RNA–Protein interactions for RNA: ENST00000414822.7

CDKN1C-202, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-202ENST00000414822 NFE2L2Q16236 605 aa28.46■■■□□ 2.15
CDKN1C-202ENST00000414822 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.46■■■□□ 2.15
CDKN1C-202ENST00000414822 CCDC136Q96JN2 1154 aa28.45■■■□□ 2.14
CDKN1C-202ENST00000414822 MARF1Q9Y4F3 1742 aaKnown RBP28.45■■■□□ 2.14
CDKN1C-202ENST00000414822 SULT6B1Q6IMI4 303 aa28.44■■■□□ 2.14
CDKN1C-202ENST00000414822 AEBP1Q8IUX7 1158 aa28.44■■■□□ 2.14
CDKN1C-202ENST00000414822 C1orf167Q5SNV9 1468 aa28.44■■■□□ 2.14
CDKN1C-202ENST00000414822 USP54Q70EL1 1684 aa28.44■■■□□ 2.14
CDKN1C-202ENST00000414822 BCAR3O75815 825 aa28.44■■■□□ 2.14
CDKN1C-202ENST00000414822 ATF3P18847 181 aa28.44■■■□□ 2.14
CDKN1C-202ENST00000414822 XPCQ01831 940 aaPredicted RBP28.43■■■□□ 2.14
CDKN1C-202ENST00000414822 C20orf194Q5TEA3 1177 aa28.42■■■□□ 2.14
CDKN1C-202ENST00000414822 IL16Q14005 1332 aa28.42■■■□□ 2.14
CDKN1C-202ENST00000414822 TSR2Q969E8 191 aaKnown RBP28.41■■■□□ 2.14
CDKN1C-202ENST00000414822 FANCIQ9NVI1 1328 aa28.41■■■□□ 2.14
CDKN1C-202ENST00000414822 CRBNQ96SW2 442 aa28.41■■■□□ 2.14
CDKN1C-202ENST00000414822 NCOA3Q9Y6Q9 1424 aa28.39■■■□□ 2.14
CDKN1C-202ENST00000414822 HOXC9P31274 260 aa28.37■■■□□ 2.13
CDKN1C-202ENST00000414822 KIF24Q5T7B8 1368 aa28.37■■■□□ 2.13
CDKN1C-202ENST00000414822 DCCP43146 1447 aa28.37■■■□□ 2.13
CDKN1C-202ENST00000414822 RGPD1P0DJD0 1748 aa28.37■■■□□ 2.13
CDKN1C-202ENST00000414822 STRCQ7RTU9 1775 aa28.37■■■□□ 2.13
CDKN1C-202ENST00000414822 MST1RQ04912 1400 aa28.36■■■□□ 2.13
CDKN1C-202ENST00000414822 ARHGEF10O15013 1369 aa28.36■■■□□ 2.13
CDKN1C-202ENST00000414822 RARSP54136 660 aaKnown RBP28.35■■■□□ 2.13
CDKN1C-202ENST00000414822 KRT28Q7Z3Y7 464 aa28.35■■■□□ 2.13
CDKN1C-202ENST00000414822 KIF1AQ12756 1690 aa28.34■■■□□ 2.13
CDKN1C-202ENST00000414822 LMOD2Q6P5Q4 547 aa28.34■■■□□ 2.13
CDKN1C-202ENST00000414822 THUMPD2Q9BTF0 503 aaKnown RBP28.34■■■□□ 2.13
CDKN1C-202ENST00000414822 EXOSC9Q06265 439 aaKnown RBP28.33■■■□□ 2.13
CDKN1C-202ENST00000414822 LMOD3Q0VAK6 560 aa28.33■■■□□ 2.13
CDKN1C-202ENST00000414822 CADPS2Q86UW7 1296 aa28.33■■■□□ 2.13
CDKN1C-202ENST00000414822 MSH6P52701 1360 aa28.32■■■□□ 2.12
CDKN1C-202ENST00000414822 CALD1Q05682 793 aaKnown RBP28.31■■■□□ 2.12
CDKN1C-202ENST00000414822 KCNH5Q8NCM2 988 aa28.31■■■□□ 2.12
CDKN1C-202ENST00000414822 EYA1Q99502 592 aa28.31■■■□□ 2.12
CDKN1C-202ENST00000414822 LAS1LQ9Y4W2 734 aaKnown RBP28.31■■■□□ 2.12
CDKN1C-202ENST00000414822 NFAT5O94916 1531 aa28.31■■■□□ 2.12
CDKN1C-202ENST00000414822 PLEKHG5O94827 1062 aa28.3■■■□□ 2.12
CDKN1C-202ENST00000414822 CANXP27824 592 aaKnown RBP28.3■■■□□ 2.12
CDKN1C-202ENST00000414822 RTL1A6NKG5 1358 aa28.3■■■□□ 2.12
CDKN1C-202ENST00000414822 IGSF1Q8N6C5 1336 aa28.3■■■□□ 2.12
CDKN1C-202ENST00000414822 CT47B1P0C2W7 299 aaPredicted RBP28.29■■■□□ 2.12
CDKN1C-202ENST00000414822 LTV1Q96GA3 475 aaPredicted RBP28.29■■■□□ 2.12
CDKN1C-202ENST00000414822 BCL2L13Q9BXK5 485 aa28.29■■■□□ 2.12
CDKN1C-202ENST00000414822 ZBTB7CA1YPR0 619 aa28.28■■■□□ 2.12
CDKN1C-202ENST00000414822 FAM83GA6ND36 823 aa28.28■■■□□ 2.12
CDKN1C-202ENST00000414822 FRAT1Q92837 279 aaPredicted RBP28.28■■■□□ 2.12
CDKN1C-202ENST00000414822 TRPM3Q9HCF6 1732 aaPredicted RBP28.28■■■□□ 2.12
CDKN1C-202ENST00000414822 KDRP35968 1356 aa28.27■■■□□ 2.12
CDKN1C-202ENST00000414822 ZNF335Q9H4Z2 1342 aaPredicted RBP28.27■■■□□ 2.12
CDKN1C-202ENST00000414822 DLG5Q8TDM6 1919 aa28.26■■■□□ 2.11
CDKN1C-202ENST00000414822 LTN1O94822 1766 aa28.26■■■□□ 2.11
CDKN1C-202ENST00000414822 GCP02774 474 aa28.25■■■□□ 2.11
CDKN1C-202ENST00000414822 IP6K1Q92551 441 aa28.25■■■□□ 2.11
CDKN1C-202ENST00000414822 DCTN1Q14203 1278 aa28.25■■■□□ 2.11
CDKN1C-202ENST00000414822 DDX17Q92841 729 aaKnown RBP28.25■■■□□ 2.11
CDKN1C-202ENST00000414822 TSHZ2Q9NRE2 1034 aa28.25■■■□□ 2.11
CDKN1C-202ENST00000414822 IFT57Q9NWB7 429 aa28.25■■■□□ 2.11
CDKN1C-202ENST00000414822 GNAI1P63096 354 aa28.24■■■□□ 2.11
CDKN1C-202ENST00000414822 SLIT3O75094 1523 aa28.22■■■□□ 2.11
CDKN1C-202ENST00000414822 PDE3AQ14432 1141 aa28.22■■■□□ 2.11
CDKN1C-202ENST00000414822 USP19O94966 1318 aa28.21■■■□□ 2.11
CDKN1C-202ENST00000414822 XIRP1Q702N8 1843 aaKnown RBP28.21■■■□□ 2.11
CDKN1C-202ENST00000414822 ZNF853P0CG23 659 aa28.2■■■□□ 2.11
CDKN1C-202ENST00000414822 MTHFSDQ2M296 383 aaKnown RBP28.2■■■□□ 2.1
CDKN1C-202ENST00000414822 SMC4Q9NTJ3 1288 aa28.2■■■□□ 2.1
CDKN1C-202ENST00000414822 NPHP3Q7Z494 1330 aa28.19■■■□□ 2.1
CDKN1C-202ENST00000414822 CFAP44Q96MT7 982 aa28.19■■■□□ 2.1
CDKN1C-202ENST00000414822 MBIPQ9NS73 344 aa28.19■■■□□ 2.1
CDKN1C-202ENST00000414822 PANK1Q8TE04 598 aa28.19■■■□□ 2.1
CDKN1C-202ENST00000414822 ARHGEF25Q86VW2 580 aa28.18■■■□□ 2.1
CDKN1C-202ENST00000414822 MCM10Q7L590 875 aa28.17■■■□□ 2.1
CDKN1C-202ENST00000414822 SSH1Q8WYL5 1049 aa28.17■■■□□ 2.1
CDKN1C-202ENST00000414822 USHBP1Q8N6Y0 703 aa28.16■■■□□ 2.1
CDKN1C-202ENST00000414822 ALS2Q96Q42 1657 aa28.16■■■□□ 2.1
CDKN1C-202ENST00000414822 GAS2L2Q8NHY3 880 aa28.15■■■□□ 2.1
CDKN1C-202ENST00000414822 PHRF1Q9P1Y6 1649 aaKnown RBP28.15■■■□□ 2.1
CDKN1C-202ENST00000414822 COG6Q9Y2V7 657 aa28.14■■■□□ 2.1
CDKN1C-202ENST00000414822 TNNQ9UQP3 1299 aa28.14■■■□□ 2.09
CDKN1C-202ENST00000414822 RTF1Q92541 710 aaKnown RBP28.12■■■□□ 2.09
CDKN1C-202ENST00000414822 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
CDKN1C-202ENST00000414822 ZKSCAN2Q63HK3 967 aa28.12■■■□□ 2.09
CDKN1C-202ENST00000414822 BRINP3Q76B58 766 aa28.12■■■□□ 2.09
CDKN1C-202ENST00000414822 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
CDKN1C-202ENST00000414822 CLUAP1Q96AJ1 413 aa28.11■■■□□ 2.09
CDKN1C-202ENST00000414822 RLBP1P12271 317 aa28.11■■■□□ 2.09
CDKN1C-202ENST00000414822 MED1Q15648 1581 aaPredicted RBP28.1■■■□□ 2.09
CDKN1C-202ENST00000414822 TSPYL6Q8N831 410 aa28.1■■■□□ 2.09
CDKN1C-202ENST00000414822 PXDNQ92626 1479 aa28.1■■■□□ 2.09
CDKN1C-202ENST00000414822 TNS3Q68CZ2 1445 aa28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 ALDH1L2Q3SY69 923 aa28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 ZNF428Q96B54 188 aa28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 ELL2O00472 640 aaPredicted RBP28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 ZC3H6P61129 1189 aaKnown RBP28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 LRRC59Q96AG4 307 aaKnown RBP28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 SLAIN2Q9P270 581 aa28.09■■■□□ 2.09
CDKN1C-202ENST00000414822 VAMP4O75379 141 aa28.08■■■□□ 2.09
CDKN1C-202ENST00000414822 CHL1O00533 1208 aa28.06■■■□□ 2.08
CDKN1C-202ENST00000414822 TWISTNBQ3B726 338 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms