RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 BCAR3O75815 825 aa11.31□□□□□ -0.6
HMGN1P34-201ENST00000413023 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 SULT6B1Q6IMI4 303 aa11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 EYA1Q99502 592 aa11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 STRCQ7RTU9 1775 aa11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 ZNF335Q9H4Z2 1342 aaPredicted RBP11.3□□□□□ -0.6
HMGN1P34-201ENST00000413023 MST1RQ04912 1400 aa11.29□□□□□ -0.6
HMGN1P34-201ENST00000413023 HOXC9P31274 260 aa11.29□□□□□ -0.6
HMGN1P34-201ENST00000413023 AMPHP49418 695 aa11.29□□□□□ -0.6
HMGN1P34-201ENST00000413023 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
HMGN1P34-201ENST00000413023 MARF1Q9Y4F3 1742 aaKnown RBP11.29□□□□□ -0.6
HMGN1P34-201ENST00000413023 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
HMGN1P34-201ENST00000413023 NCOA3Q9Y6Q9 1424 aa11.28□□□□□ -0.6
HMGN1P34-201ENST00000413023 ATF3P18847 181 aa11.28□□□□□ -0.6
HMGN1P34-201ENST00000413023 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
HMGN1P34-201ENST00000413023 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
HMGN1P34-201ENST00000413023 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
HMGN1P34-201ENST00000413023 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
HMGN1P34-201ENST00000413023 CRBNQ96SW2 442 aa11.27□□□□□ -0.61
HMGN1P34-201ENST00000413023 FAM83GA6ND36 823 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 ZNF853P0CG23 659 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 IP6K1Q92551 441 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 TNNQ9UQP3 1299 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 IL16Q14005 1332 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
HMGN1P34-201ENST00000413023 GCP02774 474 aa11.25□□□□□ -0.61
HMGN1P34-201ENST00000413023 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
HMGN1P34-201ENST00000413023 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
HMGN1P34-201ENST00000413023 FLT4P35916 1363 aa11.25□□□□□ -0.61
HMGN1P34-201ENST00000413023 MTHFSDQ2M296 383 aaKnown RBP11.24□□□□□ -0.61
HMGN1P34-201ENST00000413023 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
HMGN1P34-201ENST00000413023 MYH16Q9H6N6 1097 aa11.24□□□□□ -0.61
HMGN1P34-201ENST00000413023 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
HMGN1P34-201ENST00000413023 NBPF6Q5VWK0 638 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 NBPF4Q96M43 638 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 USP19O94966 1318 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 NFAT5O94916 1531 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 USP54Q70EL1 1684 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
HMGN1P34-201ENST00000413023 ARHGEF10O15013 1369 aa11.22□□□□□ -0.61
HMGN1P34-201ENST00000413023 DCCP43146 1447 aa11.22□□□□□ -0.61
HMGN1P34-201ENST00000413023 BRINP3Q76B58 766 aa11.22□□□□□ -0.61
HMGN1P34-201ENST00000413023 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
HMGN1P34-201ENST00000413023 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
HMGN1P34-201ENST00000413023 KDRP35968 1356 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 KIF24Q5T7B8 1368 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 TSPYL6Q8N831 410 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 KCNH5Q8NCM2 988 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 MBIPQ9NS73 344 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
HMGN1P34-201ENST00000413023 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.62
HMGN1P34-201ENST00000413023 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.62
HMGN1P34-201ENST00000413023 MSH6P52701 1360 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 VAMP4O75379 141 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 RLBP1P12271 317 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 MCM10Q7L590 875 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 C8orf58Q8NAV2 365 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 PANK1Q8TE04 598 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 LAS1LQ9Y4W2 734 aaKnown RBP11.2□□□□□ -0.62
HMGN1P34-201ENST00000413023 SLIT3O75094 1523 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 SPATA31A3Q5VYP0 1347 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 CHL1O00533 1208 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 NEFMP07197 916 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 ZC3H6P61129 1189 aaKnown RBP11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 CCDC136Q96JN2 1154 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 IFT57Q9NWB7 429 aa11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 MED1Q15648 1581 aaPredicted RBP11.19□□□□□ -0.62
HMGN1P34-201ENST00000413023 GNAI1P63096 354 aa11.18□□□□□ -0.62
HMGN1P34-201ENST00000413023 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
HMGN1P34-201ENST00000413023 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
HMGN1P34-201ENST00000413023 PXDNQ92626 1479 aa11.18□□□□□ -0.62
HMGN1P34-201ENST00000413023 CRB1P82279 1406 aa11.18□□□□□ -0.62
HMGN1P34-201ENST00000413023 RTL1A6NKG5 1358 aa11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 PDE3AQ14432 1141 aa11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
HMGN1P34-201ENST00000413023 SOS2Q07890 1332 aaPredicted RBP11.16□□□□□ -0.62
HMGN1P34-201ENST00000413023 NPHP3Q7Z494 1330 aa11.16□□□□□ -0.62
HMGN1P34-201ENST00000413023 TCERG1O14776 1098 aaKnown RBP11.16□□□□□ -0.62
HMGN1P34-201ENST00000413023 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.16□□□□□ -0.62
HMGN1P34-201ENST00000413023 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
HMGN1P34-201ENST00000413023 COG6Q9Y2V7 657 aa11.16□□□□□ -0.62
HMGN1P34-201ENST00000413023 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.62
HMGN1P34-201ENST00000413023 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms