RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 USP47Q96K76 1375 aa9.99□□□□□ -0.81
SCN9A-203ENST00000409672 BAZ1AQ9NRL2 1556 aaPredicted RBP9.99□□□□□ -0.81
SCN9A-203ENST00000409672 RRP1P56182 461 aaKnown RBP9.98□□□□□ -0.81
SCN9A-203ENST00000409672 C6orf229H3BNL8 230 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 TSR2Q969E8 191 aaKnown RBP9.98□□□□□ -0.81
SCN9A-203ENST00000409672 PSMA5P28066 241 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
SCN9A-203ENST00000409672 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 PDE4AP27815 886 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 AFAP1Q8N556 730 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 BCAR3O75815 825 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 MKNK2Q9HBH9 465 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 FIBPO43427 364 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 GPTP24298 496 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 CHMP5Q9NZZ3 219 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 F8W031 263 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-203ENST00000409672 VAT1LQ9HCJ6 419 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 HMGN5P82970 282 aaKnown RBP9.98□□□□□ -0.81
SCN9A-203ENST00000409672 FILIP1LQ4L180 1135 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 TEX35Q5T0J7 233 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 ZNF354CQ86Y25 554 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 COMMD10Q9Y6G5 202 aa9.98□□□□□ -0.81
SCN9A-203ENST00000409672 SERPINC1P01008 464 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 ANAPC15P60006 121 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 AXDND1Q5T1B0 1012 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-203ENST00000409672 BIN2Q9UBW5 565 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-203ENST00000409672 DNA2P51530 1060 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 CDR1P51861 262 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-203ENST00000409672 TRIM5Q9C035 493 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
SCN9A-203ENST00000409672 ANKLE2Q86XL3 938 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 NACAP1Q9BZK3 213 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
SCN9A-203ENST00000409672 STK38Q15208 465 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 AACSQ86V21 672 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
SCN9A-203ENST00000409672 NOB1Q9ULX3 412 aaKnown RBP9.97□□□□□ -0.81
SCN9A-203ENST00000409672 MIA2Q96PC5 1412 aa9.96□□□□□ -0.81
SCN9A-203ENST00000409672 KINO60870 393 aaKnown RBP9.96□□□□□ -0.81
SCN9A-203ENST00000409672 DZIP1Q86YF9 867 aaKnown RBP9.96□□□□□ -0.81
SCN9A-203ENST00000409672 FEZ1Q99689 392 aa9.96□□□□□ -0.81
SCN9A-203ENST00000409672 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.96□□□□□ -0.81
SCN9A-203ENST00000409672 H0YHG0 523 aa9.96□□□□□ -0.81
SCN9A-203ENST00000409672 CWC27Q6UX04 472 aaKnown RBP9.96□□□□□ -0.81
SCN9A-203ENST00000409672 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.81
SCN9A-203ENST00000409672 MYO6Q9UM54 1294 aa9.96□□□□□ -0.81
SCN9A-203ENST00000409672 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
SCN9A-203ENST00000409672 PLS1Q14651 629 aa9.96□□□□□ -0.82
SCN9A-203ENST00000409672 RAPGEF3O95398 923 aa9.96□□□□□ -0.82
SCN9A-203ENST00000409672 TMOD3Q9NYL9 352 aa9.96□□□□□ -0.82
SCN9A-203ENST00000409672 ME1P48163 572 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 NEK4P51957 841 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 SMARCE1Q969G3 411 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 MMRN2Q9H8L6 949 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 ZNF408Q9H9D4 720 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 MACROD2A1Z1Q3 448 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 C11orf95C9JLR9 678 aaPredicted RBP9.95□□□□□ -0.82
SCN9A-203ENST00000409672 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 HSP90B2PQ58FF3 399 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
SCN9A-203ENST00000409672 THEMISQ8N1K5 641 aaPredicted RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 C8orf37Q96NL8 207 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 IL1RAPL2Q9NP60 686 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 LRRFIP2Q9Y608 721 aaKnown RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 TRIM21P19474 475 aaKnown RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 ZRSR2Q15696 482 aaKnown RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 TRIM22Q8IYM9 498 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 ZMYND15Q9H091 742 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 TMX1Q9H3N1 280 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 SAMM50Q9Y512 469 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 TSPYL1Q9H0U9 437 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 GNAI2P04899 355 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 CAVIN1Q6NZI2 390 aaKnown RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 DDX11Q96FC9 970 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 STARD3NLO95772 234 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 PPP4R3AQ6IN85 833 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 JARID2Q92833 1246 aaPredicted RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 EP400NLQ6ZTU2 488 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
SCN9A-203ENST00000409672 C22orf23Q9BZE7 217 aa9.94□□□□□ -0.82
SCN9A-203ENST00000409672 DESP17661 470 aa9.93□□□□□ -0.82
SCN9A-203ENST00000409672 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-203ENST00000409672 GUCY1B3Q02153 619 aa9.93□□□□□ -0.82
SCN9A-203ENST00000409672 ZNHIT6Q9NWK9 470 aaKnown RBP9.93□□□□□ -0.82
SCN9A-203ENST00000409672 PUF60Q9UHX1 559 aaKnown RBP9.93□□□□□ -0.82
SCN9A-203ENST00000409672 SPTY2D1Q68D10 685 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-203ENST00000409672 CTNNBL1Q8WYA6 563 aaPredicted RBP9.93□□□□□ -0.82
SCN9A-203ENST00000409672 PHLDB1Q86UU1 1377 aa9.93□□□□□ -0.82
SCN9A-203ENST00000409672 RANBP6O60518 1105 aaKnown RBP9.93□□□□□ -0.82
SCN9A-203ENST00000409672 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
SCN9A-203ENST00000409672 TERF1P54274 439 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 CAVIN4Q5BKX8 364 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 PPFIA3O75145 1194 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 DPH6Q7L8W6 267 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
SCN9A-203ENST00000409672 TNIP1Q15025 636 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms