RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PDE3AQ14432 1141 aa25.46■■□□□ 1.67
LIMS2-207ENST00000409808 USP31Q70CQ4 1352 aa25.46■■□□□ 1.67
LIMS2-207ENST00000409808 HMOX1P09601 288 aa25.45■■□□□ 1.66
LIMS2-207ENST00000409808 TMEM94Q12767 1356 aa25.45■■□□□ 1.66
LIMS2-207ENST00000409808 ABTB2Q8N961 1025 aa25.44■■□□□ 1.66
LIMS2-207ENST00000409808 C19orf44Q9H6X5 657 aa25.44■■□□□ 1.66
LIMS2-207ENST00000409808 PEAK1Q9H792 1746 aa25.43■■□□□ 1.66
LIMS2-207ENST00000409808 XPCQ01831 940 aaPredicted RBP25.43■■□□□ 1.66
LIMS2-207ENST00000409808 PSME1Q06323 249 aa25.42■■□□□ 1.66
LIMS2-207ENST00000409808 FOXO3O43524 673 aa25.42■■□□□ 1.66
LIMS2-207ENST00000409808 MARF1Q9Y4F3 1742 aaKnown RBP25.41■■□□□ 1.66
LIMS2-207ENST00000409808 SKAP1Q86WV1 359 aa25.41■■□□□ 1.66
LIMS2-207ENST00000409808 RSPH6AQ9H0K4 717 aa25.41■■□□□ 1.66
LIMS2-207ENST00000409808 LRRC7Q96NW7 1537 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 MAPK8IP3Q9UPT6 1336 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 NEFMP07197 916 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 PRKAR2BP31323 418 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 AAMPQ13685 434 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
LIMS2-207ENST00000409808 HSP90AB2PQ58FF8 381 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 PHF23Q9BUL5 403 aaPredicted RBP25.4■■□□□ 1.66
LIMS2-207ENST00000409808 MAP3K19Q56UN5 1328 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 C8orf34Q49A92 452 aa25.4■■□□□ 1.66
LIMS2-207ENST00000409808 FCHSD2O94868 740 aa25.39■■□□□ 1.66
LIMS2-207ENST00000409808 TMPOP42166 694 aaKnown RBP25.39■■□□□ 1.66
LIMS2-207ENST00000409808 BCAR3O75815 825 aa25.38■■□□□ 1.65
LIMS2-207ENST00000409808 EIF4A2Q14240 407 aaKnown RBP25.38■■□□□ 1.65
LIMS2-207ENST00000409808 C1orf167Q5SNV9 1468 aa25.37■■□□□ 1.65
LIMS2-207ENST00000409808 LAS1LQ9Y4W2 734 aaKnown RBP25.37■■□□□ 1.65
LIMS2-207ENST00000409808 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
LIMS2-207ENST00000409808 DAXXQ9UER7 740 aaPredicted RBP25.36■■□□□ 1.65
LIMS2-207ENST00000409808 ATF3P18847 181 aa25.36■■□□□ 1.65
LIMS2-207ENST00000409808 CCDC27Q2M243 656 aa25.35■■□□□ 1.65
LIMS2-207ENST00000409808 PLEKHG5O94827 1062 aa25.34■■□□□ 1.65
LIMS2-207ENST00000409808 WDR63Q8IWG1 891 aa25.34■■□□□ 1.65
LIMS2-207ENST00000409808 TRIM35Q9UPQ4 493 aa25.34■■□□□ 1.65
LIMS2-207ENST00000409808 RIPK4P57078 832 aa25.34■■□□□ 1.65
LIMS2-207ENST00000409808 PNNQ9H307 717 aaKnown RBP25.34■■□□□ 1.65
LIMS2-207ENST00000409808 ZNF335Q9H4Z2 1342 aaPredicted RBP25.33■■□□□ 1.65
LIMS2-207ENST00000409808 AMPHP49418 695 aa25.32■■□□□ 1.64
LIMS2-207ENST00000409808 AEBP1Q8IUX7 1158 aa25.32■■□□□ 1.64
LIMS2-207ENST00000409808 XIRP1Q702N8 1843 aaKnown RBP25.32■■□□□ 1.64
LIMS2-207ENST00000409808 MST1RQ04912 1400 aa25.31■■□□□ 1.64
LIMS2-207ENST00000409808 USP54Q70EL1 1684 aa25.31■■□□□ 1.64
LIMS2-207ENST00000409808 DDX17Q92841 729 aaKnown RBP25.31■■□□□ 1.64
LIMS2-207ENST00000409808 SBNO1A3KN83 1393 aa25.3■■□□□ 1.64
LIMS2-207ENST00000409808 CLUAP1Q96AJ1 413 aa25.3■■□□□ 1.64
LIMS2-207ENST00000409808 LMOD2Q6P5Q4 547 aa25.29■■□□□ 1.64
LIMS2-207ENST00000409808 KRT28Q7Z3Y7 464 aa25.29■■□□□ 1.64
LIMS2-207ENST00000409808 FLT4P35916 1363 aa25.29■■□□□ 1.64
LIMS2-207ENST00000409808 CANXP27824 592 aaKnown RBP25.29■■□□□ 1.64
LIMS2-207ENST00000409808 SULT6B1Q6IMI4 303 aa25.29■■□□□ 1.64
LIMS2-207ENST00000409808 RGS3P49796 1198 aa25.28■■□□□ 1.64
LIMS2-207ENST00000409808 NCOA3Q9Y6Q9 1424 aa25.27■■□□□ 1.64
LIMS2-207ENST00000409808 MSH6P52701 1360 aa25.26■■□□□ 1.63
LIMS2-207ENST00000409808 IGHDP01880 384 aa25.25■■□□□ 1.63
LIMS2-207ENST00000409808 KIF1AQ12756 1690 aa25.25■■□□□ 1.63
LIMS2-207ENST00000409808 DCCP43146 1447 aa25.25■■□□□ 1.63
LIMS2-207ENST00000409808 HOXC9P31274 260 aa25.25■■□□□ 1.63
LIMS2-207ENST00000409808 NFE2L2Q16236 605 aa25.25■■□□□ 1.63
LIMS2-207ENST00000409808 CADPS2Q86UW7 1296 aa25.25■■□□□ 1.63
LIMS2-207ENST00000409808 RARSP54136 660 aaKnown RBP25.24■■□□□ 1.63
LIMS2-207ENST00000409808 RGPD1P0DJD0 1748 aa25.24■■□□□ 1.63
LIMS2-207ENST00000409808 TRPM3Q9HCF6 1732 aaPredicted RBP25.24■■□□□ 1.63
LIMS2-207ENST00000409808 TSR2Q969E8 191 aaKnown RBP25.24■■□□□ 1.63
LIMS2-207ENST00000409808 ZBTB7CA1YPR0 619 aa25.23■■□□□ 1.63
LIMS2-207ENST00000409808 LTN1O94822 1766 aa25.23■■□□□ 1.63
LIMS2-207ENST00000409808 LTV1Q96GA3 475 aaPredicted RBP25.22■■□□□ 1.63
LIMS2-207ENST00000409808 THUMPD2Q9BTF0 503 aaKnown RBP25.21■■□□□ 1.63
LIMS2-207ENST00000409808 DLG5Q8TDM6 1919 aa25.21■■□□□ 1.63
LIMS2-207ENST00000409808 NFAT5O94916 1531 aa25.21■■□□□ 1.63
LIMS2-207ENST00000409808 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.63
LIMS2-207ENST00000409808 COG6Q9Y2V7 657 aa25.2■■□□□ 1.63
LIMS2-207ENST00000409808 PANK1Q8TE04 598 aa25.2■■□□□ 1.62
LIMS2-207ENST00000409808 EYA1Q99502 592 aa25.2■■□□□ 1.62
LIMS2-207ENST00000409808 NFKBIBQ15653 356 aa25.19■■□□□ 1.62
LIMS2-207ENST00000409808 CT47B1P0C2W7 299 aaPredicted RBP25.18■■□□□ 1.62
LIMS2-207ENST00000409808 GCP02774 474 aa25.17■■□□□ 1.62
LIMS2-207ENST00000409808 FAM83GA6ND36 823 aa25.17■■□□□ 1.62
LIMS2-207ENST00000409808 ARHGEF10O15013 1369 aa25.16■■□□□ 1.62
LIMS2-207ENST00000409808 KCNH5Q8NCM2 988 aa25.16■■□□□ 1.62
LIMS2-207ENST00000409808 FRAT1Q92837 279 aaPredicted RBP25.16■■□□□ 1.62
LIMS2-207ENST00000409808 VIRMAQ69YN4 1812 aaKnown RBP25.16■■□□□ 1.62
LIMS2-207ENST00000409808 KIF24Q5T7B8 1368 aa25.15■■□□□ 1.62
LIMS2-207ENST00000409808 DCTN1Q14203 1278 aa25.14■■□□□ 1.62
LIMS2-207ENST00000409808 IGSF1Q8N6C5 1336 aa25.14■■□□□ 1.61
LIMS2-207ENST00000409808 IP6K1Q92551 441 aa25.14■■□□□ 1.61
LIMS2-207ENST00000409808 IL16Q14005 1332 aa25.13■■□□□ 1.61
LIMS2-207ENST00000409808 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
LIMS2-207ENST00000409808 SLC4A3P48751 1232 aa25.13■■□□□ 1.61
LIMS2-207ENST00000409808 EXOSC9Q06265 439 aaKnown RBP25.13■■□□□ 1.61
LIMS2-207ENST00000409808 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
LIMS2-207ENST00000409808 SLIT3O75094 1523 aa25.12■■□□□ 1.61
LIMS2-207ENST00000409808 USHBP1Q8N6Y0 703 aa25.12■■□□□ 1.61
LIMS2-207ENST00000409808 USP19O94966 1318 aa25.11■■□□□ 1.61
LIMS2-207ENST00000409808 NPHP3Q7Z494 1330 aa25.11■■□□□ 1.61
LIMS2-207ENST00000409808 GSE1Q14687 1217 aa25.11■■□□□ 1.61
LIMS2-207ENST00000409808 BCL2L13Q9BXK5 485 aa25.11■■□□□ 1.61
LIMS2-207ENST00000409808 RWDD1Q9H446 243 aaPredicted RBP25.11■■□□□ 1.61
LIMS2-207ENST00000409808 RTL1A6NKG5 1358 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms