□□□ -0.4
LINC00494-201ENST00000416742 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
LINC00494-201ENST00000416742 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
LINC00494-201ENST00000416742 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.4
LINC00494-201ENST00000416742 CHD1LQ86WJ1 897 aa12.52□□□□□ -0.4
LINC00494-201ENST00000416742 ABTB2Q8N961 1025 aa12.52□□□□□ -0.4
LINC00494-201ENST00000416742 CHL1O00533 1208 aa12.52□□□□□ -0.41
LINC00494-201ENST00000416742 NUCB1Q02818 461 aa12.52□□□□□ -0.41
LINC00494-201ENST00000416742 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
LINC00494-201ENST00000416742 ARHGAP23Q9P227 1491 aa12.52□□□□□ -0.41
LINC00494-201ENST00000416742 EYA1Q99502 592 aa12.51□□□□□ -0.41
LINC00494-201ENST00000416742 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
LINC00494-201ENST00000416742 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
LINC00494-201ENST00000416742 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
LINC00494-201ENST00000416742 TBC1D32Q96NH3 1257 aa12.51□□□□□ -0.41
LINC00494-201ENST00000416742 SLIT1O75093 1534 aa12.51□□□□□ -0.41
LINC00494-201ENST00000416742 ABCC4O15439 1325 aa12.51□□□□□ -0.41
LINC00494-201ENST00000416742 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
LINC00494-201ENST00000416742 FLT4P35916 1363 aa12.5□□□□□ -0.41
LINC00494-201ENST00000416742 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
LINC00494-201ENST00000416742 PTCH1Q13635 1447 aa12.5□□□□□ -0.41
LINC00494-201ENST00000416742 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
LINC00494-201ENST00000416742 FER1L4A9Z1Z3 1794 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 C22orf23Q9BZE7 217 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 SBNO1A3KN83 1393 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 ANKLE2Q86XL3 938 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 SIRT2Q8IXJ6 389 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 PIK3R4Q99570 1358 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 GCC1Q96CN9 775 aa12.49□□□□□ -0.41
LINC00494-201ENST00000416742 DIP2AQ14689 1571 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms