RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ANLNQ9NQW6 1124 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 CWC25Q9NXE8 425 aaPredicted RBP5.38□□□□□ -1.55
PTPN13-202ENST00000411767 CTAGE9A4FU28 777 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 TTC12Q9H892 705 aaPredicted RBP5.38□□□□□ -1.55
PTPN13-202ENST00000411767 INPP1P49441 399 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 MAK16Q9BXY0 300 aaKnown RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 IRX3P78415 501 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 FAM43AQ8N2R8 423 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 UBXN4Q92575 508 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 ERICH2A1L162 156 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 KIF4AO95239 1232 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 LUC7L2Q9Y383 392 aaKnown RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 TRIM6-TRIM34B2RNG4 842 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 PDE4AP27815 886 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 KNSTRNQ9Y448 316 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 COPG1Q9Y678 874 aaKnown RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 ZCCHC6Q5VYS8 1495 aaKnown RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 A0A1B0GW55 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4L2P0CJ85 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4L3P0CJ86 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4L4P0CJ87 422 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4L5P0CJ88 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4L6P0CJ89 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4L7P0CJ90 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 HVCN1Q96D96 273 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 DUX4Q9UBX2 424 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 ZHX1Q9UKY1 873 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 E9PMD0 336 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 MAP3K21Q5TCX8 1036 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 PLPPR3Q6T4P5 718 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 TMC2Q8TDI7 906 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 HAUS8Q9BT25 410 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 CARD11Q9BXL7 1154 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 EIF3AQ14152 1382 aaKnown RBP5.37□□□□□ -1.55
PTPN13-202ENST00000411767 MIER3Q7Z3K6 550 aa5.37□□□□□ -1.55
PTPN13-202ENST00000411767 SH3BP5O60239 455 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 SERPINI2O75830 405 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 ARID4AP29374 1257 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 PALM3A6NDB9 673 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 SP100P23497 879 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 C16orf72Q14CZ0 275 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC178Q5BJE1 867 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 RNF214Q8ND24 703 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 TAF4BQ92750 862 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 ATP6V0A1Q93050 837 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 DACT3Q96B18 629 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 NSRP1Q9H0G5 558 aaKnown RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 ODF2LQ9ULJ1 636 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 NUCB1Q02818 461 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 AEBP1Q8IUX7 1158 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 MTUS1Q9ULD2 1270 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 KIF5BP33176 963 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 BLVRAP53004 296 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 BTN2A1Q7KYR7 527 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 DACH1Q9UI36 760 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 ESYT2A0FGR8 921 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC69A6NI79 296 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 DHX16O60231 1041 aaKnown RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 ERCC5P28715 1186 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 SEC62Q99442 399 aaKnown RBP5.36□□□□□ -1.55
PTPN13-202ENST00000411767 NDC80O14777 642 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 TMEM87AQ8NBN3 555 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 SPRYD3Q8NCJ5 442 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 TUBB1Q9H4B7 451 aa5.36□□□□□ -1.55
PTPN13-202ENST00000411767 KIF2AO00139 706 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 STIM1Q13586 685 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 MCM10Q7L590 875 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 ZMYND8Q9ULU4 1186 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 PPFIA3O75145 1194 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC152Q4G0S7 254 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 FRAT1Q92837 279 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC68Q9H2F9 335 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 GFAPP14136 432 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 FSD2A1L4K1 749 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 VPS37CA5D8V6 355 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 FMNL1O95466 1100 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 HSPA4P34932 840 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 GTF2A1P52655 376 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 FILIP1Q7Z7B0 1213 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 OPTNQ96CV9 577 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 CRACR2AQ9BSW2 395 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 SPDYE4A6NLX3 237 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 IRX6P78412 446 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 TBC1D10BQ4KMP7 808 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 PDILTQ8N807 584 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC102AQ96A19 550 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 BZW2Q9Y6E2 419 aaKnown RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 USO1O60763 962 aaKnown RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 CEBPZQ03701 1054 aaKnown RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 UBE4AQ14139 1066 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 IPO4Q8TEX9 1081 aaKnown RBP5.35□□□□□ -1.55
PTPN13-202ENST00000411767 VCX3AQ9NNX9 186 aa5.35□□□□□ -1.55
PTPN13-202ENST00000411767 PSMC4P43686 418 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 CTR9Q6PD62 1173 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 SMARCC2Q8TAQ2 1214 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 RASSF4Q9H2L5 321 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 CPLX1O14810 134 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms