RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
KDM3A-202ENST00000409064 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
KDM3A-202ENST00000409064 TRIM44Q96DX7 344 aaPredicted RBP12.31□□□□□ -0.44
KDM3A-202ENST00000409064 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
KDM3A-202ENST00000409064 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
KDM3A-202ENST00000409064 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
KDM3A-202ENST00000409064 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
KDM3A-202ENST00000409064 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
KDM3A-202ENST00000409064 FBLN1P23142 703 aa12.3□□□□□ -0.44
KDM3A-202ENST00000409064 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
KDM3A-202ENST00000409064 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
KDM3A-202ENST00000409064 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
KDM3A-202ENST00000409064 KDM6BO15054 1643 aa12.29□□□□□ -0.44
KDM3A-202ENST00000409064 CPLX1O14810 134 aa12.29□□□□□ -0.44
KDM3A-202ENST00000409064 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
KDM3A-202ENST00000409064 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
KDM3A-202ENST00000409064 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
KDM3A-202ENST00000409064 ERICH2A1L162 156 aa12.29□□□□□ -0.44
KDM3A-202ENST00000409064 GLIPR1L2Q4G1C9 344 aa12.29□□□□□ -0.44
KDM3A-202ENST00000409064 PZPP20742 1482 aa12.29□□□□□ -0.44
KDM3A-202ENST00000409064 SF3A1Q15459 793 aaKnown RBP12.28□□□□□ -0.44
KDM3A-202ENST00000409064 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 RFC4P35249 363 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
KDM3A-202ENST00000409064 FAM184AQ8NB25 1140 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 IL27Q8NEV9 243 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 ITSN2Q9NZM3 1697 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
KDM3A-202ENST00000409064 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.44
KDM3A-202ENST00000409064 ATP2B2Q01814 1243 aa12.27□□□□□ -0.44
KDM3A-202ENST00000409064 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.44
KDM3A-202ENST00000409064 ST18O60284 1047 aa12.27□□□□□ -0.45
KDM3A-202ENST00000409064 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
KDM3A-202ENST00000409064 TAF7Q15545 349 aaPredicted RBP12.27□□□□□ -0.45
KDM3A-202ENST00000409064 ORAI2Q96SN7 254 aa12.27□□□□□ -0.45
KDM3A-202ENST00000409064 BTG4Q9NY30 223 aa12.27□□□□□ -0.45
KDM3A-202ENST00000409064 CEP126Q9P2H0 1117 aa12.27□□□□□ -0.45
KDM3A-202ENST00000409064 NRDCO43847 1150 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 GPTP24298 496 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 CCDC158Q5M9N0 1113 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 ATP10AO60312 1499 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 H3BQV1 296 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
KDM3A-202ENST00000409064 GNAI2P04899 355 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 RNF20Q5VTR2 975 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 CREBRFQ8IUR6 639 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.451e-7■□□□□ 8.8
KDM3A-202ENST00000409064 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
KDM3A-202ENST00000409064 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
KDM3A-202ENST00000409064 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 GOLGA6L6A8MZA4 724 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 RPGRQ92834 1020 aaKnown RBP12.25□□□□□ -0.45
KDM3A-202ENST00000409064 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
KDM3A-202ENST00000409064 CHAF1AQ13111 956 aaPredicted RBP12.24□□□□□ -0.45
KDM3A-202ENST00000409064 TTC39AQ5SRH9 613 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
KDM3A-202ENST00000409064 DUSP27Q5VZP5 1158 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 MCTP1Q6DN14 999 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
KDM3A-202ENST00000409064 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 KIAA0556O60303 1618 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 GCP02774 474 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 ARHGEF12Q9NZN5 1544 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 REC8O95072 547 aa12.24□□□□□ -0.45
KDM3A-202ENST00000409064 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
KDM3A-202ENST00000409064 PARD3Q8TEW0 1356 aa12.23□□□□□ -0.45
KDM3A-202ENST00000409064 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
KDM3A-202ENST00000409064 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
KDM3A-202ENST00000409064 TRIM29Q14134 588 aa12.23□□□□□ -0.45
KDM3A-202ENST00000409064 ABCF2Q9UG63 623 aa12.23□□□□□ -0.45
KDM3A-202ENST00000409064 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
KDM3A-202ENST00000409064 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
KDM3A-202ENST00000409064 CCT4P50991 539 aaKnown RBP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 RRP12Q5JTH9 1297 aaKnown RBP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 CCDC43Q96MW1 224 aaKnown RBP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 SRGAP3O43295 1099 aa12.22□□□□□ -0.45
KDM3A-202ENST00000409064 IL2RBP14784 551 aa12.22□□□□□ -0.45
KDM3A-202ENST00000409064 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
KDM3A-202ENST00000409064 FKBP4Q02790 459 aaKnown RBP eCLIP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 DUOX2Q9NRD8 1548 aa12.22□□□□□ -0.45
KDM3A-202ENST00000409064 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 C20orf194Q5TEA3 1177 aa12.22□□□□□ -0.45
KDM3A-202ENST00000409064 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
KDM3A-202ENST00000409064 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
KDM3A-202ENST00000409064 POLD1P28340 1107 aa12.21□□□□□ -0.45
KDM3A-202ENST00000409064 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
KDM3A-202ENST00000409064 STK11IPQ8N1F8 1099 aa12.21□□□□□ -0.45
KDM3A-202ENST00000409064 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
KDM3A-202ENST00000409064 MYD88Q99836 296 aa12.21□□□□□ -0.46
KDM3A-202ENST00000409064 RAI14Q9P0K7 980 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms