RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SURF6O75683 361 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 SRCIN1Q9C0H9 1055 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 ZNF622Q969S3 477 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NACAP1Q9BZK3 213 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 EIF4G3O43432 1585 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NCOA1Q15788 1441 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ADAMTS12P58397 1594 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 GNAI2P04899 355 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 CCT4P50991 539 aaKnown RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 TEX13AQ9BXU3 409 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 RRP1P56182 461 aaKnown RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 NME9Q86XW9 330 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 RAI14Q9P0K7 980 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 HIP1O00291 1037 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 CHRNA2Q15822 529 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ATP6V1DQ9Y5K8 247 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 FOXD4L5Q5VV16 416 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ANKRD24Q8TF21 1146 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 FOXD4L4Q8WXT5 416 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ZNF428Q96B54 188 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 MPHOSPH10O00566 681 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 RRP12Q5JTH9 1297 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 BRD4O60885 1362 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 INTS3Q68E01 1043 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 SIL1Q9H173 461 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ADAMTS8Q9UP79 889 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ABCC2Q92887 1545 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 FCHSD2O94868 740 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 EXOSC9Q06265 439 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 CAVIN4Q5BKX8 364 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 IFNL2Q8IZJ0 200 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 C19orf44Q9H6X5 657 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ATP10BO94823 1461 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ADGRF5Q8IZF2 1346 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 HOOK1Q9UJC3 728 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 DDB1Q16531 1140 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ACSBG1Q96GR2 724 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 DUOX2Q9NRD8 1548 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 SMARCC1Q92922 1105 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ABCC10Q5T3U5 1492 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ZMYM3Q14202 1370 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 PSMA5P28066 241 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 FMNL2Q96PY5 1086 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ZBED9Q6R2W3 1325 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 TRMT112Q9UI30 125 aaKnown RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 FAM161AQ3B820 660 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 PCMTD1Q96MG8 357 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 STK32BQ9NY57 414 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 CLEC11AQ9Y240 323 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ACEP12821 1306 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 NAIPQ13075 1403 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 CCDC85AQ96PX6 553 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 SLKQ9H2G2 1235 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 TPM3P06753 285 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 NFE2L2Q16236 605 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 CEP126Q9P2H0 1117 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 ATP6V1AP38606 617 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 FOSBP53539 338 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 AAMPQ13685 434 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 CRACR2BQ8N4Y2 399 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 ZCRB1Q8TBF4 217 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 C14orf93Q9H972 538 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 THOC2Q8NI27 1593 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 METTL24Q5JXM2 366 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 SLF2Q8IX21 1173 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 SPINK5Q9NQ38 1064 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TTC21BQ7Z4L5 1316 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 ATP10AO60312 1499 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 KIAA0556O60303 1618 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TAF7Q15545 349 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 PPP1R42Q7Z4L9 355 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 STK11IPQ8N1F8 1099 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 MYD88Q99836 296 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TFCP2L1Q9NZI6 479 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 SYCP2Q9BX26 1530 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 KDM4AO75164 1064 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TPM1P09493 284 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 NOB1Q9ULX3 412 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 FKBP4Q02790 459 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 ANKRD20A12PQ8NF67 263 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 ITSN2Q9NZM3 1697 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 C6orf229H3BNL8 230 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 TTC21AQ8NDW8 1320 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 AKAP2Q9Y2D5 859 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 CDK5RAP3Q96JB5 506 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 MYO1BO43795 1136 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 MSNP26038 577 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 USP5P45974 858 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 SOGA3Q5TF21 947 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms