RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 RGPD8O14715 1765 aaPredicted RBP30.37■■■□□ 2.45
PMS1-205ENST00000409985 PCDHB15Q9Y5E8 787 aa30.36■■■□□ 2.45
PMS1-205ENST00000409985 AATKQ6ZMQ8 1374 aa30.35■■■□□ 2.45
PMS1-205ENST00000409985 PPIP5K1Q6PFW1 1433 aa30.35■■■□□ 2.45
PMS1-205ENST00000409985 RIPK4P57078 832 aa30.35■■■□□ 2.45
PMS1-205ENST00000409985 DAXXQ9UER7 740 aaPredicted RBP30.35■■■□□ 2.45
PMS1-205ENST00000409985 EXOSC9Q06265 439 aaKnown RBP30.34■■■□□ 2.45
PMS1-205ENST00000409985 MSH6P52701 1360 aa30.33■■■□□ 2.45
PMS1-205ENST00000409985 POLKQ9UBT6 870 aa30.33■■■□□ 2.45
PMS1-205ENST00000409985 BRPF1P55201 1214 aaPredicted RBP30.32■■■□□ 2.44
PMS1-205ENST00000409985 ALDH1L2Q3SY69 923 aa30.32■■■□□ 2.44
PMS1-205ENST00000409985 NUDT16Q96DE0 195 aaKnown RBP30.32■■■□□ 2.44
PMS1-205ENST00000409985 FTSJ3Q8IY81 847 aaKnown RBP30.31■■■□□ 2.44
PMS1-205ENST00000409985 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
PMS1-205ENST00000409985 DCCP43146 1447 aa30.31■■■□□ 2.44
PMS1-205ENST00000409985 NEFMP07197 916 aa30.31■■■□□ 2.44
PMS1-205ENST00000409985 RSPH6AQ9H0K4 717 aa30.31■■■□□ 2.44
PMS1-205ENST00000409985 SMC4Q9NTJ3 1288 aa30.31■■■□□ 2.44
PMS1-205ENST00000409985 DDX19BQ9UMR2 479 aa30.31■■■□□ 2.44
PMS1-205ENST00000409985 KIF16BQ96L93 1317 aa30.3■■■□□ 2.44
PMS1-205ENST00000409985 CALD1Q05682 793 aaKnown RBP30.3■■■□□ 2.44
PMS1-205ENST00000409985 TSR2Q969E8 191 aaKnown RBP30.3■■■□□ 2.44
PMS1-205ENST00000409985 BCL2L13Q9BXK5 485 aa30.3■■■□□ 2.44
PMS1-205ENST00000409985 MST1RQ04912 1400 aa30.29■■■□□ 2.44
PMS1-205ENST00000409985 MON2Q7Z3U7 1717 aa30.29■■■□□ 2.44
PMS1-205ENST00000409985 IPO8O15397 1037 aaKnown RBP30.29■■■□□ 2.44
PMS1-205ENST00000409985 ATF7IPQ6VMQ6 1270 aa30.29■■■□□ 2.44
PMS1-205ENST00000409985 HDAC1Q13547 482 aaPredicted RBP30.28■■■□□ 2.44
PMS1-205ENST00000409985 TNNQ9UQP3 1299 aa30.28■■■□□ 2.44
PMS1-205ENST00000409985 TOPAZ1Q8N9V7 1692 aa30.28■■■□□ 2.44
PMS1-205ENST00000409985 MAP2P11137 1827 aaKnown RBP30.28■■■□□ 2.44
PMS1-205ENST00000409985 SSH1Q8WYL5 1049 aa30.27■■■□□ 2.44
PMS1-205ENST00000409985 ATF3P18847 181 aa30.26■■■□□ 2.43
PMS1-205ENST00000409985 TRIM27P14373 513 aa30.25■■■□□ 2.43
PMS1-205ENST00000409985 PDZRN3Q9UPQ7 1066 aa30.25■■■□□ 2.43
PMS1-205ENST00000409985 USP19O94966 1318 aa30.25■■■□□ 2.43
PMS1-205ENST00000409985 C1orf167Q5SNV9 1468 aa30.25■■■□□ 2.43
PMS1-205ENST00000409985 LAS1LQ9Y4W2 734 aaKnown RBP30.25■■■□□ 2.43
PMS1-205ENST00000409985 CCDC61Q9Y6R9 512 aa30.25■■■□□ 2.43
PMS1-205ENST00000409985 AKAP12Q02952 1782 aa30.24■■■□□ 2.43
PMS1-205ENST00000409985 ANKARQ7Z5J8 1434 aa30.24■■■□□ 2.43
PMS1-205ENST00000409985 CADPS2Q86UW7 1296 aa30.24■■■□□ 2.43
PMS1-205ENST00000409985 ORAI2Q96SN7 254 aa30.23■■■□□ 2.43
PMS1-205ENST00000409985 ZNF692Q9BU19 519 aaPredicted RBP30.23■■■□□ 2.43
PMS1-205ENST00000409985 NFE2L2Q16236 605 aa30.23■■■□□ 2.43
PMS1-205ENST00000409985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.22■■■□□ 2.43
PMS1-205ENST00000409985 PRKAR2BP31323 418 aa30.21■■■□□ 2.43
PMS1-205ENST00000409985 BCL11AQ9H165 835 aa30.21■■■□□ 2.43
PMS1-205ENST00000409985 IL13P35225 146 aa30.2■■■□□ 2.42
PMS1-205ENST00000409985 CERKQ8TCT0 537 aa30.2■■■□□ 2.42
PMS1-205ENST00000409985 CHMP4BQ9H444 224 aaKnown RBP30.19■■■□□ 2.42
PMS1-205ENST00000409985 ITSN1Q15811 1721 aa30.18■■■□□ 2.42
PMS1-205ENST00000409985 SLAIN2Q9P270 581 aa30.18■■■□□ 2.42
PMS1-205ENST00000409985 NOB1Q9ULX3 412 aaKnown RBP30.18■■■□□ 2.42
PMS1-205ENST00000409985 ARHGAP45Q92619 1136 aa30.17■■■□□ 2.42
PMS1-205ENST00000409985 LMOD3Q0VAK6 560 aa30.16■■■□□ 2.42
PMS1-205ENST00000409985 ESCO1Q5FWF5 840 aa30.16■■■□□ 2.42
PMS1-205ENST00000409985 PLEKHG3A1L390 1219 aa30.16■■■□□ 2.42
PMS1-205ENST00000409985 UPF2Q9HAU5 1272 aaKnown RBP30.16■■■□□ 2.42
PMS1-205ENST00000409985 COG3Q96JB2 828 aa30.15■■■□□ 2.42
PMS1-205ENST00000409985 IFT57Q9NWB7 429 aa30.15■■■□□ 2.42
PMS1-205ENST00000409985 GNAI1P63096 354 aa30.14■■■□□ 2.42
PMS1-205ENST00000409985 SMC5Q8IY18 1101 aa30.14■■■□□ 2.42
PMS1-205ENST00000409985 ZBTB40Q9NUA8 1239 aa30.14■■■□□ 2.42
PMS1-205ENST00000409985 BECN1Q14457 450 aa30.14■■■□□ 2.42
PMS1-205ENST00000409985 ACEP12821 1306 aa30.13■■■□□ 2.41
PMS1-205ENST00000409985 ZNF853P0CG23 659 aa30.12■■■□□ 2.41
PMS1-205ENST00000409985 ITPRIPQ8IWB1 547 aa30.12■■■□□ 2.41
PMS1-205ENST00000409985 PHF8Q9UPP1 1060 aa30.12■■■□□ 2.41
PMS1-205ENST00000409985 NRKQ7Z2Y5 1582 aa30.11■■■□□ 2.41
PMS1-205ENST00000409985 BRINP3Q76B58 766 aa30.11■■■□□ 2.41
PMS1-205ENST00000409985 NME9Q86XW9 330 aa30.11■■■□□ 2.41
PMS1-205ENST00000409985 NFKBIBQ15653 356 aa30.1■■■□□ 2.41
PMS1-205ENST00000409985 TMEM57Q8N5G2 664 aa30.1■■■□□ 2.41
PMS1-205ENST00000409985 DDX17Q92841 729 aaKnown RBP30.1■■■□□ 2.41
PMS1-205ENST00000409985 SEC24BO95487 1268 aa30.09■■■□□ 2.41
PMS1-205ENST00000409985 EMILIN1Q9Y6C2 1016 aa30.09■■■□□ 2.41
PMS1-205ENST00000409985 TBC1D32Q96NH3 1257 aa30.08■■■□□ 2.41
PMS1-205ENST00000409985 SLC4A3P48751 1232 aa30.08■■■□□ 2.41
PMS1-205ENST00000409985 PHACTR3Q96KR7 559 aa30.08■■■□□ 2.41
PMS1-205ENST00000409985 FOXO3O43524 673 aa30.06■■■□□ 2.4
PMS1-205ENST00000409985 VAMP4O75379 141 aa30.06■■■□□ 2.4
PMS1-205ENST00000409985 NGDNQ8NEJ9 315 aaKnown RBP30.04■■■□□ 2.4
PMS1-205ENST00000409985 CFAP44Q96MT7 982 aa30.04■■■□□ 2.4
PMS1-205ENST00000409985 KIF1AQ12756 1690 aa30.03■■■□□ 2.4
PMS1-205ENST00000409985 ROBO1Q9Y6N7 1651 aa30.03■■■□□ 2.4
PMS1-205ENST00000409985 MRPL50Q8N5N7 158 aaKnown RBP30.03■■■□□ 2.4
PMS1-205ENST00000409985 UBAP1LF5GYI3 381 aa30.02■■■□□ 2.4
PMS1-205ENST00000409985 HMOX1P09601 288 aa30.02■■■□□ 2.4
PMS1-205ENST00000409985 XPCQ01831 940 aaPredicted RBP30.02■■■□□ 2.4
PMS1-205ENST00000409985 USP6P35125 1406 aa30.02■■■□□ 2.4
PMS1-205ENST00000409985 FBLN1P23142 703 aa30.02■■■□□ 2.4
PMS1-205ENST00000409985 SSH2Q76I76 1423 aa30.01■■■□□ 2.4
PMS1-205ENST00000409985 DLG5Q8TDM6 1919 aa30.01■■■□□ 2.39
PMS1-205ENST00000409985 KIF24Q5T7B8 1368 aa30.01■■■□□ 2.39
PMS1-205ENST00000409985 TOM1O60784 492 aa29.99■■■□□ 2.39
PMS1-205ENST00000409985 OVOS2A0A0J9YW53 1432 aa29.98■■■□□ 2.39
PMS1-205ENST00000409985 OVOS2Q6IE36 1432 aa29.98■■■□□ 2.39
PMS1-205ENST00000409985 HAP1P54257 671 aaPredicted RBP29.98■■■□□ 2.39
PMS1-205ENST00000409985 NUCB1Q02818 461 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms