RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CCDC69A6NI79 296 aa21.83■■□□□ 1.09
HCG11-201ENST00000411553 MYL6BP14649 208 aa21.83■■□□□ 1.09
HCG11-201ENST00000411553 TSPY26PQ9H489 355 aa21.83■■□□□ 1.09
HCG11-201ENST00000411553 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
HCG11-201ENST00000411553 FIBPO43427 364 aa21.83■■□□□ 1.08
HCG11-201ENST00000411553 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
HCG11-201ENST00000411553 CCP110O43303 1012 aa21.82■■□□□ 1.08
HCG11-201ENST00000411553 PRPF40AO75400 957 aaKnown RBP21.82■■□□□ 1.08
HCG11-201ENST00000411553 STK11IPQ8N1F8 1099 aa21.82■■□□□ 1.08
HCG11-201ENST00000411553 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
HCG11-201ENST00000411553 NBPF1Q3BBV0 1214 aa21.82■■□□□ 1.08
HCG11-201ENST00000411553 SOGA3Q5TF21 947 aa21.81■■□□□ 1.08
HCG11-201ENST00000411553 RBM5P52756 815 aaKnown RBP eCLIP21.81■■□□□ 1.08
HCG11-201ENST00000411553 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
HCG11-201ENST00000411553 RTEL1-TNFRSF6BF6WH68 1400 aa21.81■■□□□ 1.08
HCG11-201ENST00000411553 TRAK2O60296 914 aa21.81■■□□□ 1.08
HCG11-201ENST00000411553 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
HCG11-201ENST00000411553 KIF21BO75037 1637 aa21.8■■□□□ 1.08
HCG11-201ENST00000411553 ANKLE2Q86XL3 938 aa21.8■■□□□ 1.08
HCG11-201ENST00000411553 AEBP1Q8IUX7 1158 aa21.8■■□□□ 1.08
HCG11-201ENST00000411553 PRDM11Q9NQV5 511 aa21.8■■□□□ 1.08
HCG11-201ENST00000411553 STK3Q13188 491 aa21.8■■□□□ 1.08
HCG11-201ENST00000411553 ZNHIT6Q9NWK9 470 aaKnown RBP21.8■■□□□ 1.08
HCG11-201ENST00000411553 CT47B1P0C2W7 299 aaPredicted RBP21.79■■□□□ 1.08
HCG11-201ENST00000411553 NUP133Q8WUM0 1156 aa21.78■■□□□ 1.08
HCG11-201ENST00000411553 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
HCG11-201ENST00000411553 STIM1Q13586 685 aa21.78■■□□□ 1.08
HCG11-201ENST00000411553 PDCL3Q9H2J4 239 aa21.78■■□□□ 1.08
HCG11-201ENST00000411553 VSIG10Q8N0Z9 540 aa21.78■■□□□ 1.08
HCG11-201ENST00000411553 FKBP4Q02790 459 aaKnown RBP eCLIP21.78■■□□□ 1.08
HCG11-201ENST00000411553 ZHX3Q9H4I2 956 aa21.78■■□□□ 1.08
HCG11-201ENST00000411553 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
HCG11-201ENST00000411553 ZNF428Q96B54 188 aa21.77■■□□□ 1.08
HCG11-201ENST00000411553 DACH1Q9UI36 760 aa21.77■■□□□ 1.08
HCG11-201ENST00000411553 NOM1Q5C9Z4 860 aaKnown RBP21.77■■□□□ 1.08
HCG11-201ENST00000411553 MAP4K4O95819 1239 aaPredicted RBP21.76■■□□□ 1.07
HCG11-201ENST00000411553 AACSQ86V21 672 aa21.76■■□□□ 1.07
HCG11-201ENST00000411553 BTBD11A6QL63 1104 aa21.76■■□□□ 1.07
HCG11-201ENST00000411553 NOL7Q9UMY1 257 aaKnown RBP21.76■■□□□ 1.07
HCG11-201ENST00000411553 C9orf84Q5VXU9 1444 aa21.76■■□□□ 1.07
HCG11-201ENST00000411553 BCAR3O75815 825 aa21.75■■□□□ 1.07
HCG11-201ENST00000411553 SERPINC1P01008 464 aa21.75■■□□□ 1.07
HCG11-201ENST00000411553 ME1P48163 572 aa21.75■■□□□ 1.07
HCG11-201ENST00000411553 CEP126Q9P2H0 1117 aa21.75■■□□□ 1.07
HCG11-201ENST00000411553 LUC7LQ9NQ29 371 aaKnown RBP21.74■■□□□ 1.07
HCG11-201ENST00000411553 ATF7IPQ6VMQ6 1270 aa21.74■■□□□ 1.07
HCG11-201ENST00000411553 ZSCAN29Q8IWY8 852 aaPredicted RBP21.74■■□□□ 1.07
HCG11-201ENST00000411553 CDKL5O76039 1030 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 SLC26A8Q96RN1 970 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 CTNNA3Q9UI47 895 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 TDO2P48775 406 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 SKIDA1Q1XH10 827 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 WDR33Q9C0J8 1336 aaKnown RBP21.73■■□□□ 1.07
HCG11-201ENST00000411553 KIAA1107Q9UPP5 1409 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 PPFIBP1Q86W92 1011 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 TANGO6Q9C0B7 1094 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 RAI14Q9P0K7 980 aa21.73■■□□□ 1.07
HCG11-201ENST00000411553 UBAC1Q9BSL1 405 aa21.72■■□□□ 1.07
HCG11-201ENST00000411553 DHX8Q14562 1220 aaKnown RBP21.72■■□□□ 1.07
HCG11-201ENST00000411553 CCDC192P0DO97 292 aa21.72■■□□□ 1.07
HCG11-201ENST00000411553 CFTRP13569 1480 aa21.72■■□□□ 1.07
HCG11-201ENST00000411553 TNMDQ9H2S6 317 aa21.71■■□□□ 1.07
HCG11-201ENST00000411553 DEF6Q9H4E7 631 aa21.71■■□□□ 1.07
HCG11-201ENST00000411553 RPGRIP1LQ68CZ1 1315 aa21.71■■□□□ 1.07
HCG11-201ENST00000411553 ERLIN2O94905 339 aa21.71■■□□□ 1.07
HCG11-201ENST00000411553 KRT85P78386 507 aa21.71■■□□□ 1.07
HCG11-201ENST00000411553 BLOC1S2Q6QNY1 142 aa21.71■■□□□ 1.07
HCG11-201ENST00000411553 LARP1BQ659C4 914 aaKnown RBP21.71■■□□□ 1.07
HCG11-201ENST00000411553 ATAD2Q6PL18 1390 aa21.7■■□□□ 1.06
HCG11-201ENST00000411553 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
HCG11-201ENST00000411553 RRS1Q15050 365 aaKnown RBP21.7■■□□□ 1.06
HCG11-201ENST00000411553 MVPQ14764 893 aaKnown RBP21.7■■□□□ 1.06
HCG11-201ENST00000411553 TXLNBQ8N3L3 684 aa21.7■■□□□ 1.06
HCG11-201ENST00000411553 BMP2KQ9NSY1 1161 aaPredicted RBP21.69■■□□□ 1.06
HCG11-201ENST00000411553 POGZQ7Z3K3 1410 aa21.69■■□□□ 1.06
HCG11-201ENST00000411553 PIP4K2BP78356 416 aa21.69■■□□□ 1.06
HCG11-201ENST00000411553 BICDL1Q6ZP65 573 aa21.69■■□□□ 1.06
HCG11-201ENST00000411553 LRP2BPQ9P2M1 347 aa21.69■■□□□ 1.06
HCG11-201ENST00000411553 CCDC191Q8NCU4 936 aa21.69■■□□□ 1.06
HCG11-201ENST00000411553 ERBINQ96RT1 1412 aa21.68■■□□□ 1.06
HCG11-201ENST00000411553 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
HCG11-201ENST00000411553 CHD1LQ86WJ1 897 aa21.68■■□□□ 1.06
HCG11-201ENST00000411553 PDRG1Q9NUG6 133 aa21.68■■□□□ 1.06
HCG11-201ENST00000411553 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
HCG11-201ENST00000411553 MPHOSPH10O00566 681 aaKnown RBP21.68■■□□□ 1.06
HCG11-201ENST00000411553 SPC24Q8NBT2 197 aa21.68■■□□□ 1.06
HCG11-201ENST00000411553 H0YHG0 523 aa21.68■■□□□ 1.06
HCG11-201ENST00000411553 FCHSD2O94868 740 aa21.67■■□□□ 1.06
HCG11-201ENST00000411553 STARD3NLO95772 234 aa21.67■■□□□ 1.06
HCG11-201ENST00000411553 ZSCAN31Q96LW9 406 aaPredicted RBP21.67■■□□□ 1.06
HCG11-201ENST00000411553 MAP7D2Q96T17 732 aa21.67■■□□□ 1.06
HCG11-201ENST00000411553 SSBP05455 408 aaKnown RBP eCLIP21.66■■□□□ 1.06
HCG11-201ENST00000411553 NEFHP12036 1026 aa21.66■■□□□ 1.06
HCG11-201ENST00000411553 KRT32Q14532 448 aa21.66■■□□□ 1.06
HCG11-201ENST00000411553 XPCQ01831 940 aaPredicted RBP21.66■■□□□ 1.06
HCG11-201ENST00000411553 ZNF76P36508 570 aa21.66■■□□□ 1.06
HCG11-201ENST00000411553 CWC27Q6UX04 472 aaKnown RBP21.66■■□□□ 1.06
HCG11-201ENST00000411553 CWC15Q9P013 229 aaKnown RBP21.66■■□□□ 1.06
HCG11-201ENST00000411553 JAKMIP1Q96N16 626 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms