RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
SNX13-201ENST00000409076 ZBTB9Q96C00 473 aa10.21□□□□□ -0.77
SNX13-201ENST00000409076 TCEANC2Q96MN5 208 aa10.21□□□□□ -0.77
SNX13-201ENST00000409076 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.78
SNX13-201ENST00000409076 PTPRTO14522 1441 aa10.21□□□□□ -0.78
SNX13-201ENST00000409076 FANCAO15360 1455 aa10.21□□□□□ -0.78
SNX13-201ENST00000409076 SDSP20132 328 aa10.21□□□□□ -0.78
SNX13-201ENST00000409076 PRIM1P49642 420 aaKnown RBP10.21□□□□□ -0.78
SNX13-201ENST00000409076 VAMP4O75379 141 aa10.2□□□□□ -0.78
SNX13-201ENST00000409076 GSPT1P15170 499 aaKnown RBP10.2□□□□□ -0.78
SNX13-201ENST00000409076 NFE2L2Q16236 605 aa10.2□□□□□ -0.78
SNX13-201ENST00000409076 POLR3AO14802 1390 aaPredicted RBP10.2□□□□□ -0.78
SNX13-201ENST00000409076 PRDM15P57071 1507 aaPredicted RBP10.2□□□□□ -0.78
SNX13-201ENST00000409076 VPS37CA5D8V6 355 aaPredicted RBP10.2□□□□□ -0.78
SNX13-201ENST00000409076 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
SNX13-201ENST00000409076 AIMP1Q12904 312 aaKnown RBP10.2□□□□□ -0.78
SNX13-201ENST00000409076 FERMT3Q86UX7 667 aa10.2□□□□□ -0.78
SNX13-201ENST00000409076 SIRT2Q8IXJ6 389 aa10.2□□□□□ -0.78
SNX13-201ENST00000409076 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
SNX13-201ENST00000409076 NSFL1CQ9UNZ2 370 aaKnown RBP10.2□□□□□ -0.78
SNX13-201ENST00000409076 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
SNX13-201ENST00000409076 STK31Q9BXU1 1019 aa10.19□□□□□ -0.78
SNX13-201ENST00000409076 ZNF330Q9Y3S2 320 aaPredicted RBP10.19□□□□□ -0.78
SNX13-201ENST00000409076 PLCH2O75038 1416 aa10.19□□□□□ -0.78
SNX13-201ENST00000409076 ZBTB7BO15156 539 aaPredicted RBP10.19□□□□□ -0.78
SNX13-201ENST00000409076 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
SNX13-201ENST00000409076 MRPL50Q8N5N7 158 aaKnown RBP10.19□□□□□ -0.78
SNX13-201ENST00000409076 NUP160Q12769 1436 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 ABCA8O94911 1581 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 DUOX2Q9NRD8 1548 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 IGSF3O75054 1194 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 STK3Q13188 491 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 DRC7Q8IY82 874 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 CEBPZQ03701 1054 aaKnown RBP10.18□□□□□ -0.78
SNX13-201ENST00000409076 HDAC1Q13547 482 aaPredicted RBP10.18□□□□□ -0.78
SNX13-201ENST00000409076 API5Q9BZZ5 524 aaKnown RBP10.18□□□□□ -0.78
SNX13-201ENST00000409076 MAST1Q9Y2H9 1570 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 CDC42BPBQ9Y5S2 1711 aa10.18□□□□□ -0.78
SNX13-201ENST00000409076 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
SNX13-201ENST00000409076 SIL1Q9H173 461 aa10.17□□□□□ -0.78
SNX13-201ENST00000409076 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
SNX13-201ENST00000409076 SURF6O75683 361 aaKnown RBP10.17□□□□□ -0.78
SNX13-201ENST00000409076 ZSCAN23Q3MJ62 389 aa10.17□□□□□ -0.78
SNX13-201ENST00000409076 CROCC2H7BZ55 1655 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 CEBPAP49715 358 aaPredicted RBP10.16□□□□□ -0.78
SNX13-201ENST00000409076 CWC27Q6UX04 472 aaKnown RBP10.16□□□□□ -0.78
SNX13-201ENST00000409076 BMP2KLQ5H9B9 411 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 GCC1Q96CN9 775 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 MYO5CQ9NQX4 1742 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 UQCRHLA0A096LP55 91 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 UQCRHP07919 91 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
SNX13-201ENST00000409076 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
SNX13-201ENST00000409076 FCHSD2O94868 740 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.78
SNX13-201ENST00000409076 FGD1P98174 961 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 USP25Q9UHP3 1055 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 CAMK4Q16566 473 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 STK11IPQ8N1F8 1099 aa10.15□□□□□ -0.78
SNX13-201ENST00000409076 NPHP1O15259 732 aa10.15□□□□□ -0.79
SNX13-201ENST00000409076 CLCN1P35523 988 aa10.15□□□□□ -0.79
SNX13-201ENST00000409076 PALD1Q9ULE6 856 aa10.15□□□□□ -0.79
SNX13-201ENST00000409076 LRRFIP2Q9Y608 721 aaKnown RBP10.15□□□□□ -0.79
SNX13-201ENST00000409076 CD109Q6YHK3 1445 aa10.15□□□□□ -0.79
SNX13-201ENST00000409076 MCCP23508 829 aa10.14□□□□□ -0.79
SNX13-201ENST00000409076 TTC22Q5TAA0 569 aa10.14□□□□□ -0.79
SNX13-201ENST00000409076 FAM173BQ6P4H8 233 aa10.14□□□□□ -0.79
SNX13-201ENST00000409076 ZNF592Q92610 1267 aa10.14□□□□□ -0.79
SNX13-201ENST00000409076 PPIP5K1Q6PFW1 1433 aa10.14□□□□□ -0.79
SNX13-201ENST00000409076 CLTCL1P53675 1640 aa10.14□□□□□ -0.79
SNX13-201ENST00000409076 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
SNX13-201ENST00000409076 SKOR2Q2VWA4 1001 aaPredicted RBP10.14□□□□□ -0.79
SNX13-201ENST00000409076 TTC12Q9H892 705 aaPredicted RBP10.14□□□□□ -0.79
SNX13-201ENST00000409076 HMMRO75330 724 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 MAPK8IP2Q13387 824 aaPredicted RBP10.13□□□□□ -0.79
SNX13-201ENST00000409076 RABEP1Q15276 862 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
SNX13-201ENST00000409076 ANKRD36BQ8N2N9 1353 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 REC8O95072 547 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 NLRP6P59044 892 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 EIF2AK4Q9P2K8 1649 aaKnown RBP10.13□□□□□ -0.79
SNX13-201ENST00000409076 NINLQ9Y2I6 1382 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 RTEL1-TNFRSF6BF6WH68 1400 aa10.13□□□□□ -0.79
SNX13-201ENST00000409076 ERC2O15083 957 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 MSH6P52701 1360 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 NUCB2P80303 420 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 NECAB1Q8N987 351 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 KIF2CQ99661 725 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 E9PCH4 1651 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 KDM5AP29375 1690 aaKnown RBP10.12□□□□□ -0.79
SNX13-201ENST00000409076 A0A0U1RQG5 324 aaPredicted RBP10.12□□□□□ -0.79
SNX13-201ENST00000409076 HCLS1P14317 486 aaPredicted RBP10.12□□□□□ -0.79
SNX13-201ENST00000409076 UNC5CLQ8IV45 518 aa10.12□□□□□ -0.79
SNX13-201ENST00000409076 CCDC83Q8IWF9 413 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms