RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CLCN1P35523 988 aa15.45■□□□□ 0.06
SCN1B-202ENST00000415950 G3V3G9 751 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 DTNBO60941 627 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 TRDNQ13061 729 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 NFXL1Q6ZNB6 911 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 STK11IPQ8N1F8 1099 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 TESK2Q96S53 571 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 MAP7D2Q96T17 732 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 CAMK4Q16566 473 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 TXNDC2Q86VQ3 553 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 GPRASP1Q5JY77 1395 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 NUTM1Q86Y26 1132 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 C16orf71Q8IYS4 520 aaPredicted RBP15.44■□□□□ 0.06
SCN1B-202ENST00000415950 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
SCN1B-202ENST00000415950 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
SCN1B-202ENST00000415950 CWC27Q6UX04 472 aaKnown RBP15.43■□□□□ 0.06
SCN1B-202ENST00000415950 FAM83GA6ND36 823 aa15.43■□□□□ 0.06
SCN1B-202ENST00000415950 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 ARHGAP5Q13017 1502 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 SCAPERQ9BY12 1400 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 CWC22Q9HCG8 908 aaKnown RBP15.42■□□□□ 0.06
SCN1B-202ENST00000415950 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
SCN1B-202ENST00000415950 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 ARGLU1Q9NWB6 273 aaPredicted RBP15.42■□□□□ 0.06
SCN1B-202ENST00000415950 GNAI2P04899 355 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 TTC5Q8N0Z6 440 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 CHMP4CQ96CF2 233 aa15.42■□□□□ 0.06
SCN1B-202ENST00000415950 SIL1Q9H173 461 aa15.41■□□□□ 0.06
SCN1B-202ENST00000415950 FAM177BA6PVY3 158 aa15.41■□□□□ 0.06
SCN1B-202ENST00000415950 NAP1L1P55209 391 aaKnown RBP15.41■□□□□ 0.06
SCN1B-202ENST00000415950 HSP90B2PQ58FF3 399 aa15.41■□□□□ 0.06
SCN1B-202ENST00000415950 CLASRPQ8N2M8 674 aaKnown RBP15.41■□□□□ 0.06
SCN1B-202ENST00000415950 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
SCN1B-202ENST00000415950 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 PPFIA3O75145 1194 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 LRRCC1Q9C099 1032 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 IGSF3O75054 1194 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 WAPLQ7Z5K2 1190 aa15.4■□□□□ 0.06
SCN1B-202ENST00000415950 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
SCN1B-202ENST00000415950 NLRP6P59044 892 aa15.39■□□□□ 0.05
SCN1B-202ENST00000415950 FSD1Q9BTV5 496 aa15.39■□□□□ 0.05
SCN1B-202ENST00000415950 FAM177A1Q8N128 213 aaPredicted RBP15.39■□□□□ 0.05
SCN1B-202ENST00000415950 HMGN5P82970 282 aaKnown RBP15.39■□□□□ 0.05
SCN1B-202ENST00000415950 KIAA0586Q9BVV6 1533 aa15.39■□□□□ 0.05
SCN1B-202ENST00000415950 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
SCN1B-202ENST00000415950 MTMR7Q9Y216 660 aa15.38■□□□□ 0.05
SCN1B-202ENST00000415950 SMC2O95347 1197 aa15.38■□□□□ 0.05
SCN1B-202ENST00000415950 GNAI3P08754 354 aa15.38■□□□□ 0.05
SCN1B-202ENST00000415950 LARP1BQ659C4 914 aaKnown RBP15.38■□□□□ 0.05
SCN1B-202ENST00000415950 GRIN2AQ12879 1464 aa15.38■□□□□ 0.05
SCN1B-202ENST00000415950 PRIM1P49642 420 aaKnown RBP15.38■□□□□ 0.05
SCN1B-202ENST00000415950 PDCL3Q9H2J4 239 aa15.38■□□□□ 0.05
SCN1B-202ENST00000415950 NINLQ9Y2I6 1382 aa15.38■□□□□ 0.05
SCN1B-202ENST00000415950 CAMSAP2Q08AD1 1489 aa15.37■□□□□ 0.05
SCN1B-202ENST00000415950 KDM2BQ8NHM5 1336 aa15.37■□□□□ 0.05
SCN1B-202ENST00000415950 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
SCN1B-202ENST00000415950 LRRFIP1Q32MZ4 808 aaKnown RBP15.37■□□□□ 0.05
SCN1B-202ENST00000415950 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
SCN1B-202ENST00000415950 CNTROBQ8N137 903 aa15.37■□□□□ 0.05
SCN1B-202ENST00000415950 ZGPATQ8N5A5 531 aaKnown RBP15.37■□□□□ 0.05
SCN1B-202ENST00000415950 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
SCN1B-202ENST00000415950 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
SCN1B-202ENST00000415950 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 NFE2L2Q16236 605 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 ZSCAN23Q3MJ62 389 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 MTERF4Q7Z6M4 381 aaKnown RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 BRPF1P55201 1214 aaPredicted RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 RUFY1Q96T51 708 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 FCHSD2O94868 740 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 MCM2P49736 904 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 CKAP2LQ8IYA6 745 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 BMP2KLQ5H9B9 411 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
SCN1B-202ENST00000415950 DNAJC2Q99543 621 aaKnown RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 HOOK1Q9UJC3 728 aaKnown RBP15.36■□□□□ 0.05
SCN1B-202ENST00000415950 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
SCN1B-202ENST00000415950 SAFBQ15424 915 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCN1B-202ENST00000415950 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
SCN1B-202ENST00000415950 ERICH4A6NGS2 130 aa15.35■□□□□ 0.05
SCN1B-202ENST00000415950 TNMDQ9H2S6 317 aa15.35■□□□□ 0.05
SCN1B-202ENST00000415950 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
SCN1B-202ENST00000415950 HSP90AB4PQ58FF6 505 aa15.35■□□□□ 0.05
SCN1B-202ENST00000415950 TTC12Q9H892 705 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms