RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 PPM1GO15355 546 aaPredicted RBP5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 TCP11L2Q8N4U5 519 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 RUNDC1Q96C34 613 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 AMOTL2Q9Y2J4 779 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 SLFN5Q08AF3 891 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 CCDC136Q96JN2 1154 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 TMEM106CQ9BVX2 250 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 FAM135BQ49AJ0 1406 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 PPIP5K1Q6PFW1 1433 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 SETD1AO15047 1707 aaKnown RBP5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 GTPBP6O43824 516 aaPredicted RBP5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 PSEN1P49768 467 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 SCUBE2Q9NQ36 999 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 TBX22Q9Y458 520 aa5.22□□□□□ -1.57
LRRTM4-201ENST00000409088 C3P01024 1663 aa5.21□□□□□ -1.57
LRRTM4-201ENST00000409088 NME9Q86XW9 330 aa5.21□□□□□ -1.57
LRRTM4-201ENST00000409088 EXOC6Q8TAG9 804 aa5.21□□□□□ -1.57
LRRTM4-201ENST00000409088 TECPR2O15040 1411 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 USP32Q8NFA0 1604 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 WWC1Q8IX03 1113 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 NGEFQ8N5V2 710 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 PRR36Q9H6K5 1346 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 E9PSI1 815 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 POTEB2H3BUK9 544 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 POTEJP0CG39 1038 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 PTPRUQ92729 1446 aa5.21□□□□□ -1.58
LRRTM4-201ENST00000409088 FER1L4A9Z1Z3 1794 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 DIAPH1O60610 1272 aaKnown RBP5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 MFSD10Q14728 455 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 ATP7BP35670 1465 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 TRMT2AQ8IZ69 625 aaKnown RBP5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 POLKQ9UBT6 870 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 TRIM35Q9UPQ4 493 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 TRPC6Q9Y210 931 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 ARHGAP23Q9P227 1491 aa5.2□□□□□ -1.58
LRRTM4-201ENST00000409088 NLRP6P59044 892 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 COG3Q96JB2 828 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 CPSF1Q10570 1443 aaKnown RBP5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 ACEP12821 1306 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 ANKLE2Q86XL3 938 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 PMFBP1Q8TBY8 1022 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 CIZ1Q9ULV3 898 aaPredicted RBP5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 EMILIN1Q9Y6C2 1016 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 SLIT1O75093 1534 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 MED14O60244 1454 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 EDC4Q6P2E9 1401 aaKnown RBP5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 KCNA6P17658 529 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 C20orf194Q5TEA3 1177 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 FBXO22Q8NEZ5 403 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 CPS1P31327 1500 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 MAPK8IP3Q9UPT6 1336 aa5.19□□□□□ -1.58
LRRTM4-201ENST00000409088 RRS1Q15050 365 aaKnown RBP5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 PDCD7Q8N8D1 485 aaKnown RBP5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 CRBNQ96SW2 442 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 SNPHO15079 494 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 BCAR3O75815 825 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 SHPRHQ149N8 1683 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 TTC21BQ7Z4L5 1316 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 PLEKHG3A1L390 1219 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 TMPOP42166 694 aaKnown RBP5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 WDR63Q8IWG1 891 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 NGDNQ8NEJ9 315 aaKnown RBP5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 RBM33Q96EV2 1170 aaKnown RBP5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 PLEKHF1Q96S99 279 aa5.18□□□□□ -1.58
LRRTM4-201ENST00000409088 NKTRP30414 1462 aaKnown RBP5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 HMOX1P09601 288 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 PLCG2P16885 1265 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 KNDC1Q76NI1 1749 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 PNPLA6Q8IY17 1366 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 NEFMP07197 916 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 RIPK4P57078 832 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 CCDC27Q2M243 656 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 PNNQ9H307 717 aaKnown RBP5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 RBM19Q9Y4C8 960 aaKnown RBP5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 RIMS1Q86UR5 1692 aaKnown RBP5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 PRKAR2BP31323 418 aa5.17□□□□□ -1.58
LRRTM4-201ENST00000409088 FCHSD2O94868 740 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 PYGBP11216 843 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 COL3A1P02461 1466 aaPredicted RBP5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 CDC42BPGQ6DT37 1551 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 CEP170BQ9Y4F5 1589 aaPredicted RBP5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 CANXP27824 592 aaKnown RBP5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 ZFP91Q96JP5 570 aaPredicted RBP5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 MYH16Q9H6N6 1097 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 IQSEC2Q5JU85 1478 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 IL13P35225 146 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 FRAT1Q92837 279 aaPredicted RBP5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 RSPH6AQ9H0K4 717 aa5.16□□□□□ -1.58
LRRTM4-201ENST00000409088 PTCH1Q13635 1447 aa5.15□□□□□ -1.58
LRRTM4-201ENST00000409088 AATKQ6ZMQ8 1374 aa5.15□□□□□ -1.58
LRRTM4-201ENST00000409088 KIF20BQ96Q89 1820 aa5.15□□□□□ -1.58
LRRTM4-201ENST00000409088 TSR2Q969E8 191 aaKnown RBP5.15□□□□□ -1.58
LRRTM4-201ENST00000409088 PHACTR3Q96KR7 559 aa5.15□□□□□ -1.58
LRRTM4-201ENST00000409088 BCL2L13Q9BXK5 485 aa5.15□□□□□ -1.58
LRRTM4-201ENST00000409088 ANKRD26Q9UPS8 1709 aa5.15□□□□□ -1.59
LRRTM4-201ENST00000409088 PIK3R4Q99570 1358 aa5.15□□□□□ -1.59
LRRTM4-201ENST00000409088 USP6P35125 1406 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms