RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 FLT4P35916 1363 aa23.69■■□□□ 1.38
RTN4R-202ENST00000416372 TMPOP42166 694 aaKnown RBP23.68■■□□□ 1.38
RTN4R-202ENST00000416372 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
RTN4R-202ENST00000416372 TRMT2AQ8IZ69 625 aaKnown RBP23.67■■□□□ 1.38
RTN4R-202ENST00000416372 TRPM3Q9HCF6 1732 aaPredicted RBP23.66■■□□□ 1.38
RTN4R-202ENST00000416372 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
RTN4R-202ENST00000416372 SPINK5Q9NQ38 1064 aaPredicted RBP23.66■■□□□ 1.38
RTN4R-202ENST00000416372 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
RTN4R-202ENST00000416372 LMOD2Q6P5Q4 547 aa23.64■■□□□ 1.37
RTN4R-202ENST00000416372 KCNH5Q8NCM2 988 aa23.63■■□□□ 1.37
RTN4R-202ENST00000416372 RIPK4P57078 832 aa23.63■■□□□ 1.37
RTN4R-202ENST00000416372 HOXC9P31274 260 aa23.61■■□□□ 1.37
RTN4R-202ENST00000416372 ERICH6BQ5W0A0 696 aa23.61■■□□□ 1.37
RTN4R-202ENST00000416372 NFAT5O94916 1531 aa23.61■■□□□ 1.37
RTN4R-202ENST00000416372 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
RTN4R-202ENST00000416372 PHACTR3Q96KR7 559 aa23.6■■□□□ 1.37
RTN4R-202ENST00000416372 LTN1O94822 1766 aa23.6■■□□□ 1.37
RTN4R-202ENST00000416372 RGPD1P0DJD0 1748 aa23.6■■□□□ 1.37
RTN4R-202ENST00000416372 SULT6B1Q6IMI4 303 aa23.6■■□□□ 1.37
RTN4R-202ENST00000416372 TRIM35Q9UPQ4 493 aa23.6■■□□□ 1.37
RTN4R-202ENST00000416372 RTL1A6NKG5 1358 aa23.59■■□□□ 1.37
RTN4R-202ENST00000416372 NFE2L2Q16236 605 aa23.59■■□□□ 1.37
RTN4R-202ENST00000416372 DDX17Q92841 729 aaKnown RBP23.59■■□□□ 1.37
RTN4R-202ENST00000416372 RRP1P56182 461 aaKnown RBP23.58■■□□□ 1.37
RTN4R-202ENST00000416372 ARHGEF10O15013 1369 aa23.58■■□□□ 1.37
RTN4R-202ENST00000416372 AEBP1Q8IUX7 1158 aa23.57■■□□□ 1.36
RTN4R-202ENST00000416372 SLIT3O75094 1523 aa23.57■■□□□ 1.36
RTN4R-202ENST00000416372 ALS2Q96Q42 1657 aa23.57■■□□□ 1.36
RTN4R-202ENST00000416372 PLEKHG5O94827 1062 aa23.56■■□□□ 1.36
RTN4R-202ENST00000416372 GCP02774 474 aa23.56■■□□□ 1.36
RTN4R-202ENST00000416372 USP19O94966 1318 aa23.56■■□□□ 1.36
RTN4R-202ENST00000416372 MYH16Q9H6N6 1097 aa23.55■■□□□ 1.36
RTN4R-202ENST00000416372 SLAIN2Q9P270 581 aa23.55■■□□□ 1.36
RTN4R-202ENST00000416372 BRINP3Q76B58 766 aa23.55■■□□□ 1.36
RTN4R-202ENST00000416372 IP6K1Q92551 441 aa23.55■■□□□ 1.36
RTN4R-202ENST00000416372 ZBTB7CA1YPR0 619 aa23.54■■□□□ 1.36
RTN4R-202ENST00000416372 IL16Q14005 1332 aa23.53■■□□□ 1.36
RTN4R-202ENST00000416372 EYA1Q99502 592 aa23.52■■□□□ 1.36
RTN4R-202ENST00000416372 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
RTN4R-202ENST00000416372 PXDNQ92626 1479 aa23.52■■□□□ 1.36
RTN4R-202ENST00000416372 LTV1Q96GA3 475 aaPredicted RBP23.52■■□□□ 1.36
RTN4R-202ENST00000416372 PHRF1Q9P1Y6 1649 aaKnown RBP23.51■■□□□ 1.35
RTN4R-202ENST00000416372 TNS3Q68CZ2 1445 aa23.51■■□□□ 1.35
RTN4R-202ENST00000416372 LMOD3Q0VAK6 560 aa23.5■■□□□ 1.35
RTN4R-202ENST00000416372 ARHGEF25Q86VW2 580 aa23.5■■□□□ 1.35
RTN4R-202ENST00000416372 DLG5Q8TDM6 1919 aa23.49■■□□□ 1.35
RTN4R-202ENST00000416372 KDRP35968 1356 aa23.49■■□□□ 1.35
RTN4R-202ENST00000416372 ILDR1Q86SU0 546 aaPredicted RBP23.48■■□□□ 1.35
RTN4R-202ENST00000416372 PPP4R2Q9NY27 417 aa23.48■■□□□ 1.35
RTN4R-202ENST00000416372 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
RTN4R-202ENST00000416372 SPATA31A3Q5VYP0 1347 aa23.48■■□□□ 1.35
RTN4R-202ENST00000416372 CALD1Q05682 793 aaKnown RBP23.47■■□□□ 1.35
RTN4R-202ENST00000416372 PLIN1O60240 522 aa23.46■■□□□ 1.35
RTN4R-202ENST00000416372 FANCIQ9NVI1 1328 aa23.46■■□□□ 1.35
RTN4R-202ENST00000416372 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.34
RTN4R-202ENST00000416372 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
RTN4R-202ENST00000416372 ZC3H6P61129 1189 aaKnown RBP23.43■■□□□ 1.34
RTN4R-202ENST00000416372 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
RTN4R-202ENST00000416372 SOS2Q07890 1332 aaPredicted RBP23.42■■□□□ 1.34
RTN4R-202ENST00000416372 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
RTN4R-202ENST00000416372 BCAR3O75815 825 aa23.4■■□□□ 1.34
RTN4R-202ENST00000416372 MYT1Q01538 1121 aa23.4■■□□□ 1.34
RTN4R-202ENST00000416372 CABLES1Q8TDN4 633 aa23.4■■□□□ 1.34
RTN4R-202ENST00000416372 FAM83GA6ND36 823 aa23.4■■□□□ 1.34
RTN4R-202ENST00000416372 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
RTN4R-202ENST00000416372 USHBP1Q8N6Y0 703 aa23.4■■□□□ 1.34
RTN4R-202ENST00000416372 CT47B1P0C2W7 299 aaPredicted RBP23.39■■□□□ 1.33
RTN4R-202ENST00000416372 GNAI1P63096 354 aa23.39■■□□□ 1.33
RTN4R-202ENST00000416372 MTHFSDQ2M296 383 aaKnown RBP23.39■■□□□ 1.33
RTN4R-202ENST00000416372 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
RTN4R-202ENST00000416372 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
RTN4R-202ENST00000416372 IFT57Q9NWB7 429 aa23.39■■□□□ 1.33
RTN4R-202ENST00000416372 GAS2L2Q8NHY3 880 aa23.38■■□□□ 1.33
RTN4R-202ENST00000416372 ANKRD24Q8TF21 1146 aa23.38■■□□□ 1.33
RTN4R-202ENST00000416372 CRYBG1Q9Y4K1 1723 aa23.38■■□□□ 1.33
RTN4R-202ENST00000416372 RARSP54136 660 aaKnown RBP23.37■■□□□ 1.33
RTN4R-202ENST00000416372 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
RTN4R-202ENST00000416372 RGPD2P0DJD1 1756 aa23.37■■□□□ 1.33
RTN4R-202ENST00000416372 LTBP4Q8N2S1 1624 aa23.37■■□□□ 1.33
RTN4R-202ENST00000416372 NHSL1Q5SYE7 1610 aa23.37■■□□□ 1.33
RTN4R-202ENST00000416372 EXOC6Q8TAG9 804 aa23.37■■□□□ 1.33
RTN4R-202ENST00000416372 AXIN2Q9Y2T1 843 aa23.37■■□□□ 1.33
RTN4R-202ENST00000416372 LRRC59Q96AG4 307 aaKnown RBP23.36■■□□□ 1.33
RTN4R-202ENST00000416372 RGPD5Q99666 1765 aa23.36■■□□□ 1.33
RTN4R-202ENST00000416372 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
RTN4R-202ENST00000416372 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
RTN4R-202ENST00000416372 C20orf194Q5TEA3 1177 aa23.34■■□□□ 1.33
RTN4R-202ENST00000416372 B4GALNT3Q6L9W6 998 aa23.34■■□□□ 1.33
RTN4R-202ENST00000416372 MCM10Q7L590 875 aa23.34■■□□□ 1.33
RTN4R-202ENST00000416372 RTF1Q92541 710 aaKnown RBP23.34■■□□□ 1.33
RTN4R-202ENST00000416372 CRBNQ96SW2 442 aa23.33■■□□□ 1.33
RTN4R-202ENST00000416372 CANXP27824 592 aaKnown RBP23.32■■□□□ 1.32
RTN4R-202ENST00000416372 MBIPQ9NS73 344 aa23.32■■□□□ 1.32
RTN4R-202ENST00000416372 COL18A1P39060 1754 aa23.31■■□□□ 1.32
RTN4R-202ENST00000416372 ABCC6O95255 1503 aa23.31■■□□□ 1.32
RTN4R-202ENST00000416372 CPDO75976 1380 aa23.31■■□□□ 1.32
RTN4R-202ENST00000416372 HTATSF1O43719 755 aaKnown RBP23.3■■□□□ 1.32
RTN4R-202ENST00000416372 TSHZ2Q9NRE2 1034 aa23.3■■□□□ 1.32
RTN4R-202ENST00000416372 ERBB3P21860 1342 aa23.3■■□□□ 1.32
RTN4R-202ENST00000416372 KIAA0232Q92628 1395 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms