RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 NRKQ7Z2Y5 1582 aa15.77■□□□□ 0.11
UBA3-203ENST00000415609 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
UBA3-203ENST00000415609 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
UBA3-203ENST00000415609 DDX19BQ9UMR2 479 aa15.76■□□□□ 0.11
UBA3-203ENST00000415609 IPO8O15397 1037 aaKnown RBP15.75■□□□□ 0.11
UBA3-203ENST00000415609 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
UBA3-203ENST00000415609 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
UBA3-203ENST00000415609 PDZRN3Q9UPQ7 1066 aa15.75■□□□□ 0.11
UBA3-203ENST00000415609 ACEP12821 1306 aa15.75■□□□□ 0.11
UBA3-203ENST00000415609 TTC21BQ7Z4L5 1316 aa15.75■□□□□ 0.11
UBA3-203ENST00000415609 PTPRUQ92729 1446 aa15.75■□□□□ 0.11
UBA3-203ENST00000415609 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
UBA3-203ENST00000415609 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
UBA3-203ENST00000415609 TMEM57Q8N5G2 664 aa15.73■□□□□ 0.11
UBA3-203ENST00000415609 SLIT1O75093 1534 aa15.73■□□□□ 0.11
UBA3-203ENST00000415609 GNAI1P63096 354 aa15.73■□□□□ 0.11
UBA3-203ENST00000415609 IFT57Q9NWB7 429 aa15.73■□□□□ 0.11
UBA3-203ENST00000415609 USP6P35125 1406 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 DLG5Q8TDM6 1919 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 PLEKHG3A1L390 1219 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 OVOS2A0A0J9YW53 1432 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 OVOS2Q6IE36 1432 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 AMOTL2Q9Y2J4 779 aa15.72■□□□□ 0.11
UBA3-203ENST00000415609 ARHGAP23Q9P227 1491 aa15.71■□□□□ 0.11
UBA3-203ENST00000415609 SLC4A3P48751 1232 aa15.7■□□□□ 0.1
UBA3-203ENST00000415609 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
UBA3-203ENST00000415609 HDAC1Q13547 482 aaPredicted RBP15.7■□□□□ 0.1
UBA3-203ENST00000415609 EIF4A2Q14240 407 aaKnown RBP15.7■□□□□ 0.1
UBA3-203ENST00000415609 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
UBA3-203ENST00000415609 VAMP4O75379 141 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 ZNF853P0CG23 659 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 FAM83GA6ND36 823 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 ELL2O00472 640 aaPredicted RBP15.68■□□□□ 0.1
UBA3-203ENST00000415609 SEC24BO95487 1268 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
UBA3-203ENST00000415609 BRPF1P55201 1214 aaPredicted RBP15.68■□□□□ 0.1
UBA3-203ENST00000415609 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 AEBP1Q8IUX7 1158 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 ZBTB40Q9NUA8 1239 aa15.68■□□□□ 0.1
UBA3-203ENST00000415609 SOX12O15370 315 aa15.67■□□□□ 0.1
UBA3-203ENST00000415609 THEMISQ8N1K5 641 aaPredicted RBP15.67■□□□□ 0.1
UBA3-203ENST00000415609 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
UBA3-203ENST00000415609 PEAK1Q9H792 1746 aa15.67■□□□□ 0.1
UBA3-203ENST00000415609 DIP2AQ14689 1571 aa15.67■□□□□ 0.1
UBA3-203ENST00000415609 USP19O94966 1318 aa15.67■□□□□ 0.1
UBA3-203ENST00000415609 DCTN1Q14203 1278 aa15.67■□□□□ 0.1
UBA3-203ENST00000415609 TWISTNBQ3B726 338 aaPredicted RBP15.67■□□□□ 0.1
UBA3-203ENST00000415609 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
UBA3-203ENST00000415609 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
UBA3-203ENST00000415609 UPF2Q9HAU5 1272 aaKnown RBP15.65■□□□□ 0.1
UBA3-203ENST00000415609 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
UBA3-203ENST00000415609 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
UBA3-203ENST00000415609 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
UBA3-203ENST00000415609 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
UBA3-203ENST00000415609 ARHGAP45Q92619 1136 aa15.64■□□□□ 0.09
UBA3-203ENST00000415609 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
UBA3-203ENST00000415609 RGPD8O14715 1765 aaPredicted RBP15.63■□□□□ 0.09
UBA3-203ENST00000415609 RGPD1P0DJD0 1748 aa15.63■□□□□ 0.09
UBA3-203ENST00000415609 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
UBA3-203ENST00000415609 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
UBA3-203ENST00000415609 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
UBA3-203ENST00000415609 CHMP4BQ9H444 224 aaKnown RBP15.62■□□□□ 0.09
UBA3-203ENST00000415609 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
UBA3-203ENST00000415609 RIMS1Q86UR5 1692 aaKnown RBP15.61■□□□□ 0.09
UBA3-203ENST00000415609 MAP3K19Q56UN5 1328 aa15.61■□□□□ 0.09
UBA3-203ENST00000415609 ABCC4O15439 1325 aa15.6■□□□□ 0.09
UBA3-203ENST00000415609 ZBTB7BO15156 539 aaPredicted RBP15.6■□□□□ 0.09
UBA3-203ENST00000415609 MCM10Q7L590 875 aa15.6■□□□□ 0.09
UBA3-203ENST00000415609 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
UBA3-203ENST00000415609 PIK3C2AO00443 1686 aa15.59■□□□□ 0.09
UBA3-203ENST00000415609 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
UBA3-203ENST00000415609 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
UBA3-203ENST00000415609 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
UBA3-203ENST00000415609 FLT4P35916 1363 aa15.59■□□□□ 0.09
UBA3-203ENST00000415609 CEP170BQ9Y4F5 1589 aaPredicted RBP15.59■□□□□ 0.09
UBA3-203ENST00000415609 KCNA6P17658 529 aa15.58■□□□□ 0.09
UBA3-203ENST00000415609 NUCB1Q02818 461 aa15.58■□□□□ 0.08
UBA3-203ENST00000415609 BECN1Q14457 450 aa15.58■□□□□ 0.08
UBA3-203ENST00000415609 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.08
UBA3-203ENST00000415609 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
UBA3-203ENST00000415609 AMPHP49418 695 aa15.57■□□□□ 0.08
UBA3-203ENST00000415609 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
UBA3-203ENST00000415609 LNPKQ9C0E8 428 aa15.56■□□□□ 0.08
UBA3-203ENST00000415609 CHL1O00533 1208 aa15.56■□□□□ 0.08
UBA3-203ENST00000415609 CHD1LQ86WJ1 897 aa15.56■□□□□ 0.08
UBA3-203ENST00000415609 NLRP6P59044 892 aa15.55■□□□□ 0.08
UBA3-203ENST00000415609 NFKBIBQ15653 356 aa15.55■□□□□ 0.08
UBA3-203ENST00000415609 KRT24Q2M2I5 525 aa15.55■□□□□ 0.08
UBA3-203ENST00000415609 GCC1Q96CN9 775 aa15.55■□□□□ 0.08
UBA3-203ENST00000415609 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
UBA3-203ENST00000415609 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
UBA3-203ENST00000415609 MTHFSDQ2M296 383 aaKnown RBP15.53■□□□□ 0.08
UBA3-203ENST00000415609 NUTM2GQ5VZR2 741 aa15.53■□□□□ 0.08
UBA3-203ENST00000415609 RTF1Q92541 710 aaKnown RBP15.53■□□□□ 0.08
UBA3-203ENST00000415609 CRB1P82279 1406 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms