RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
SMPD4P1-201ENST00000416717 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
SMPD4P1-201ENST00000416717 C19orf44Q9H6X5 657 aa13.92□□□□□ -0.18
SMPD4P1-201ENST00000416717 STRCQ7RTU9 1775 aa13.92□□□□□ -0.18
SMPD4P1-201ENST00000416717 BCAR3O75815 825 aa13.91□□□□□ -0.18
SMPD4P1-201ENST00000416717 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
SMPD4P1-201ENST00000416717 TSR2Q969E8 191 aaKnown RBP13.91□□□□□ -0.18
SMPD4P1-201ENST00000416717 DLG5Q8TDM6 1919 aa13.91□□□□□ -0.18
SMPD4P1-201ENST00000416717 ZBTB7CA1YPR0 619 aa13.9□□□□□ -0.18
SMPD4P1-201ENST00000416717 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
SMPD4P1-201ENST00000416717 ATF3P18847 181 aa13.9□□□□□ -0.18
SMPD4P1-201ENST00000416717 DDX17Q92841 729 aaKnown RBP13.89□□□□□ -0.19
SMPD4P1-201ENST00000416717 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
SMPD4P1-201ENST00000416717 THUMPD2Q9BTF0 503 aaKnown RBP13.89□□□□□ -0.19
SMPD4P1-201ENST00000416717 C1orf167Q5SNV9 1468 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 NFE2L2Q16236 605 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 MYH16Q9H6N6 1097 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 FLT4P35916 1363 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 LTN1O94822 1766 aa13.88□□□□□ -0.19
SMPD4P1-201ENST00000416717 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
SMPD4P1-201ENST00000416717 BCL2L13Q9BXK5 485 aa13.87□□□□□ -0.19
SMPD4P1-201ENST00000416717 XIRP1Q702N8 1843 aaKnown RBP13.86□□□□□ -0.19
SMPD4P1-201ENST00000416717 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
SMPD4P1-201ENST00000416717 ZNF335Q9H4Z2 1342 aaPredicted RBP13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 HOXC9P31274 260 aa13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 USP54Q70EL1 1684 aa13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.85□□□□□ -0.19
SMPD4P1-201ENST00000416717 EXOSC9Q06265 439 aaKnown RBP13.84□□□□□ -0.19
SMPD4P1-201ENST00000416717 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
SMPD4P1-201ENST00000416717 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
SMPD4P1-201ENST00000416717 MST1RQ04912 1400 aa13.84□□□□□ -0.19
SMPD4P1-201ENST00000416717 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
SMPD4P1-201ENST00000416717 EYA1Q99502 592 aa13.84□□□□□ -0.19
SMPD4P1-201ENST00000416717 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.2
SMPD4P1-201ENST00000416717 KIF1AQ12756 1690 aa13.83□□□□□ -0.2
SMPD4P1-201ENST00000416717 MSH6P52701 1360 aa13.83□□□□□ -0.2
SMPD4P1-201ENST00000416717 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.2
SMPD4P1-201ENST00000416717 TRPM3Q9HCF6 1732 aaPredicted RBP13.82□□□□□ -0.2
SMPD4P1-201ENST00000416717 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
SMPD4P1-201ENST00000416717 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
SMPD4P1-201ENST00000416717 NFAT5O94916 1531 aa13.81□□□□□ -0.2
SMPD4P1-201ENST00000416717 ARHGEF10O15013 1369 aa13.81□□□□□ -0.2
SMPD4P1-201ENST00000416717 IL16Q14005 1332 aa13.81□□□□□ -0.2
SMPD4P1-201ENST00000416717 GCP02774 474 aa13.8□□□□□ -0.2
SMPD4P1-201ENST00000416717 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
SMPD4P1-201ENST00000416717 KCNH5Q8NCM2 988 aa13.8□□□□□ -0.2
SMPD4P1-201ENST00000416717 MCM10Q7L590 875 aa13.79□□□□□ -0.2
SMPD4P1-201ENST00000416717 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
SMPD4P1-201ENST00000416717 DCCP43146 1447 aa13.79□□□□□ -0.2
SMPD4P1-201ENST00000416717 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
SMPD4P1-201ENST00000416717 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
SMPD4P1-201ENST00000416717 NCOA3Q9Y6Q9 1424 aa13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 IP6K1Q92551 441 aa13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 ZC3H6P61129 1189 aaKnown RBP13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
SMPD4P1-201ENST00000416717 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.2
SMPD4P1-201ENST00000416717 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.21
SMPD4P1-201ENST00000416717 SMC4Q9NTJ3 1288 aa13.77□□□□□ -0.21
SMPD4P1-201ENST00000416717 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
SMPD4P1-201ENST00000416717 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 MBIPQ9NS73 344 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 RTL1A6NKG5 1358 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 KDRP35968 1356 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 GNAI1P63096 354 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 SSH1Q8WYL5 1049 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
SMPD4P1-201ENST00000416717 IFT57Q9NWB7 429 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 NPHP3Q7Z494 1330 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 SLIT3O75094 1523 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 TSPYL6Q8N831 410 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
SMPD4P1-201ENST00000416717 TCERG1O14776 1098 aaKnown RBP13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 BRINP3Q76B58 766 aa13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 USP19O94966 1318 aa13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 MED1Q15648 1581 aaPredicted RBP13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 RLBP1P12271 317 aa13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
SMPD4P1-201ENST00000416717 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
SMPD4P1-201ENST00000416717 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
SMPD4P1-201ENST00000416717 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SMPD4P1-201ENST00000416717 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
SMPD4P1-201ENST00000416717 CT47B1P0C2W7 299 aaPredicted RBP13.73□□□□□ -0.21
SMPD4P1-201ENST00000416717 PDE3AQ14432 1141 aa13.73□□□□□ -0.21
SMPD4P1-201ENST00000416717 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms