RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 TWISTNBQ3B726 338 aaPredicted RBP21.37■■□□□ 1.01
PACSIN2-205ENST00000407585 CALD1Q05682 793 aaKnown RBP21.37■■□□□ 1.01
PACSIN2-205ENST00000407585 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
PACSIN2-205ENST00000407585 ANP32BQ92688 251 aaKnown RBP21.36■■□□□ 1.01
PACSIN2-205ENST00000407585 STAG3Q9UJ98 1225 aa21.36■■□□□ 1.01
PACSIN2-205ENST00000407585 POGZQ7Z3K3 1410 aa21.35■■□□□ 1.01
PACSIN2-205ENST00000407585 EMILIN1Q9Y6C2 1016 aa21.35■■□□□ 1.01
PACSIN2-205ENST00000407585 ARHGAP45Q92619 1136 aa21.35■■□□□ 1.01
PACSIN2-205ENST00000407585 NEXMIFQ5QGS0 1516 aa21.34■■□□□ 1.01
PACSIN2-205ENST00000407585 HSP90AA2PQ14568 343 aaPredicted RBP21.34■■□□□ 1.01
PACSIN2-205ENST00000407585 FRMPD1Q5SYB0 1578 aa21.34■■□□□ 1.01
PACSIN2-205ENST00000407585 NASPP49321 788 aaPredicted RBP21.34■■□□□ 1.01
PACSIN2-205ENST00000407585 MCTP1Q6DN14 999 aa21.33■■□□□ 1.01
PACSIN2-205ENST00000407585 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
PACSIN2-205ENST00000407585 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1
PACSIN2-205ENST00000407585 BAG4O95429 457 aaKnown RBP21.32■■□□□ 1
PACSIN2-205ENST00000407585 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
PACSIN2-205ENST00000407585 LRRC7Q96NW7 1537 aa21.32■■□□□ 1
PACSIN2-205ENST00000407585 GSPT1P15170 499 aaKnown RBP21.32■■□□□ 1
PACSIN2-205ENST00000407585 BRPF1P55201 1214 aaPredicted RBP21.32■■□□□ 1
PACSIN2-205ENST00000407585 DCTN1Q14203 1278 aa21.32■■□□□ 1
PACSIN2-205ENST00000407585 FAM83GA6ND36 823 aa21.32■■□□□ 1
PACSIN2-205ENST00000407585 IFT57Q9NWB7 429 aa21.32■■□□□ 1
PACSIN2-205ENST00000407585 SLC52A1Q9NWF4 448 aa21.32■■□□□ 1
PACSIN2-205ENST00000407585 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
PACSIN2-205ENST00000407585 API5Q9BZZ5 524 aaKnown RBP21.31■■□□□ 1
PACSIN2-205ENST00000407585 CD163L1Q9NR16 1453 aa21.31■■□□□ 1
PACSIN2-205ENST00000407585 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
PACSIN2-205ENST00000407585 GLIPR1L2Q4G1C9 344 aa21.3■■□□□ 1
PACSIN2-205ENST00000407585 WAPLQ7Z5K2 1190 aa21.3■■□□□ 1
PACSIN2-205ENST00000407585 MED14O60244 1454 aa21.3■■□□□ 1
PACSIN2-205ENST00000407585 PLEKHM2Q8IWE5 1019 aa21.3■■□□□ 1
PACSIN2-205ENST00000407585 YTHDC2Q9H6S0 1430 aaKnown RBP21.3■■□□□ 1
PACSIN2-205ENST00000407585 ABCC4O15439 1325 aa21.3■■□□□ 1
PACSIN2-205ENST00000407585 MLH3Q9UHC1 1453 aa21.3■■□□□ 1
PACSIN2-205ENST00000407585 FAM135BQ49AJ0 1406 aa21.29■■□□□ 1
PACSIN2-205ENST00000407585 ZFYVE9O95405 1425 aa21.29■■□□□ 1
PACSIN2-205ENST00000407585 RABEP1Q15276 862 aa21.28■■□□□ 1
PACSIN2-205ENST00000407585 CAVIN1Q6NZI2 390 aaKnown RBP21.28■■□□□ 1
PACSIN2-205ENST00000407585 ZRANB1Q9UGI0 708 aa21.28■■□□□ 1
PACSIN2-205ENST00000407585 CCDC173Q0VFZ6 552 aa21.27■■□□□ 1
PACSIN2-205ENST00000407585 KLHL40Q2TBA0 621 aa21.27■■□□□ 1
PACSIN2-205ENST00000407585 PTPRMP28827 1452 aa21.27■■□□□ 1
PACSIN2-205ENST00000407585 SIGLEC1Q9BZZ2 1709 aa21.27■■□□□ 1
PACSIN2-205ENST00000407585 PTCH1Q13635 1447 aa21.27■■□□□ 1
PACSIN2-205ENST00000407585 NME9Q86XW9 330 aa21.27■□□□□ 0.99
PACSIN2-205ENST00000407585 OTUD7AQ8TE49 926 aaPredicted RBP21.27■□□□□ 0.99
PACSIN2-205ENST00000407585 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
PACSIN2-205ENST00000407585 TTC22Q5TAA0 569 aa21.26■□□□□ 0.99
PACSIN2-205ENST00000407585 SMARCA5O60264 1052 aaPredicted RBP21.25■□□□□ 0.99
PACSIN2-205ENST00000407585 RRS1Q15050 365 aaKnown RBP21.25■□□□□ 0.99
PACSIN2-205ENST00000407585 CFAP44Q96MT7 982 aa21.25■□□□□ 0.99
PACSIN2-205ENST00000407585 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
PACSIN2-205ENST00000407585 PKP1Q13835 747 aa21.25■□□□□ 0.99
PACSIN2-205ENST00000407585 INTS3Q68E01 1043 aaKnown RBP21.25■□□□□ 0.99
PACSIN2-205ENST00000407585 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
PACSIN2-205ENST00000407585 IL13P35225 146 aa21.24■□□□□ 0.99
PACSIN2-205ENST00000407585 NUCB2P80303 420 aa21.24■□□□□ 0.99
PACSIN2-205ENST00000407585 CASC1Q6TDU7 716 aa21.24■□□□□ 0.99
PACSIN2-205ENST00000407585 DCTPP1Q9H773 170 aa21.24■□□□□ 0.99
PACSIN2-205ENST00000407585 ZNF853P0CG23 659 aa21.23■□□□□ 0.99
PACSIN2-205ENST00000407585 MSNP26038 577 aaKnown RBP21.23■□□□□ 0.99
PACSIN2-205ENST00000407585 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
PACSIN2-205ENST00000407585 FOXD4L5Q5VV16 416 aaPredicted RBP21.23■□□□□ 0.99
PACSIN2-205ENST00000407585 FOXD4L4Q8WXT5 416 aaPredicted RBP21.23■□□□□ 0.99
PACSIN2-205ENST00000407585 USP26Q9BXU7 913 aa21.23■□□□□ 0.99
PACSIN2-205ENST00000407585 RRP9O43818 475 aaKnown RBP21.22■□□□□ 0.99
PACSIN2-205ENST00000407585 PRPF40AO75400 957 aaKnown RBP21.21■□□□□ 0.99
PACSIN2-205ENST00000407585 VSIG10Q8N0Z9 540 aa21.21■□□□□ 0.99
PACSIN2-205ENST00000407585 PIK3C2BO00750 1634 aa21.21■□□□□ 0.99
PACSIN2-205ENST00000407585 ST18O60284 1047 aa21.2■□□□□ 0.99
PACSIN2-205ENST00000407585 SDSP20132 328 aa21.2■□□□□ 0.99
PACSIN2-205ENST00000407585 ZSCAN30Q86W11 494 aa21.2■□□□□ 0.99
PACSIN2-205ENST00000407585 ZGPATQ8N5A5 531 aaKnown RBP21.2■□□□□ 0.99
PACSIN2-205ENST00000407585 KIAA1211Q6ZU35 1233 aa21.2■□□□□ 0.98
PACSIN2-205ENST00000407585 ZSCAN23Q3MJ62 389 aa21.19■□□□□ 0.98
PACSIN2-205ENST00000407585 AK9Q5TCS8 1911 aa21.19■□□□□ 0.98
PACSIN2-205ENST00000407585 COG3Q96JB2 828 aa21.19■□□□□ 0.98
PACSIN2-205ENST00000407585 PPP1R9BQ96SB3 815 aa21.19■□□□□ 0.98
PACSIN2-205ENST00000407585 CLEC17AQ6ZS10 378 aa21.18■□□□□ 0.98
PACSIN2-205ENST00000407585 ANKRD44Q8N8A2 993 aa21.18■□□□□ 0.98
PACSIN2-205ENST00000407585 CHAMP1Q96JM3 812 aa21.18■□□□□ 0.98
PACSIN2-205ENST00000407585 RBM27Q9P2N5 1060 aaKnown RBP21.18■□□□□ 0.98
PACSIN2-205ENST00000407585 LMBRD1Q9NUN5 540 aa21.18■□□□□ 0.98
PACSIN2-205ENST00000407585 ANKRD26Q9UPS8 1709 aa21.17■□□□□ 0.98
PACSIN2-205ENST00000407585 NCKAP5LQ9HCH0 1330 aa21.17■□□□□ 0.98
PACSIN2-205ENST00000407585 RIMS2Q9UQ26 1411 aa21.16■□□□□ 0.98
PACSIN2-205ENST00000407585 ARHGEF40Q8TER5 1519 aa21.16■□□□□ 0.98
PACSIN2-205ENST00000407585 CEP85Q6P2H3 762 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 SLC4A10Q6U841 1118 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 MCM10Q7L590 875 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 RPAP2Q8IXW5 612 aaPredicted RBP21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 MEIS3Q99687 375 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 RBSNQ9H1K0 784 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 REC8O95072 547 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 AEBP1Q8IUX7 1158 aa21.15■□□□□ 0.98
PACSIN2-205ENST00000407585 TPM2P07951 284 aa21.14■□□□□ 0.98
PACSIN2-205ENST00000407585 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.98
PACSIN2-205ENST00000407585 ZNF445P59923 1031 aa21.14■□□□□ 0.97
PACSIN2-205ENST00000407585 SULT6B1Q6IMI4 303 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms